CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cucsa.125970
(
Cucumis sativus
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Cucsa.125970
T048166_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cucsa.125970.1
bHLH
245
285
KVRKEKLGDKITALQQLVSPFGKTDTASVLHEAIEYIKFLH
Links
Other
bHLH
family TFs
Other
Cucumis sativus
TFs
232 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
27733.m000033
Ricinus communis
27733.m000033
N
0.910
28405.m000015
Ricinus communis
28405.m000015
N
0.879
29842.m003704
Ricinus communis
29842.m003704
N
0.911
30170.m014085
Ricinus communis
30170.m014085
N
0.887
Al_scaffold_0006_3588
Arabidopsis lyrata
Al_scaffold_0006_3588
N
0.876
Aquca_010_00556
Aquilegia coerulea
Aquca_010_00556
N
0.887
Aquca_028_00271
Aquilegia coerulea
Aquca_028_00271
N
0.911
AT4G05170
Arabidopsis thaliana
AT4G05170
N
0.876
BGIOSGA000686
Oryza indica
BGIOSGA000686
N
0.911
BGIOSGA017200
Oryza indica
BGIOSGA017200
N
0.911
BGIOSGA020126
Oryza indica
BGIOSGA020126
N
0.911
BGIOSGA020128
Oryza indica
BGIOSGA020128
N
0.911
BHLH103
Arabidopsis thaliana
AT4G21340
N
0.866
BHLH110
Arabidopsis thaliana
AT1G27660
N
0.887
BHLH112
Arabidopsis thaliana
AT1G61660
N
0.876
BHLH123
Arabidopsis thaliana
AT3G20640
N
0.910
Bo01052s010
Brassica oleracea
Bo01052s010
N
0.910
Bo1g024090
Brassica oleracea
Bo1g024090
N
0.866
Bo1g098400
Brassica oleracea
Bo1g098400
N
0.876
Bo1g108770
Brassica oleracea
Bo1g108770
N
0.857
Bo1g108780
Brassica oleracea
Bo1g108780
N
0.857
Bo3g076150
Brassica oleracea
Bo3g076150
N
0.910
Bo9g041010
Brassica oleracea
Bo9g041010
N
0.876
Bo9g076250
Brassica oleracea
Bo9g076250
N
0.864
Bostr.10040s0018
Boechera stricta
Bostr.10040s0018
N
0.876
Bostr.10689s0083
Boechera stricta
Bostr.10689s0083
N
0.866
Bostr.19424s0583
Boechera stricta
Bostr.19424s0583
N
0.910
Bostr.26675s0184
Boechera stricta
Bostr.26675s0184
N
0.854
Bostr.2983s0058
Boechera stricta
Bostr.2983s0058
N
0.876
Bra001798
Brassica rapa
Bra001798
N
0.910
Bra013520
Brassica rapa
Bra013520
N
0.866
Bra023939
Brassica rapa
Bra023939
N
0.857
Bra027080
Brassica rapa
Bra027080
N
0.876
Bra029562
Brassica rapa
Bra029562
N
0.864
Bra031413
Brassica rapa
Bra031413
N
0.876
Bra035761
Brassica rapa
Bra035761
N
0.898
Cagra.0316s0001
Capsella grandiflora
Cagra.0316s0001
N
0.910
Cagra.1062s0002
Capsella grandiflora
Cagra.1062s0002
N
0.854
Cagra.1981s0012
Capsella grandiflora
Cagra.1981s0012
N
0.876
Cagra.2507s0001
Capsella grandiflora
Cagra.2507s0001
N
0.876
Carubv10003683m.g
Capsella rubella
Carubv10003683m.g
N
0.876
Carubv10006994m.g
Capsella rubella
Carubv10006994m.g
N
0.854
Carubv10013632m.g
Capsella rubella
Carubv10013632m.g
N
0.910
Carubv10020420m.g
Capsella rubella
