Ogr11405 (Ophisaurus gracilis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Ogr11405 T047532_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tcf12
M01740_2.00 		Mus musculus
NVCAYCTGB
VCAGRTGBN		 PBM
Weirauch et al.(2014)
pTH5071 		0.914 1.000
TCF12
M04137_2.00 		Homo sapiens
VCACSTGB
VCASGTGB		 SELEX
Yin et al.(2017)
TCF12_eDBD_HT-SELEX 		0.914 1.000
Tcf12
M08062_2.00 		Mus musculus
RRCAGCTGNNN
NNNCAGCTGYY		 ChIP-seq
Mathelier et al.(2014)
MA0521.1 		0.914 1.000
TCF12
M07805_2.00 		Homo sapiens
NVDSCAGSTGB
VCASCTGSHBN		 ChIP-seq
Gerstein et al.(2012)
GM12878_TCF12_HudsonAlpha 		0.914 1.000
TCF12
M07806_2.00 		Homo sapiens
VCASCTGB
VCAGSTGB		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_TCF12_HudsonAlpha 		0.914 1.000
TCF12
M08731_2.00 		Homo sapiens
CMCASCTGSH
DSCAGSTGKG		 Misc
Kulakovskiy et al.(2013)
HTF4_HUMAN.H11MO.0.A 		0.914 1.000
Tcf12
M08762_2.00 		Mus musculus
VMCASCTGSH
DSCAGSTGKB		 Misc
Kulakovskiy et al.(2013)
HTF4_MOUSE.H11MO.0.A 		0.914 1.000
TCF12
M09458_2.00 		Homo sapiens
NNVCAGCTGB
VCAGCTGBNN		 Misc
Heinz et al.(2010)
GM12878-Tcf12_GSE32465 		0.914 1.000
TCF12
M09858_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HEB_Q6 		0.914 1.000
TCF12
M09859_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HTF4_Q2 		0.914 1.000
TCF12
M09860_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF12_01 		0.914 1.000
TCF12
M09861_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF12_03 		0.914 1.000
TCF12
M09862_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF12_05 		0.914 1.000
TCF12
M04138_2.00 		Homo sapiens
NCAYCTGN
NCAGRTGN		 SELEX
Yin et al.(2017)
TCF12_eDBD_Methyl-HT-SELEX 		0.914 1.000
Tcf3
M00753_2.00 		Mus musculus
VCACCTGBN
NVCAGGTGB		 PBM
Weirauch et al.(2013)
pTH3866 		0.914 0.885
Tcf3
M01723_2.00 		Mus musculus
NNVCACSTGB
VCASGTGBNN		 PBM
Weirauch et al.(2014)
pTH4580 		0.914 0.885
Tcf3
M00118_2.00 		Mus musculus
VCAYCTGB
VCAGRTGB		 PBM
Badis et al.(2009)
Tcfe2a_3865 		0.914 0.885
Tcf4
M01750_2.00 		Mus musculus
VCAGVTGBN
NVCABCTGB		 PBM
Weirauch et al.(2014)
pTH5101 		0.912 0.962
TCF4
M02807_2.00 		Homo sapiens
HRCACCTGBN
NVCAGGTGYD		 SELEX
Jolma et al.(2013)
TCF4_1 		0.912 0.962
TCF4
M02808_2.00 		Homo sapiens
NVCACCTBBN
NVVAGGTGBN		 SELEX
Jolma et al.(2013)
TCF4_2 		0.912 0.962
TCF4
M02728_2.00 		Homo sapiens
RCACCTG
CAGGTGY		 SELEX
Jolma et al.(2010)
TCF4_dimer 		0.912 0.962
TCF4
M04214_2.00 		Homo sapiens
VCACCTGB
VCAGGTGB		 SELEX
Yin et al.(2017)
TCF4_eDBD_HT-SELEX 		0.912 0.962
Tcf4
M08775_2.00 		Mus musculus
HRCACCTGB
VCAGGTGYD		 Misc
