cassava2779.m1 (Manihot esculenta)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 cassava2779.m1 T048016_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava2779.m1 bHLH 284 329

Links

Other bHLH family TFs
Other Manihot esculenta TFs

264 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PGSC0003DMG400004875 Solanum tuberosum PGSC0003DMG400004875 N 0.902
Solyc06g062460.2 Solanum lycopersicum Solyc06g062460.2 N 0.902
Eucgr.F03093 Eucalyptus grandis Eucgr.F03093 N 0.890
GLYMA13G42900 Glycine max GLYMA13G42900 N 0.879
GLYMA15G02531 Glycine max GLYMA15G02531 N 0.879
MTR_2g100490 Medicago truncatula MTR_2g100490 N 0.879
MTR_8g015450 Medicago truncatula MTR_8g015450 N 0.879
PRUPE_ppa015446mg Prunus persica PRUPE_ppa015446mg N 0.879
Solyc03g121240.1 Solanum lycopersicum Solyc03g121240.1 N 0.879
TCM_028961 Theobroma cacao TCM_028961 N 0.879
VIT_09s0002g02700 Vitis vinifera VIT_09s0002g02700 N 0.879
Ca_02767 Cicer arietinum Ca_02767 N 0.879
Pm030884 Prunus mume Pm030884 N 0.879
30146.m003443 Ricinus communis 30146.m003443 N 0.879
cassava34914.m1 Manihot esculenta cassava34914.m1 N 0.879
mgf023933m Mimulus guttatus mgf023933m N 0.879
Aquca_001_00189 Aquilegia coerulea Aquca_001_00189 N 0.879
evm.TU.supercontig_131.7 Carica papaya evm.TU.supercontig_131.7 N 0.879
gene22897-v1.0-hybrid Fragaria vesca gene22897-v1.0-hybrid N 0.879
Gorai.003G060900 Gossypium raimondii Gorai.003G060900 N 0.879
Gorai.011G069200 Gossypium raimondii Gorai.011G069200 N 0.879
Lus10003500.g Linum usitatissimum Lus10003500.g N 0.879
Lus10009745.g Linum usitatissimum Lus10009745.g N 0.879
MDP0000145937 Malus domestica MDP0000145937 N 0.879
MDP0000166245 Malus domestica MDP0000166245 N 0.879
orange1.1g020172m.g Citrus sinensis orange1.1g020172m.g N 0.879
PK21140.1 Cannabis sativa PK21140.1 N 0.879
BHLH87 Arabidopsis thaliana AT3G21330 N 0.876
Bo5g101160 Brassica oleracea Bo5g101160 N 0.876
Bra031275 Brassica rapa Bra031275 N 0.876
fgenesh2_kg.3__2354__AT3G21330.1 Arabidopsis lyrata fgenesh2_kg.3__2354__AT3G21330.1 N 0.876
GLYMA07G01611 Glycine max GLYMA07G01611 N 0.876
GLYMA08G21130 Glycine max GLYMA08G21130 N 0.876
Ca_10121 Cicer arietinum Ca_10121 N 0.876
Bostr.19424s0519 Boechera stricta Bostr.19424s0519 N 0.876
Cagra.1757s0024 Capsella grandiflora Cagra.1757s0024 N 0.876
Carubv10013989m.g Capsella rubella Carubv10013989m.g N 0.876
orange1.1g047850m.g Citrus sinensis orange1.1g047850m.g N 0.876
Thhalv10022273m.g Eutrema salsugineum Thhalv10022273m.g N 0.876
Bo3g078540 Brassica oleracea Bo3g078540 N 0.875
Bra001826 Brassica rapa Bra001826 N 0.875
AMTR_s00036p00178030 Amborella trichopoda AMTR_s00036p00178030 N 0.859
AMTR_s00071p00111940 Amborella trichopoda AMTR_s00071p00111940 N 0.859
POPTR_0001s19250 Populus trichocarpa POPTR_0001s19250 N 0.859
SapurV1A.2172s0010 Salix purpurea SapurV1A.2172s0010 N 0.859
chr3.CM1570.150.nc Lotus japonicus chr3.CM1570.150.nc N 0.859
Cla012836 Citrullus lanatus Cla012836 N 0.858