Carubv10020420m.g
N
0.876
cassava13240.valid.m1
Manihot esculenta
cassava13240.valid.m1
N
0.911
cassava19346.valid.m1
Manihot esculenta
cassava19346.valid.m1
N
0.911
cassava21180.m1
Manihot esculenta
cassava21180.m1
N
0.891
cassava28105.m1
Manihot esculenta
cassava28105.m1
N
0.910
cassava33658.m1
Manihot esculenta
cassava33658.m1
N
0.856
cassava36740.valid.m1
Manihot esculenta
cassava36740.valid.m1
N
0.879
cassava36956.valid.m1
Manihot esculenta
cassava36956.valid.m1
N
0.910
cassava37772.valid.m1
Manihot esculenta
cassava37772.valid.m1
N
0.879
cassava37773.valid.m1
Manihot esculenta
cassava37773.valid.m1
N
0.879
cassava42530.valid.m1
Manihot esculenta
cassava42530.valid.m1
N
0.887
Ca_00214
Cicer arietinum
Ca_00214
N
0.911
Ca_04928
Cicer arietinum
Ca_04928
N
0.887
Ca_06936
Cicer arietinum
Ca_06936
N
0.910
Ca_19891
Cicer arietinum
Ca_19891
N
0.910
chr5.CM0200.1030.nc
Lotus japonicus
chr5.CM0200.1030.nc
N
0.855
Ciclev10001291m.g
Citrus clementina
Ciclev10001291m.g
N
0.887
Ciclev10008228m.g
Citrus clementina
Ciclev10008228m.g
N
0.910
Ciclev10015039m.g
Citrus clementina
Ciclev10015039m.g
N
0.911
Cla003883
Citrullus lanatus
Cla003883
N
0.910
Cla011068
Citrullus lanatus
Cla011068
N
0.855
Cla021101
Citrullus lanatus
Cla021101
N
0.887
Cucsa.059580
Cucumis sativus
Cucsa.059580
N
0.910
Cucsa.095280
Cucumis sativus
Cucsa.095280
N
0.855
Cucsa.342640
Cucumis sativus
Cucsa.342640
N
0.887
Cucsa.359290
Cucumis sativus
Cucsa.359290
N
0.887
Eucgr.D00881
Eucalyptus grandis
Eucgr.D00881
N
0.864
Eucgr.E03614
Eucalyptus grandis
Eucgr.E03614
N
0.911
Eucgr.F03384
Eucalyptus grandis
Eucgr.F03384
N
0.910
evm.TU.supercontig_12.1
Carica papaya
evm.TU.supercontig_12.1
N
0.910
evm.TU.supercontig_27.162
Carica papaya
evm.TU.supercontig_27.162
N
0.911
evm.TU.supercontig_99.32
Carica papaya
evm.TU.supercontig_99.32
N
0.887
F775_12027
Aegilops tauschii
F775_12027
N
0.911
F775_20405
Aegilops tauschii
F775_20405
N
0.911
fgenesh2_kg.1__2924__AT1G27660.1
Arabidopsis lyrata
fgenesh2_kg.1__2924__AT1G27660.1
N
0.887
fgenesh2_kg.2__291__AT1G61660.1
Arabidopsis lyrata
fgenesh2_kg.2__291__AT1G61660.1
N
0.876
gene03259-v1.0-hybrid
Fragaria vesca
gene03259-v1.0-hybrid
N
0.910
gene11847-v1.0-hybrid
Fragaria vesca
gene11847-v1.0-hybrid
N
0.887
gene30665-v1.0-hybrid
Fragaria vesca
gene30665-v1.0-hybrid
N
0.911
GLYMA06G40760
Glycine max
GLYMA06G40760
N
0.910
GLYMA12G17630
Glycine max
GLYMA12G17630
N
0.910
GLYMA12G34490
Glycine max
GLYMA12G34490
N
0.910
GLYMA13G32320
Glycine max
GLYMA13G32320
N
0.911
GLYMA13G36010
Glycine max
GLYMA13G36010
N
0.910
GLYMA15G07010
Glycine max
GLYMA15G07010
N
0.911
GLYMA16G24661
Glycine max
GLYMA16G24661
N
0.899
Gorai.002G079200