Kulakovskiy et al.(2013)
ITF2_MOUSE.H11MO.0.B 		0.912 0.962
TCF4
M09461_2.00 		Homo sapiens
ASWTCAAAGRVN
NBYCTTTGAWST		 Misc
Heinz et al.(2010)
Hct116-Tcf4_SRA012054 		0.912 0.962
TCF4
M04215_2.00 		Homo sapiens
VCACCTGN
NCAGGTGB		 SELEX
Yin et al.(2017)
TCF4_eDBD_Methyl-HT-SELEX 		0.912 0.962
Tcf3
M09465_2.00 		Mus musculus
ABWTCAAAGS
SCTTTGAWVT		 Misc
Heinz et al.(2010)
mES-Tcf3_GSE11724 		0.886 0.962
Tcf3
M09466_2.00 		Mus musculus
VCAGCTGBNN
NNVCAGCTGB		 Misc
Heinz et al.(2010)
proBcell-E2A_GSE21978 		0.886 0.962
Tcf3
M09886_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E47_05 		0.886 0.962
TCF3
M02775_2.00 		Homo sapiens
NVCACCTGBN
NVCAGGTGBN		 SELEX
Jolma et al.(2013)
TCF3_1 		0.886 0.923
TCF3
M08710_2.00 		Homo sapiens
VVCASCTGCHN
NDGCAGSTGBB		 Misc
Kulakovskiy et al.(2013)
TFE2_HUMAN.H11MO.0.A 		0.886 0.923
TCF3
M09791_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E12_Q6 		0.886 0.923
TCF3
M09792_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E2A_Q6_01 		0.886 0.923
TCF3
M09793_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E2A_Q6_02 		0.886 0.923
TCF3
M09794_2.00 		Homo sapiens
VVVVMCACCTGCNBB
VVNGCAGGTGKBBBB		 Transfac
Matys et al.(2006)
V$E47_01 		0.886 0.923
TCF3
M09795_2.00 		Homo sapiens
NNKWRCACCTGYDNNN
NNNHRCAGGTGYWMNN		 Transfac
Matys et al.(2006)
V$E47_02 		0.886 0.923
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ogr11405 bHLH 519 572

Links

Other bHLH family TFs
Other Ophisaurus gracilis TFs

212 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SATB1 Homo sapiens ENSG00000182568 D
SATB1 Anolis carolinensis ENSACAG00000007941 I
SATB2 Anolis carolinensis ENSACAG00000009821 I
ENSAMEG00000005350 Ailuropoda melanoleuca ENSAMEG00000005350 I
ENSAMXG00000002186 Astyanax mexicanus ENSAMXG00000002186 I
ENSAMXG00000015155 Astyanax mexicanus ENSAMXG00000015155 I
ENSAPLG00000008131 Anas platyrhynchos ENSAPLG00000008131 I
ENSAPLG00000009362 Anas platyrhynchos ENSAPLG00000009362 I
SATB2 Bos taurus ENSBTAG00000016334 I
SATB1 Bos taurus ENSBTAG00000021158 I
SATB2 Canis familiaris ENSCAFG00000010971 I
SATB1 Choloepus hoffmanni ENSCHOG00000002142 I
SATB2 Choloepus hoffmanni ENSCHOG00000012005 I
SATB1 Callithrix jacchus ENSCJAG00000003645 I
SATB2 Callithrix jacchus ENSCJAG00000004111 I
SATB1 Cavia porcellus ENSCPOG00000007101 I
SATB2 Cavia porcellus ENSCPOG00000015198 I
ENSCSAG00000011380 Chlorocebus sabaeus ENSCSAG00000011380 I
satb2 Danio rerio ENSDARG00000061885 I
satb1b Danio rerio ENSDARG00000062621 I
SATB2 Dasypus novemcinctus ENSDNOG00000001292 I