PGSC0003DMG400018986 Solanum tuberosum PGSC0003DMG400018986 N 0.855
Cla015855 Citrullus lanatus Cla015855 N 0.855
Cucsa.360770 Cucumis sativus Cucsa.360770 N 0.855
Ciclev10026976m.g Citrus clementina Ciclev10026976m.g N 0.855
BRADI2G47810 Brachypodium distachyon BRADI2G47810 N 0.846
AMTR_s00008p00265010 Amborella trichopoda AMTR_s00008p00265010 N 0.844
HEC2 Arabidopsis thaliana AT3G50330 N 0.844
HEC3 Arabidopsis thaliana AT5G09750 N 0.844
HEC1 Arabidopsis thaliana AT5G67060 N 0.844
BGIOSGA026828 Oryza indica BGIOSGA026828 N 0.844
BGIOSGA027780 Oryza indica BGIOSGA027780 N 0.844
BGIOSGA030896 Oryza indica BGIOSGA030896 N 0.844
Bo1g084640 Brassica oleracea Bo1g084640 N 0.844
Bo2g009510 Brassica oleracea Bo2g009510 N 0.844
Bo2g167880 Brassica oleracea Bo2g167880 N 0.844
Bo7g064100 Brassica oleracea Bo7g064100 N 0.844
Bo8g079710 Brassica oleracea Bo8g079710 N 0.844
Bo9g020420 Brassica oleracea Bo9g020420 N 0.844
Bo9g173860 Brassica oleracea Bo9g173860 N 0.844
Bra012128 Brassica rapa Bra012128 N 0.844
Bra028620 Brassica rapa Bra028620 N 0.844
Bra030002 Brassica rapa Bra030002 N 0.844
Bra036071 Brassica rapa Bra036071 N 0.844
Bra036801 Brassica rapa Bra036801 N 0.844
Bra037128 Brassica rapa Bra037128 N 0.844
BRADI3G13300 Brachypodium distachyon BRADI3G13300 N 0.844
BRADI3G38250 Brachypodium distachyon BRADI3G38250 N 0.844
BRADI4G32060 Brachypodium distachyon BRADI4G32060 N 0.844
F775_04427 Aegilops tauschii F775_04427 N 0.844
F775_52433 Aegilops tauschii F775_52433 N 0.844
HEC2 Arabidopsis lyrata fgenesh2_kg.5__1376__AT3G50330.1 N 0.844
HEC3 Arabidopsis lyrata fgenesh2_kg.6__929__AT5G09750.1 N 0.844
HEC1 Arabidopsis lyrata fgenesh2_kg.8__2711__AT5G67060.1 N 0.844
GLYMA01G39360 Glycine max GLYMA01G39360 N 0.844
GLYMA04G04190 Glycine max GLYMA04G04190 N 0.844
GLYMA05G19920 Glycine max GLYMA05G19920 N 0.844
GLYMA06G04380 Glycine max GLYMA06G04380 N 0.844
GLYMA11G05920 Glycine max GLYMA11G05920 N 0.844
GLYMA17G19830 Glycine max GLYMA17G19830 N 0.844
GRMZM2G134735 Zea mays GRMZM2G134735 N 0.844
GRMZM2G414252 Zea mays GRMZM2G414252 N 0.844
GRMZM2G471635 Zea mays GRMZM2G471635 N 0.844
GSMUA_Achr10G25590_001 Musa acuminata GSMUA_Achr10G25590_001 N 0.844
GSMUA_Achr5G01290_001 Musa acuminata GSMUA_Achr5G01290_001 N 0.844
GSMUA_Achr6G18580_001 Musa acuminata GSMUA_Achr6G18580_001 N 0.844
GSMUA_Achr8G23350_001 Musa acuminata GSMUA_Achr8G23350_001 N 0.844
LPERR08G01030 Leersia perrieri LPERR08G01030 N 0.844
LPERR08G14680 Leersia perrieri LPERR08G14680 N 0.844
LPERR09G09120 Leersia perrieri LPERR09G09120 N 0.844
MLOC_16429 Hordeum vulgare MLOC_16429 N 0.844
MTR_5g017210 Medicago truncatula MTR_5g017210 N 0.844
OB08G10720 Oryza brachyantha OB08G10720 N 0.844
OGLUM08G00660 Oryza glumaepatula OGLUM08G00660 N 0.844
OGLUM08G18600 Oryza glumaepatula OGLUM08G18600 N 0.844
OGLUM09G13100 Oryza glumaepatula OGLUM09G13100 N 0.844
OMERI08G00980 Oryza meridionalis OMERI08G00980 N 0.844