Gossypium raimondii
Gorai.002G079200
N
0.910
Gorai.006G085000
Gossypium raimondii
Gorai.006G085000
N
0.911
Gorai.009G175300
Gossypium raimondii
Gorai.009G175300
N
0.911
Gorai.009G199600
Gossypium raimondii
Gorai.009G199600
N
0.887
Gorai.009G429100
Gossypium raimondii
Gorai.009G429100
N
0.910
Gorai.010G147100
Gossypium raimondii
Gorai.010G147100
N
0.911
Gorai.011G020100
Gossypium raimondii
Gorai.011G020100
N
0.911
GRMZM2G004732
Zea mays
GRMZM2G004732
N
0.911
GRMZM2G155217
Zea mays
GRMZM2G155217
N
0.911
GRMZM2G313058
Zea mays
GRMZM2G313058
N
0.911
GRMZM2G440529
Zea mays
GRMZM2G440529
N
0.911
GSMUA_Achr10G04860_001
Musa acuminata
GSMUA_Achr10G04860_001
N
0.911
GSMUA_Achr11G18680_001
Musa acuminata
GSMUA_Achr11G18680_001
N
0.911
GSMUA_Achr4G33630_001
Musa acuminata
GSMUA_Achr4G33630_001
N
0.911
GSMUA_Achr5G26430_001
Musa acuminata
GSMUA_Achr5G26430_001
N
0.911
GSMUA_Achr6G24280_001
Musa acuminata
GSMUA_Achr6G24280_001
N
0.887
GSMUA_Achr9G12100_001
Musa acuminata
GSMUA_Achr9G12100_001
N
0.911
GSMUA_Achr9G24670_001
Musa acuminata
GSMUA_Achr9G24670_001
N
0.911
LjSGA_014369.1
Lotus japonicus
LjSGA_014369.1
N
0.911
LjSGA_021413.2
Lotus japonicus
LjSGA_021413.2
N
0.885
LPERR01G28830
Leersia perrieri
LPERR01G28830
N
0.911
Lus10007613.g
Linum usitatissimum
Lus10007613.g
N
0.911
Lus10018400.g
Linum usitatissimum
Lus10018400.g
N
0.911
Lus10025987.g
Linum usitatissimum
Lus10025987.g
N
0.911
Lus10038550.g
Linum usitatissimum
Lus10038550.g
N
0.910
MDP0000168695
Malus domestica
MDP0000168695
N
0.887
MDP0000262020
Malus domestica
MDP0000262020
N
0.887
MDP0000295440
Malus domestica
MDP0000295440
N
0.910
MDP0000296508
Malus domestica
MDP0000296508
N
0.910
MDP0000301999
Malus domestica
MDP0000301999
N
0.911
MDP0000687814
Malus domestica
MDP0000687814
N
0.887
mgf001258m
Mimulus guttatus
mgf001258m
N
0.910
mgf008488m
Mimulus guttatus
mgf008488m
N
0.911
mgf013138m
Mimulus guttatus
mgf013138m
N
0.887
mgf016565m
Mimulus guttatus
mgf016565m
N
0.911
MLOC_37666
Hordeum vulgare
MLOC_37666
N
0.911
MLOC_57076
Hordeum vulgare
MLOC_57076
N
0.887
MLOC_72940
Hordeum vulgare
MLOC_72940
N
0.911
MTR_2g011070
Medicago truncatula
MTR_2g011070
N
0.911
MTR_2g081820
Medicago truncatula
MTR_2g081820
N
0.910
MTR_3g112170
Medicago truncatula
MTR_3g112170
N
0.887
MTR_8g466800
Medicago truncatula
MTR_8g466800
N
0.910
OB04G33270
Oryza brachyantha
OB04G33270
N
0.911
OB05G29420
Oryza brachyantha
OB05G29420
N
0.911
OB08G14900
Oryza brachyantha
OB08G14900
N
0.911
OBART01G33360
Oryza barthii
OBART01G33360
N
0.911
OBART04G24870
Oryza barthii
OBART04G24870
N
0.911
OBART05G21860
Oryza barthii
OBART05G21860
N
0.911
OGLUM01G37590
Oryza glumaepatula
OGLUM01G37590