SATB1 Dasypus novemcinctus ENSDNOG00000025323 I
Satb1 Dipodomys ordii ENSDORG00000005578 I
SATB2 Equus caballus ENSECAG00000010043 I
SATB1 Equus caballus ENSECAG00000023585 I
SATB1 Erinaceus europaeus ENSEEUG00000010435 I
ENSFALG00000004242 Ficedula albicollis ENSFALG00000004242 I
ENSFALG00000009258 Ficedula albicollis ENSFALG00000009258 I
SATB1 Felis catus ENSFCAG00000004295 I
SATB2 Felis catus ENSFCAG00000015781 I
SATB2 Homo sapiens ENSG00000119042 I
SATB2 Gasterosteus aculeatus ENSGACG00000009037 I
satb1b Gasterosteus aculeatus ENSGACG00000013013 I
satb2 Gasterosteus aculeatus ENSGACG00000014437 I
SATB2 Gallus gallus ENSGALG00000008135 I
SATB1 Gallus gallus ENSGALG00000011254 I
SATB1 Gorilla gorilla ENSGGOG00000001779 I
SATB2 Gorilla gorilla ENSGGOG00000014123 I
ENSGMOG00000006865 Gadus morhua ENSGMOG00000006865 I
ENSGMOG00000013657 Gadus morhua ENSGMOG00000013657 I
ENSLACG00000005399 Latimeria chalumnae ENSLACG00000005399 I
ENSLACG00000017798 Latimeria chalumnae ENSLACG00000017798 I
SATB2 Loxodonta africana ENSLAFG00000002924 I
SATB1 Loxodonta africana ENSLAFG00000009015 I
ENSLOCG00000004032 Lepisosteus oculatus ENSLOCG00000004032 I
ENSLOCG00000006524 Lepisosteus oculatus ENSLOCG00000006524 I
SATB2 Meleagris gallopavo ENSMGAG00000007173 I
SATB1 Meleagris gallopavo ENSMGAG00000010929 I
SATB2 Microcebus murinus ENSMICG00000009378 I
SATB1 Microcebus murinus ENSMICG00000017153 I
SATB2 Myotis lucifugus ENSMLUG00000001554 I
SATB1 Myotis lucifugus ENSMLUG00000001860 I
ENSMMUG00000019009 Macaca mulatta ENSMMUG00000019009 I
SATB2 Monodelphis domestica ENSMODG00000012352 I
SATB1 Monodelphis domestica ENSMODG00000014765 I
ENSMPUG00000001406 Mustela putorius furo ENSMPUG00000001406 I
ENSMPUG00000007972 Mustela putorius furo ENSMPUG00000007972 I
Satb1 Mus musculus ENSMUSG00000023927 I
Satb2 Mus musculus ENSMUSG00000038331 I
ENSNLEG00000000912 Nomascus leucogenys ENSNLEG00000000912 I
ENSNLEG00000006893 Nomascus leucogenys ENSNLEG00000006893 I
ENSOANG00000004992 Ornithorhynchus anatinus ENSOANG00000004992 I
ENSOARG00000015604 Ovis aries ENSOARG00000015604 I
ENSOARG00000015783 Ovis aries ENSOARG00000015783 I
SATB1 Oryctolagus cuniculus ENSOCUG00000007174 I
SATB2 Oryctolagus cuniculus ENSOCUG00000009700 I
SATB2 Otolemur garnettii ENSOGAG00000006949 I
SATB1 Otolemur garnettii ENSOGAG00000015441 I
ENSONIG00000008688 Oreochromis niloticus ENSONIG00000008688 I
ENSONIG00000013780 Oreochromis niloticus ENSONIG00000013780 I
ENSONIG00000015271 Oreochromis niloticus ENSONIG00000015271 I
SATB2 Ochotona princeps ENSOPRG00000003979 I