OMERI09G10060 Oryza meridionalis OMERI09G10060 N 0.844
ONIVA03G20840 Oryza nivara ONIVA03G20840 N 0.844
ONIVA08G00590 Oryza nivara ONIVA08G00590 N 0.844
ONIVA08G19790 Oryza nivara ONIVA08G19790 N 0.844
OPUNC08G00600 Oryza punctata OPUNC08G00600 N 0.844
OPUNC08G15570 Oryza punctata OPUNC08G15570 N 0.844
OPUNC09G11020 Oryza punctata OPUNC09G11020 N 0.844
ORGLA08G0155700 Oryza glaberrima ORGLA08G0155700 N 0.844
ORGLA08G0237200 Oryza glaberrima ORGLA08G0237200 N 0.844
ORGLA09G0096500 Oryza glaberrima ORGLA09G0096500 N 0.844
ORUFI08G00650 Oryza rufipogon ORUFI08G00650 N 0.844
ORUFI08G19930 Oryza rufipogon ORUFI08G19930 N 0.844
ORUFI09G13650 Oryza rufipogon ORUFI09G13650 N 0.844
OS08G0108500 Oryza sativa OS08G0108500 N 0.844
OS09G0455300 Oryza sativa OS09G0455300 N 0.844
PGSC0003DMG400004039 Solanum tuberosum PGSC0003DMG400004039 N 0.844
PGSC0003DMG400007964 Solanum tuberosum PGSC0003DMG400007964 N 0.844
POPTR_0002s12660 Populus trichocarpa POPTR_0002s12660 N 0.844
POPTR_0005s18210 Populus trichocarpa POPTR_0005s18210 N 0.844
POPTR_0014s02720 Populus trichocarpa POPTR_0014s02720 N 0.844
PRUPE_ppa021226mg Prunus persica PRUPE_ppa021226mg N 0.844
Sb02g026530 Sorghum bicolor Sb02g026530 N 0.844
Sb07g000900 Sorghum bicolor Sb07g000900 N 0.844
Sb07g000910 Sorghum bicolor Sb07g000910 N 0.844
Sb07g022920 Sorghum bicolor Sb07g022920 N 0.844
Si015197m.g Setaria italica Si015197m.g N 0.844
Si015349m.g Setaria italica Si015349m.g N 0.844
Si030966m.g Setaria italica Si030966m.g N 0.844
Solyc02g090950.1 Solanum lycopersicum Solyc02g090950.1 N 0.844
Solyc04g078790.2 Solanum lycopersicum Solyc04g078790.2 N 0.844
TCM_000632 Theobroma cacao TCM_000632 N 0.844
TCM_033818 Theobroma cacao TCM_033818 N 0.844
Traes_5BL_DDC2491F7 Triticum aestivum Traes_5BL_DDC2491F7 N 0.844
Traes_6AS_C1A37E015 Triticum aestivum Traes_6AS_C1A37E015 N 0.844
Traes_7DL_F43F7A9A3 Triticum aestivum Traes_7DL_F43F7A9A3 N 0.844
TRIUR3_19098 Triticum urartu TRIUR3_19098 N 0.844
VIT_07s0031g00550 Vitis vinifera VIT_07s0031g00550 N 0.844
Ca_01550 Cicer arietinum Ca_01550 N 0.844
Ca_09282 Cicer arietinum Ca_09282 N 0.844
Cla020973 Citrullus lanatus Cla020973 N 0.844
Cla022928 Citrullus lanatus Cla022928 N 0.844
Pm005293 Prunus mume Pm005293 N 0.844
30115.m001220 Ricinus communis 30115.m001220 N 0.844
30170.m013861 Ricinus communis 30170.m013861 N 0.844
cassava41909.m1 Manihot esculenta cassava41909.m1 N 0.844
cassava45275.m1 Manihot esculenta cassava45275.m1 N 0.844
cassava8495.m1 Manihot esculenta cassava8495.m1 N 0.844
Cucsa.352300 Cucumis sativus Cucsa.352300 N 0.844
Cucsa.396050 Cucumis sativus Cucsa.396050 N 0.844
mg018414m Mimulus guttatus mg018414m N 0.844
Aquca_007_00665 Aquilegia coerulea Aquca_007_00665 N 0.844
Bostr.0568s0128 Boechera stricta Bostr.0568s0128 N 0.844
Bostr.13129s0018 Boechera stricta Bostr.13129s0018 N 0.844
Bostr.6864s0212 Boechera stricta Bostr.6864s0212 N 0.844
Cagra.0706s0009 Capsella grandiflora Cagra.0706s0009 N 0.844
