cassava21379.m1 (Manihot esculenta)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 cassava21379.m1 T047990_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT4G25400
M09786_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT4G25400_01 		0.849 0.654
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava21379.m1 bHLH 68 120

Links

Other bHLH family TFs
Other Manihot esculenta TFs

42 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MTR_1g102370 Medicago truncatula MTR_1g102370 N 0.902
POPTR_0012s14080 Populus trichocarpa POPTR_0012s14080 I 0.890
cassava43207.valid.m1 Manihot esculenta cassava43207.valid.m1 I 0.890
Bostr.15774s0324 Boechera stricta Bostr.15774s0324 I 0.890
Cagra.0277s0021 Capsella grandiflora Cagra.0277s0021 I 0.890
Carubv10027166m.g Capsella rubella Carubv10027166m.g I 0.890
Ciclev10006628m.g Citrus clementina Ciclev10006628m.g I 0.890
orange1.1g036406m.g Citrus sinensis orange1.1g036406m.g I 0.890
Ciclev10006639m.g Citrus clementina Ciclev10006639m.g N 0.882
Solyc06g035490.2 Solanum lycopersicum Solyc06g035490.2 I 0.879
Pm019419 Prunus mume Pm019419 I 0.878
30147.m014147 Ricinus communis 30147.m014147 N 0.878
cassava45968.m1 Manihot esculenta cassava45968.m1 I 0.878
LjSGA_023375.1 Lotus japonicus LjSGA_023375.1 I 0.878
AT5G51780 Arabidopsis thaliana AT5G51780 I 0.870
Bo7g110280 Brassica oleracea Bo7g110280 I 0.870
Bra022562 Brassica rapa Bra022562 I 0.870
fgenesh2_kg.8__1059__AT5G51780.1 Arabidopsis lyrata fgenesh2_kg.8__1059__AT5G51780.1 I 0.870
Thhalv10026341m.g Eutrema salsugineum Thhalv10026341m.g I 0.870
evm.TU.supercontig_4.181 Carica papaya evm.TU.supercontig_4.181 I 0.868
Ca_22233 Cicer arietinum Ca_22233 I 0.867
PK15358.1 Cannabis sativa PK15358.1 I 0.867
TCM_016133 Theobroma cacao TCM_016133 I 0.862
TCM_016134 Theobroma cacao TCM_016134 I 0.862
Bo2g048240 Brassica oleracea Bo2g048240 I 0.859
MDP0000246258 Malus domestica MDP0000246258 I 0.858
Bra019167 Brassica rapa Bra019167 I 0.857
Thhalv10009922m.g Eutrema salsugineum Thhalv10009922m.g I 0.857
Gorai.006G196500 Gossypium raimondii Gorai.006G196500 I 0.856
GLYMA09G27630 Glycine max GLYMA09G27630 N 0.855
MTR_0007s0380 Medicago truncatula MTR_0007s0380 N 0.855
AT4G25400 Arabidopsis thaliana AT4G25400 D 0.849
Bostr.7867s0349 Boechera stricta Bostr.7867s0349 I 0.849
Cagra.0568s0165 Capsella grandiflora Cagra.0568s0165 N 0.848
Carubv10011792m.g Capsella rubella Carubv10011792m.g N 0.848
GLYMA09G27610 Glycine max GLYMA09G27610 I 0.847
GLYMA16G32610 Glycine max GLYMA16G32610 I 0.847
PK11667.1 Cannabis sativa PK11667.1 I 0.847
Eucgr.F04119 Eucalyptus grandis Eucgr.F04119 I 0.845
GLYMA16G32620 Glycine max GLYMA16G32620 N 0.844
Gorai.011G226600 Gossypium raimondii Gorai.011G226600 I 0.842
Lus10027394.g Linum usitatissimum Lus10027394.g N 0.842