N
0.911
OGLUM04G26290
Oryza glumaepatula
OGLUM04G26290
N
0.911
OGLUM05G23050
Oryza glumaepatula
OGLUM05G23050
N
0.911
OLONG_006510
Oryza longistaminata
OLONG_006510
N
0.911
OLONG_021979
Oryza longistaminata
OLONG_021979
N
0.887
OLONG_026655
Oryza longistaminata
OLONG_026655
N
0.911
OMERI01G30260
Oryza meridionalis
OMERI01G30260
N
0.911
OMERI04G21930
Oryza meridionalis
OMERI04G21930
N
0.911
OMERI12G12400
Oryza meridionalis
OMERI12G12400
N
0.911
ONIVA01G38120
Oryza nivara
ONIVA01G38120
N
0.911
ONIVA03G13290
Oryza nivara
ONIVA03G13290
N
0.911
ONIVA05G22530
Oryza nivara
ONIVA05G22530
N
0.911
OPUNC01G00360
Oryza punctata
OPUNC01G00360
N
0.887
OPUNC01G32440
Oryza punctata
OPUNC01G32440
N
0.911
OPUNC04G23980
Oryza punctata
OPUNC04G23980
N
0.911
orange1.1g011373m.g
Citrus sinensis
orange1.1g011373m.g
N
0.911
orange1.1g035657m.g
Citrus sinensis
orange1.1g035657m.g
N
0.887
ORGLA04G0213700
Oryza glaberrima
ORGLA04G0213700
N
0.911
ORGLA05G0190400
Oryza glaberrima
ORGLA05G0190400
N
0.911
ORUFI01G36520
Oryza rufipogon
ORUFI01G36520
N
0.911
ORUFI05G23130
Oryza rufipogon
ORUFI05G23130
N
0.911
ORUFI06G19010
Oryza rufipogon
ORUFI06G19010
N
0.911
OS04G0631600
Oryza sativa
OS04G0631600
N
0.911
Pavir.Ea03112
Panicum virgatum
Pavir.Ea03112
N
0.911
Pavir.Eb03429
Panicum virgatum
Pavir.Eb03429
N
0.911
Pavir.Ga00384
Panicum virgatum
Pavir.Ga00384
N
0.911
Pavir.J10443
Panicum virgatum
Pavir.J10443
N
0.911
Pavir.J13928
Panicum virgatum
Pavir.J13928
N
0.911
Pavir.J25904
Panicum virgatum
Pavir.J25904
N
0.911
PDK_20s1457351g001
Phoenix dactylifera
PDK_20s1457351g001
N
0.911
PDK_20s1709901g001
Phoenix dactylifera
PDK_20s1709901g001
N
0.887
PGSC0003DMG400003746
Solanum tuberosum
PGSC0003DMG400003746
N
0.887
PGSC0003DMG400005064
Solanum tuberosum
PGSC0003DMG400005064
N
0.910
PGSC0003DMG400013875
Solanum tuberosum
PGSC0003DMG400013875
N
0.911
PGSC0003DMG400019236
Solanum tuberosum
PGSC0003DMG400019236
N
0.910
PGSC0003DMG400025020
Solanum tuberosum
PGSC0003DMG400025020
N
0.910
PK14284.1
Cannabis sativa
PK14284.1
N
0.911
PK22680.1
Cannabis sativa
PK22680.1
N
0.910
Pm005865
Prunus mume
Pm005865
N
0.887
Pm007388
Prunus mume
Pm007388
N
0.879
Pm009855
Prunus mume
Pm009855
N
0.911
Pm011692
Prunus mume
Pm011692
N
0.910
POPTR_0002s03380
Populus trichocarpa
POPTR_0002s03380
N
0.887
POPTR_0004s02870
Populus trichocarpa
POPTR_0004s02870
N
0.911
POPTR_0005s12150
Populus trichocarpa
POPTR_0005s12150
N
0.911
POPTR_0005s25240
Populus trichocarpa
POPTR_0005s25240
N
0.887
POPTR_0007s13360
Populus trichocarpa
POPTR_0007s13360
N
0.911
POPTR_0011s03560
Populus trichocarpa
POPTR_0011s03560
N
0.911
POPTR_0011s13320
Populus trichocarpa
POPTR_0011s13320
N
0.910
