Pm019419 (Prunus mume)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Pm019419 T047630_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT4G25400
M09786_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT4G25400_01 		0.861 0.635
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm019419 bHLH 65 117

Links

Other bHLH family TFs
Other Prunus mume TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LjSGA_023375.1 Lotus japonicus LjSGA_023375.1 I 0.914
PK15358.1 Cannabis sativa PK15358.1 I 0.903
POPTR_0012s14080 Populus trichocarpa POPTR_0012s14080 I 0.902
cassava43207.valid.m1 Manihot esculenta cassava43207.valid.m1 I 0.902
Bostr.15774s0324 Boechera stricta Bostr.15774s0324 I 0.902
Cagra.0277s0021 Capsella grandiflora Cagra.0277s0021 I 0.902
Carubv10027166m.g Capsella rubella Carubv10027166m.g I 0.902
MDP0000246258 Malus domestica MDP0000246258 I 0.894
Solyc06g035490.2 Solanum lycopersicum Solyc06g035490.2 I 0.891
Ca_22233 Cicer arietinum Ca_22233 I 0.891
MTR_1g102370 Medicago truncatula MTR_1g102370 N 0.890
30147.m014147 Ricinus communis 30147.m014147 N 0.890
cassava45968.m1 Manihot esculenta cassava45968.m1 I 0.890
PK11667.1 Cannabis sativa PK11667.1 I 0.883
AT5G51780 Arabidopsis thaliana AT5G51780 I 0.882
Bo7g110280 Brassica oleracea Bo7g110280 I 0.882
fgenesh2_kg.8__1059__AT5G51780.1 Arabidopsis lyrata fgenesh2_kg.8__1059__AT5G51780.1 I 0.882
Thhalv10026341m.g Eutrema salsugineum Thhalv10026341m.g I 0.882
Thhalv10009922m.g Eutrema salsugineum Thhalv10009922m.g I 0.881
cassava21379.m1 Manihot esculenta cassava21379.m1 I 0.878
Ciclev10006628m.g Citrus clementina Ciclev10006628m.g I 0.878
orange1.1g036406m.g Citrus sinensis orange1.1g036406m.g I 0.878
TCM_016133 Theobroma cacao TCM_016133 I 0.875
TCM_016134 Theobroma cacao TCM_016134 I 0.875
GLYMA09G27610 Glycine max GLYMA09G27610 I 0.871
GLYMA16G32610 Glycine max GLYMA16G32610 I 0.871
Ciclev10006639m.g Citrus clementina Ciclev10006639m.g N 0.870
Bra019167 Brassica rapa Bra019167 I 0.869
Gorai.006G196500 Gossypium raimondii Gorai.006G196500 I 0.868
GLYMA09G27630 Glycine max GLYMA09G27630 N 0.867
GLYMA10G38630 Glycine max GLYMA10G38630 N 0.867
GLYMA20G29120 Glycine max GLYMA20G29120 N 0.867
MTR_0007s0380 Medicago truncatula MTR_0007s0380 N 0.867
AT4G25400 Arabidopsis thaliana AT4G25400 D 0.861
Bostr.7867s0349 Boechera stricta Bostr.7867s0349 I 0.861
Cagra.0568s0165 Capsella grandiflora Cagra.0568s0165 N 0.860
Carubv10011792m.g Capsella rubella Carubv10011792m.g N 0.860
Bra022562 Brassica rapa Bra022562 I 0.858
GLYMA16G32620 Glycine max GLYMA16G32620 N 0.856
Bostr.13671s0206 Boechera stricta Bostr.13671s0206 I 0.851
Bo2g048240 Brassica oleracea Bo2g048240 I 0.847
evm.TU.supercontig_4.179 Carica papaya evm.TU.supercontig_4.179 N 0.842
gene32346-v1.0-hybrid Fragaria vesca gene32346-v1.0-hybrid N 0.842
MTR_0007s0330 Medicago truncatula MTR_0007s0330 N 0.841
Gorai.008G282300 Gossypium raimondii Gorai.008G282300 I 0.841
gene13365-v1.0-hybrid Fragaria vesca gene13365-v1.0-hybrid N 0.839