30074.m001421 (Ricinus communis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 30074.m001421 T047892_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BHLH80
M06722_2.00 		Arabidopsis thaliana
DNCMACTTGCH
DGCAAGTKGNH		 Dap-seq
OMalley et al.(2016)
bHLH80_col_a 		0.858 0.933
BHLH80
M06723_2.00 		Arabidopsis thaliana
DKCMACTTGCA
TGCAAGTKGMH		 Dap-seq
OMalley et al.(2016)
bHLH80_colamp_a 		0.858 0.933
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
30074.m001421 bHLH 199 243

Links

Other bHLH family TFs
Other Ricinus communis TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PK14093.1 Cannabis sativa PK14093.1 I 0.870
BHLH80 Arabidopsis thaliana AT1G35460 D 0.858
BHLH81 Arabidopsis thaliana AT4G09180 I 0.858
Bo6g043840 Brassica oleracea Bo6g043840 I 0.858
Bo8g026850 Brassica oleracea Bo8g026850 I 0.858
Bra028088 Brassica rapa Bra028088 I 0.858
Bra036760 Brassica rapa Bra036760 I 0.858
fgenesh2_kg.6__2924__AT4G09180.1 Arabidopsis lyrata fgenesh2_kg.6__2924__AT4G09180.1 I 0.858
GLYMA08G26110 Glycine max GLYMA08G26110 I 0.858
PGSC0003DMG400031314 Solanum tuberosum PGSC0003DMG400031314 I 0.858
PRUPE_ppa011017mg Prunus persica PRUPE_ppa011017mg I 0.858
scaffold_103992.1 Arabidopsis lyrata scaffold_103992.1 I 0.858
Solyc06g065040.2 Solanum lycopersicum Solyc06g065040.2 I 0.858
TCM_036484 Theobroma cacao TCM_036484 I 0.858
VIT_18s0041g00690 Vitis vinifera VIT_18s0041g00690 I 0.858
Pm004181 Prunus mume Pm004181 I 0.858
cassava13743.valid.m1 Manihot esculenta cassava13743.valid.m1 I 0.858
Cucsa.061590 Cucumis sativus Cucsa.061590 I 0.858
mgf002701m Mimulus guttatus mgf002701m I 0.858
Bostr.1774s0027 Boechera stricta Bostr.1774s0027 I 0.858
Bostr.25463s0393 Boechera stricta Bostr.25463s0393 I 0.858
Cagra.18223s0002 Capsella grandiflora Cagra.18223s0002 I 0.858
Cagra.9781s0002 Capsella grandiflora Cagra.9781s0002 I 0.858
Carubv10001721m.g Capsella rubella Carubv10001721m.g I 0.858
Carubv10010050m.g Capsella rubella Carubv10010050m.g I 0.858
Ciclev10002083m.g Citrus clementina Ciclev10002083m.g I 0.858
gene26880-v1.0-hybrid Fragaria vesca gene26880-v1.0-hybrid I 0.858
Gorai.013G138300 Gossypium raimondii Gorai.013G138300 I 0.858
MDP0000269890 Malus domestica MDP0000269890 I 0.858
orange1.1g023215m.g Citrus sinensis orange1.1g023215m.g I 0.858
SapurV1A.0391s0050 Salix purpurea SapurV1A.0391s0050 I 0.858
SapurV1A.0690s0120 Salix purpurea SapurV1A.0690s0120 I 0.858
SapurV1A.1647s0020 Salix purpurea SapurV1A.1647s0020 I 0.858
Thhalv10028883m.g Eutrema salsugineum Thhalv10028883m.g I 0.858
PK06301.1 Cannabis sativa PK06301.1 I 0.858
AMTR_s00070p00149100 Amborella trichopoda AMTR_s00070p00149100 I 0.847
Bo5g085170 Brassica oleracea Bo5g085170 I 0.847
Bra034421 Brassica rapa Bra034421 I 0.847