e_gw1.272.41.1 (Physcomitrella patens)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 e_gw1.272.41.1 T048264_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT2G42280
M06733_2.00 		Arabidopsis thaliana
DNCMACTTGYH
DRCAAGTKGNH		 Dap-seq
OMalley et al.(2016)
bHLH130_col_a 		0.880 0.824
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
e_gw1.272.41.1 bHLH 10 60

Links

Other bHLH family TFs
Other Physcomitrella patens TFs

55 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AT2G42280 Arabidopsis thaliana AT2G42280 D 0.880
POPTR_0003s22290 Populus trichocarpa POPTR_0003s22290 I 0.880
scaffold_403077.1 Arabidopsis lyrata scaffold_403077.1 I 0.880
VIT_06s0004g01740 Vitis vinifera VIT_06s0004g01740 I 0.880
30169.m006403 Ricinus communis 30169.m006403 I 0.880
Bostr.25993s0551 Boechera stricta Bostr.25993s0551 I 0.880
Cagra.2636s0012 Capsella grandiflora Cagra.2636s0012 I 0.880
Carubv10023498m.g Capsella rubella Carubv10023498m.g I 0.880
MDP0000307685 Malus domestica MDP0000307685 I 0.880
SapurV1A.0009s0400 Salix purpurea SapurV1A.0009s0400 I 0.880
LPERR08G16800 Leersia perrieri LPERR08G16800 I 0.868
LPERR09G10800 Leersia perrieri LPERR09G10800 I 0.868
e_gw1.83.237.1 Physcomitrella patens e_gw1.83.237.1 I 0.866
gw1.185.89.1 Physcomitrella patens gw1.185.89.1 I 0.856
BGIOSGA016651 Oryza indica BGIOSGA016651 I 0.853
BRADI3G48070 Brachypodium distachyon BRADI3G48070 I 0.853
LPERR04G13560 Leersia perrieri LPERR04G13560 I 0.853
MLOC_12058 Hordeum vulgare MLOC_12058 I 0.853
OB04G24170 Oryza brachyantha OB04G24170 I 0.853
OBART04G16900 Oryza barthii OBART04G16900 I 0.853
OGLUM04G16920 Oryza glumaepatula OGLUM04G16920 I 0.853
OMERI04G14260 Oryza meridionalis OMERI04G14260 I 0.853
ONIVA04G15000 Oryza nivara ONIVA04G15000 I 0.853
OPUNC04G14700 Oryza punctata OPUNC04G14700 I 0.853
ORGLA04G0140000 Oryza glaberrima ORGLA04G0140000 I 0.853
ORUFI04G18350 Oryza rufipogon ORUFI04G18350 I 0.853
OS04G0489600 Oryza sativa OS04G0489600 I 0.853
BGIOSGA004992 Oryza indica BGIOSGA004992 I 0.848
BRADI2G57800 Brachypodium distachyon BRADI2G57800 I 0.848
F775_24576 Aegilops tauschii F775_24576 I 0.848
LPERR01G35240 Leersia perrieri LPERR01G35240 I 0.848
MLOC_20318 Hordeum vulgare MLOC_20318 I 0.848
OB01G49420 Oryza brachyantha OB01G49420 I 0.848
OBART01G40680 Oryza barthii OBART01G40680 I 0.848
OGLUM01G44860 Oryza glumaepatula OGLUM01G44860 I 0.848
OLONG_004619 Oryza longistaminata OLONG_004619 I 0.848
OMERI01G37660 Oryza meridionalis OMERI01G37660 I 0.848
ONIVA01G45730 Oryza nivara ONIVA01G45730 I 0.848
OPUNC01G39450 Oryza punctata OPUNC01G39450 I 0.848
ORGLA01G0346300 Oryza glaberrima ORGLA01G0346300 I 0.848
ORUFI01G44010 Oryza rufipogon ORUFI01G44010 I 0.848
OS01G0900800 Oryza sativa OS01G0900800 I 0.848
Traes_3AL_B68C491B0 Triticum aestivum Traes_3AL_B68C491B0 I 0.848
TRAES3BF135900010CFD_g Triticum aestivum TRAES3BF135900010CFD_g I 0.848
TRIUR3_33816 Triticum urartu TRIUR3_33816 I 0.848
Ca_07284 Cicer arietinum Ca_07284 I 0.847
Bo4g015860 Brassica oleracea Bo4g015860 I 0.845
Bra004678 Brassica rapa Bra004678 I 0.845
MTR_1g052470 Medicago truncatula MTR_1g052470 I 0.845
MTR_4g065870 Medicago truncatula MTR_4g065870 I 0.845
Ca_18899 Cicer arietinum Ca_18899 I 0.845
Cla006394 Citrullus lanatus Cla006394 I 0.845
Cucsa.143260 Cucumis sativus Cucsa.143260 I 0.845
mgf016092m Mimulus guttatus mgf016092m I 0.845
MTR_7g092540 Medicago truncatula MTR_7g092540 I 0.841