Ogr16040 (Ophisaurus gracilis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Ogr16040 T047559_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ASCL1
M04135_2.00 		Homo sapiens
NRCASSTGYN
NRCASSTGYN		 SELEX
Yin et al.(2017)
ASCL1_eDBD_HT-SELEX 		0.459 1.000
ASCL1
M08055_2.00 		Homo sapiens
NNRGCAGCTGSNN
NNSCAGCTGCYNN		 ChIP-seq
Mathelier et al.(2014)
MA1100.1 		0.459 1.000
ASCL1
M08730_2.00 		Homo sapiens
NNVCASCTGCYBYN
NRVRGCAGSTGBNN		 Misc
Kulakovskiy et al.(2013)
ASCL1_HUMAN.H11MO.0.A 		0.459 1.000
Ascl1
M08748_2.00 		Mus musculus
BHSCASCTGCYBBN
NVVRGCAGSTGSDV		 Misc
Kulakovskiy et al.(2013)
ASCL1_MOUSE.H11MO.0.A 		0.459 1.000
Ascl1
M09464_2.00 		Mus musculus
NVCABCTGBBNN
NNVVCAGVTGBN		 Misc
Heinz et al.(2010)
NeuralTubes-Ascl1_GSE55840 		0.459 1.000
ASCL1
M09855_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MASH1_Q6_01 		0.459 1.000
ASCL1
M09856_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MASH1_Q6_02 		0.459 1.000
ASCL1
M09857_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MASH1_Q6 		0.459 1.000
ASCL1
M04136_2.00 		Homo sapiens
NRCAGCTGYN
NRCAGCTGYN		 SELEX
Yin et al.(2017)
ASCL1_eDBD_Methyl-HT-SELEX 		0.459 1.000
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ogr16040 bHLH 1 18

Links

Other bHLH family TFs
Other Ophisaurus gracilis TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Myotis_brandtii_ASCL1_10010089 Myotis brandtii Myotis_brandtii_ASCL1_10010089 I 0.914
ENSAMXG00000024858 Astyanax mexicanus ENSAMXG00000024858 I 0.459
ascl1b Danio rerio ENSDARG00000101628 I 0.459
ascl1b Gasterosteus aculeatus ENSGACG00000011375 I 0.459
ENSGMOG00000009589 Gadus morhua ENSGMOG00000009589 I 0.459
ENSLOCG00000017318 Lepisosteus oculatus ENSLOCG00000017318 I 0.459
ENSONIG00000020440 Oreochromis niloticus ENSONIG00000020440 I 0.459
ascl1b Oryzias latipes ENSORLG00000012117 I 0.459
ENSPFOG00000020633 Poecilia formosa ENSPFOG00000020633 I 0.459
ascl1b Tetraodon nigroviridis ENSTNIG00000011380 I 0.459
ascl1b Takifugu rubripes ENSTRUG00000011651 I 0.459
ENSXMAG00000019890 Xiphophorus maculatus ENSXMAG00000019890 I 0.459