ENSPANG00000011212 Papio anubis ENSPANG00000011212 I
SATB1 Procavia capensis ENSPCAG00000008567 I
SATB2 Procavia capensis ENSPCAG00000012822 I
ENSPFOG00000000642 Poecilia formosa ENSPFOG00000000642 I
ENSPFOG00000003900 Poecilia formosa ENSPFOG00000003900 I
ENSPFOG00000004509 Poecilia formosa ENSPFOG00000004509 I
ENSPFOG00000005488 Poecilia formosa ENSPFOG00000005488 I
ENSPMAG00000005314 Petromyzon marinus ENSPMAG00000005314 I
ENSPPYG00000013052 Pongo abelii ENSPPYG00000013052 I
ENSPPYG00000014077 Pongo abelii ENSPPYG00000014077 I
ENSPSIG00000018044 Pelodiscus sinensis ENSPSIG00000018044 I
SATB2 Pan troglodytes ENSPTRG00000012779 I
SATB1 Pan troglodytes ENSPTRG00000014677 I
SATB2 Pteropus vampyrus ENSPVAG00000012029 I
Satb2 Rattus norvegicus ENSRNOG00000010188 I
Satb1 Rattus norvegicus ENSRNOG00000012942 I
SATB2 Sorex araneus ENSSARG00000014343 I
ENSSHAG00000011077 Sarcophilus harrisii ENSSHAG00000011077 I
ENSSHAG00000015368 Sarcophilus harrisii ENSSHAG00000015368 I
SATB1 Sus scrofa ENSSSCG00000011201 I
SATB2 Tupaia belangeri ENSTBEG00000002443 I
SATB1 Taeniopygia guttata ENSTGUG00000003198 I
SATB2 Taeniopygia guttata ENSTGUG00000010480 I
SATB2 Tetraodon nigroviridis ENSTNIG00000005271 I
satb2 Tetraodon nigroviridis ENSTNIG00000014467 I
satb2 Takifugu rubripes ENSTRUG00000005073 I
SATB2 Takifugu rubripes ENSTRUG00000015384 I
ENSTSYG00000005284 Tarsius syrichta ENSTSYG00000005284 I
SATB1 Tursiops truncatus ENSTTRG00000006209 I
ENSXMAG00000000865 Xiphophorus maculatus ENSXMAG00000000865 I
ENSXMAG00000004215 Xiphophorus maculatus ENSXMAG00000004215 I
ENSXMAG00000007412 Xiphophorus maculatus ENSXMAG00000007412 I
ENSXMAG00000018662 Xiphophorus maculatus ENSXMAG00000018662 I
Aan_R006754 Calypte anna Aan_R006754 I
Aan_R010578 Calypte anna Aan_R010578 I
Afo_R004114 Aptenodytes forsteri Afo_R004114 I
Afo_R015456 Aptenodytes forsteri Afo_R015456 I
Brh_R001953 Buceros rhinoceros Brh_R001953 I
ENSP00000333367 Macaca fascicularis ENSP00000333367 I
ENSP00000401112-D1 Bos grunniens ENSP00000401112-D1 I
ENSP00000405420 Macaca fascicularis ENSP00000405420 I
Gfo_R001489 Geospiza fortis Gfo_R001489 I
Myotis_brandtii_Satb1_10034564 Myotis brandtii Myotis_brandtii_Satb1_10034564 I
Myotis_brandtii_Satb2_10019975 Myotis brandtii Myotis_brandtii_Satb2_10019975 I
Ogr08410 Ophisaurus gracilis Ogr08410 I
Ogr08679 Ophisaurus gracilis Ogr08679 I
Pvit_10645 Pogona vitticeps Pvit_10645 I
Pvit_16605 Pogona vitticeps Pvit_16605 I
Tal_R006309 Tyto alba Tal_R006309 I
satb2 Xenopus tropicalis XB-GENE-5822252 I
satb1 Xenopus tropicalis XB-GENE-854103 I