POPTR_0013s13050
Populus trichocarpa
POPTR_0013s13050
N
0.879
POPTR_0019s12530
Populus trichocarpa
POPTR_0019s12530
N
0.879
PRUPE_ppa005486mg
Prunus persica
PRUPE_ppa005486mg
N
0.887
PRUPE_ppa005924mg
Prunus persica
PRUPE_ppa005924mg
N
0.911
PRUPE_ppa012528mg
Prunus persica
PRUPE_ppa012528mg
N
0.879
PRUPE_ppa023041mg
Prunus persica
PRUPE_ppa023041mg
N
0.910
SapurV1A.0006s0290
Salix purpurea
SapurV1A.0006s0290
N
0.887
SapurV1A.0028s0510
Salix purpurea
SapurV1A.0028s0510
N
0.911
SapurV1A.0188s0290
Salix purpurea
SapurV1A.0188s0290
N
0.887
SapurV1A.0388s0180
Salix purpurea
SapurV1A.0388s0180
N
0.879
SapurV1A.0441s0120
Salix purpurea
SapurV1A.0441s0120
N
0.911
SapurV1A.0658s0070
Salix purpurea
SapurV1A.0658s0070
N
0.886
SapurV1A.0694s0030
Salix purpurea
SapurV1A.0694s0030
N
0.910
SapurV1A.1304s0050
Salix purpurea
SapurV1A.1304s0050
N
0.911
SapurV1A.2213s0020
Salix purpurea
SapurV1A.2213s0020
N
0.886
Sb03g008830
Sorghum bicolor
Sb03g008830
N
0.887
Sb03g036670
Sorghum bicolor
Sb03g036670
N
0.911
Sb07g004980
Sorghum bicolor
Sb07g004980
N
0.911
Sb09g024720
Sorghum bicolor
Sb09g024720
N
0.911
Si001796m.g
Setaria italica
Si001796m.g
N
0.911
Si010139m.g
Setaria italica
Si010139m.g
N
0.911
Si013853m.g
Setaria italica
Si013853m.g
N
0.911
Si022548m.g
Setaria italica
Si022548m.g
N
0.911
Solyc02g079760.2
Solanum lycopersicum
Solyc02g079760.2
N
0.911
Solyc02g084880.2
Solanum lycopersicum
Solyc02g084880.2
N
0.887
Solyc03g031450.2
Solanum lycopersicum
Solyc03g031450.2
N
0.911
Solyc04g080710.2
Solanum lycopersicum
Solyc04g080710.2
N
0.887
Solyc07g063830.2
Solanum lycopersicum
Solyc07g063830.2
N
0.910
Solyc10g006640.2
Solanum lycopersicum
Solyc10g006640.2
N
0.910
TCM_019871
Theobroma cacao
TCM_019871
N
0.879
TCM_030051
Theobroma cacao
TCM_030051
N
0.911
TCM_031172
Theobroma cacao
TCM_031172
N
0.910
TCM_034098
Theobroma cacao
TCM_034098
N
0.887
Thhalv10020666m.g
Eutrema salsugineum
Thhalv10020666m.g
N
0.910
Thhalv10023487m.g
Eutrema salsugineum
Thhalv10023487m.g
N
0.876
Thhalv10029319m.g
Eutrema salsugineum
Thhalv10029319m.g
N
0.876
Traes_2AL_70AE1B8B8
Triticum aestivum
Traes_2AL_70AE1B8B8
N
0.911
Traes_2BL_A014BCC51
Triticum aestivum
Traes_2BL_A014BCC51
N
0.911
Traes_2BL_E82F7902D
Triticum aestivum
Traes_2BL_E82F7902D
N
0.911
Traes_2DL_DCD7B13A8
Triticum aestivum
Traes_2DL_DCD7B13A8
N
0.911
TRIUR3_00968
Triticum urartu
TRIUR3_00968
N
0.911
VIT_00s0274g00070
Vitis vinifera
VIT_00s0274g00070
N
0.911
VIT_04s0023g02410
Vitis vinifera
VIT_04s0023g02410
N
0.911
VIT_05s0094g00480
Vitis vinifera
VIT_05s0094g00480
N
0.854
VIT_18s0001g12970
Vitis vinifera
VIT_18s0001g12970
N
0.887
VIT_19s0014g04670
Vitis vinifera
VIT_19s0014g04670
N
0.910