Cagra.1085s0086 Capsella grandiflora Cagra.1085s0086 N 0.844
Cagra.2428s0003 Capsella grandiflora Cagra.2428s0003 N 0.844
Carubv10003900m.g Capsella rubella Carubv10003900m.g N 0.844
Carubv10019056m.g Capsella rubella Carubv10019056m.g N 0.844
Carubv10027898m.g Capsella rubella Carubv10027898m.g N 0.844
Ciclev10003815m.g Citrus clementina Ciclev10003815m.g N 0.844
Ciclev10026967m.g Citrus clementina Ciclev10026967m.g N 0.844
Eucgr.F00216 Eucalyptus grandis Eucgr.F00216 N 0.844
Eucgr.H01682 Eucalyptus grandis Eucgr.H01682 N 0.844
Eucgr.H02048 Eucalyptus grandis Eucgr.H02048 N 0.844
evm.TU.supercontig_49.31 Carica papaya evm.TU.supercontig_49.31 N 0.844
evm.TU.supercontig_55.142 Carica papaya evm.TU.supercontig_55.142 N 0.844
gene09115-v1.0-hybrid Fragaria vesca gene09115-v1.0-hybrid N 0.844
gene23830-v1.0-hybrid Fragaria vesca gene23830-v1.0-hybrid N 0.844
Gorai.003G025300 Gossypium raimondii Gorai.003G025300 N 0.844
Gorai.007G213700 Gossypium raimondii Gorai.007G213700 N 0.844
Gorai.009G212900 Gossypium raimondii Gorai.009G212900 N 0.844
Gorai.010G020500 Gossypium raimondii Gorai.010G020500 N 0.844
Lus10012670.g Linum usitatissimum Lus10012670.g N 0.844
MDP0000123893 Malus domestica MDP0000123893 N 0.844
MDP0000123894 Malus domestica MDP0000123894 N 0.844
MDP0000249405 Malus domestica MDP0000249405 N 0.844
orange1.1g024139m.g Citrus sinensis orange1.1g024139m.g N 0.844
orange1.1g043072m.g Citrus sinensis orange1.1g043072m.g N 0.844
Pavir.Ba02034 Panicum virgatum Pavir.Ba02034 N 0.844
Pavir.Fa00680 Panicum virgatum Pavir.Fa00680 N 0.844
Pavir.Fa02152 Panicum virgatum Pavir.Fa02152 N 0.844
Pavir.J20328 Panicum virgatum Pavir.J20328 N 0.844
Pavir.J21912 Panicum virgatum Pavir.J21912 N 0.844
Pavir.J39499 Panicum virgatum Pavir.J39499 N 0.844
SapurV1A.0167s0080 Salix purpurea SapurV1A.0167s0080 N 0.844
SapurV1A.0423s0010 Salix purpurea SapurV1A.0423s0010 N 0.844
SapurV1A.2123s0040 Salix purpurea SapurV1A.2123s0040 N 0.844
Thhalv10004846m.g Eutrema salsugineum Thhalv10004846m.g N 0.844
Thhalv10011068m.g Eutrema salsugineum Thhalv10011068m.g N 0.844
Thhalv10015330m.g Eutrema salsugineum Thhalv10015330m.g N 0.844
PK01043.1 Cannabis sativa PK01043.1 N 0.844
BGIOSGA001389 Oryza indica BGIOSGA001389 N 0.843
BRADI2G41390 Brachypodium distachyon BRADI2G41390 N 0.843
GRMZM2G164341 Zea mays GRMZM2G164341 N 0.843
LPERR01G17090 Leersia perrieri LPERR01G17090 N 0.843
OBART01G19850 Oryza barthii OBART01G19850 N 0.843
OGLUM01G23470 Oryza glumaepatula OGLUM01G23470 N 0.843
OMERI01G18460 Oryza meridionalis OMERI01G18460 N 0.843
ONIVA01G07440 Oryza nivara ONIVA01G07440 N 0.843
OPUNC01G20250 Oryza punctata OPUNC01G20250 N 0.843
ORGLA01G0163600 Oryza glaberrima ORGLA01G0163600 N 0.843
OS01G0566800 Oryza sativa OS01G0566800 N 0.843
Sb03g025570 Sorghum bicolor Sb03g025570 N 0.843
Si003753m.g Setaria italica Si003753m.g N 0.843
TRAES3BF276900020CFD_g Triticum aestivum TRAES3BF276900020CFD_g N 0.843
