e_gw1.83.237.1 (Physcomitrella patens)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 e_gw1.83.237.1 T048277_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT2G42280
M06733_2.00 		Arabidopsis thaliana
DNCMACTTGYH
DRCAAGTKGNH		 Dap-seq
OMalley et al.(2016)
bHLH130_col_a 		0.858 0.824
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
e_gw1.83.237.1 bHLH 39 89

Links

Other bHLH family TFs
Other Physcomitrella patens TFs

35 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo4g015860 Brassica oleracea Bo4g015860 I 0.893
Bra004678 Brassica rapa Bra004678 I 0.893
MTR_1g052470 Medicago truncatula MTR_1g052470 I 0.893
MTR_4g065870 Medicago truncatula MTR_4g065870 I 0.893
Ca_18899 Cicer arietinum Ca_18899 I 0.893
Cla006394 Citrullus lanatus Cla006394 I 0.893
Cucsa.143260 Cucumis sativus Cucsa.143260 I 0.893
mgf016092m Mimulus guttatus mgf016092m I 0.893
estExt_fgenesh1_pg.C_2130035 Physcomitrella patens estExt_fgenesh1_pg.C_2130035 N 0.884
BRADI4G33670 Brachypodium distachyon BRADI4G33670 I 0.881
GRMZM2G142932 Zea mays GRMZM2G142932 I 0.881
GRMZM2G153454 Zea mays GRMZM2G153454 I 0.881
MLOC_30102 Hordeum vulgare MLOC_30102 I 0.881
Sb07g027810 Sorghum bicolor Sb07g027810 I 0.881
Si013950m.g Setaria italica Si013950m.g I 0.881
Si030166m.g Setaria italica Si030166m.g I 0.881
Traes_5BL_4317E525B Triticum aestivum Traes_5BL_4317E525B I 0.881
Pavir.Ba00676 Panicum virgatum Pavir.Ba00676 I 0.881
Pavir.Bb03157 Panicum virgatum Pavir.Bb03157 I 0.881
Pavir.Fa00493 Panicum virgatum Pavir.Fa00493 I 0.881
Pavir.J25484 Panicum virgatum Pavir.J25484 I 0.881
e_gw1.272.41.1 Physcomitrella patens e_gw1.272.41.1 I 0.866
AT2G42280 Arabidopsis thaliana AT2G42280 D 0.858
POPTR_0003s22290 Populus trichocarpa POPTR_0003s22290 I 0.858
scaffold_403077.1 Arabidopsis lyrata scaffold_403077.1 I 0.858
VIT_06s0004g01740 Vitis vinifera VIT_06s0004g01740 I 0.858
30169.m006403 Ricinus communis 30169.m006403 I 0.858
Bostr.25993s0551 Boechera stricta Bostr.25993s0551 I 0.858
Cagra.2636s0012 Capsella grandiflora Cagra.2636s0012 I 0.858
Carubv10023498m.g Capsella rubella Carubv10023498m.g I 0.858
MDP0000307685 Malus domestica MDP0000307685 I 0.858
SapurV1A.0009s0400 Salix purpurea SapurV1A.0009s0400 I 0.858
GRMZM5G879527 Zea mays GRMZM5G879527 N 0.851
LPERR08G16800 Leersia perrieri LPERR08G16800 I 0.846
LPERR09G10800 Leersia perrieri LPERR09G10800 I 0.846