TRIUR3_28638 Triticum urartu TRIUR3_28638 N 0.843
Pavir.Ea01618 Panicum virgatum Pavir.Ea01618 N 0.843
Pavir.Eb02113 Panicum virgatum Pavir.Eb02113 N 0.843
GRMZM2G111666 Zea mays GRMZM2G111666 N 0.842
Sb03g032520 Sorghum bicolor Sb03g032520 N 0.842
Si001743m.g Setaria italica Si001743m.g N 0.842
Pavir.Eb02901 Panicum virgatum Pavir.Eb02901 N 0.842
IND Arabidopsis thaliana AT4G00120 N 0.841
Bo3g054830 Brassica oleracea Bo3g054830 N 0.841
Bra000979 Brassica rapa Bra000979 N 0.841
IND1 Arabidopsis lyrata fgenesh2_kg.6__3690__AT4G00120.1 N 0.841
GLYMA04G39210 Glycine max GLYMA04G39210 N 0.841
GLYMA05G32410 Glycine max GLYMA05G32410 N 0.841
GLYMA06G15730 Glycine max GLYMA06G15730 N 0.841
GLYMA08G16570 Glycine max GLYMA08G16570 N 0.841
MTR_3g101810 Medicago truncatula MTR_3g101810 N 0.841
MTR_8g093500 Medicago truncatula MTR_8g093500 N 0.841
PGSC0003DMG400028657 Solanum tuberosum PGSC0003DMG400028657 N 0.841
POPTR_0005s06220 Populus trichocarpa POPTR_0005s06220 N 0.841
XM_002310473.1 Populus trichocarpa POPTR_0007s03950 N 0.841
PRUPE_ppa021410mg Prunus persica PRUPE_ppa021410mg N 0.841
PRUPE_ppa022938mg Prunus persica PRUPE_ppa022938mg N 0.841
Solyc11g005780.1 Solanum lycopersicum Solyc11g005780.1 N 0.841
Solyc12g088790.1 Solanum lycopersicum Solyc12g088790.1 N 0.841
TCM_001435 Theobroma cacao TCM_001435 N 0.841
HEC3 Vitis vinifera VIT_04s0044g01040 N 0.841
VIT_18s0001g10400 Vitis vinifera VIT_18s0001g10400 N 0.841
Ca_02154 Cicer arietinum Ca_02154 N 0.841
Ca_09667 Cicer arietinum Ca_09667 N 0.841
Cla008578 Citrullus lanatus Cla008578 N 0.841
Pm001707 Prunus mume Pm001707 N 0.841
Pm026380 Prunus mume Pm026380 N 0.841
30136.m001043 Ricinus communis 30136.m001043 N 0.841
cassava15224.m1 Manihot esculenta cassava15224.m1 N 0.841
cassava5871.m1 Manihot esculenta cassava5871.m1 N 0.841
Cucsa.101020 Cucumis sativus Cucsa.101020 N 0.841
mgf019142m Mimulus guttatus mgf019142m N 0.841
Aquca_010_00306 Aquilegia coerulea Aquca_010_00306 N 0.841
Aquca_022_00317 Aquilegia coerulea Aquca_022_00317 N 0.841
Bostr.14547s0021 Boechera stricta Bostr.14547s0021 N 0.841
Cagra.1261s0004 Capsella grandiflora Cagra.1261s0004 N 0.841
Carubv10003163m.g Capsella rubella Carubv10003163m.g N 0.841
Eucgr.H04946 Eucalyptus grandis Eucgr.H04946 N 0.841
gene17881-v1.0-hybrid Fragaria vesca gene17881-v1.0-hybrid N 0.841
Gorai.011G116100 Gossypium raimondii Gorai.011G116100 N 0.841
Lus10005710.g Linum usitatissimum Lus10005710.g N 0.841
Lus10042647.g Linum usitatissimum Lus10042647.g N 0.841
MDP0000420192 Malus domestica MDP0000420192 N 0.841
MDP0000711774 Malus domestica MDP0000711774 N 0.841
SapurV1A.0352s0020 Salix purpurea SapurV1A.0352s0020 N 0.841
SapurV1A.0550s0030 Salix purpurea SapurV1A.0550s0030 N 0.841
Thhalv10029526m.g Eutrema salsugineum Thhalv10029526m.g N 0.841
LjSGA_011209.1 Lotus japonicus LjSGA_011209.1 N 0.841
LjT10C23.20.nc Lotus japonicus LjT10C23.20.nc N 0.841
GSMUA_Achr8G24970_001 Musa acuminata GSMUA_Achr8G24970_001 N 0.840