e_gw.492.5.1 (Branchiostoma floridae)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 e_gw.492.5.1 T048292_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Mitf
M01741_2.00 		Mus musculus
NCDCGTGAYN
NRTCACGHGN		 PBM
Weirauch et al.(2014)
pTH5465 		0.845 0.906
MITF
M08058_2.00 		Homo sapiens
NNNDRTCACGTGAYHNNN
NNNDRTCACGTGAYHNNN		 ChIP-seq
Mathelier et al.(2014)
MA0620.2 		0.845 0.906
MITF
M08740_2.00 		Homo sapiens
YCAYGTGACH
DGTCACRTGR		 Misc
Kulakovskiy et al.(2013)
MITF_HUMAN.H11MO.0.A 		0.845 0.906
Mitf
M08765_2.00 		Mus musculus
BCHYGTGACY
RGTCACRDGV		 Misc
Kulakovskiy et al.(2013)
MITF_MOUSE.H11MO.0.A 		0.845 0.906
Mitf
M09475_2.00 		Mus musculus
GTCACRWGVB
VBCWYGTGAC		 Misc
Heinz et al.(2010)
MastCells-MITF_GSE48085 		0.845 0.906
MITF
M09880_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MITF_Q4 		0.845 0.906
MITF
M09881_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MITF_Q6 		0.845 0.906
Tfe3
M01715_2.00 		Mus musculus
NCDCRTGAYN
NRTCAYGHGN		 PBM
Weirauch et al.(2014)
pTH5057 		0.845 0.887
TFE3
M02773_2.00 		Homo sapiens
VNCACGTGMY
RKCACGTGNB		 SELEX
Jolma et al.(2013)
TFE3_1 		0.845 0.887
TFE3
M04058_2.00 		Homo sapiens
YVCACGTGAYN
NRTCACGTGBR		 SELEX
Yin et al.(2017)
TFE3_eDBD_HT-SELEX 		0.845 0.887
Tfe3
M05833_2.00 		Mus musculus
CACGTGAY
RTCACGTG		 SMiLE-seq
Isakova et al.(2017)
TFE3 		0.845 0.887
TFE3
M08709_2.00 		Homo sapiens
TCACGTGACH
DGTCACGTGA		 Misc
Kulakovskiy et al.(2013)
TFE3_HUMAN.H11MO.0.B 		0.845 0.887
Tfe3
M08743_2.00 		Mus musculus
TCACGTGACH
DGTCACGTGA		 Misc
Kulakovskiy et al.(2013)
TFE3_MOUSE.H11MO.0.A 		0.845 0.887
Tfe3
M09884_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TFEA_01 		0.845 0.887
TFE3
M09790_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TFEA_Q6 		0.845 0.887
TFE3
M04059_2.00 		Homo sapiens
NRTCACATGBB
VVCATGTGAYN		 SELEX
Yin et al.(2017)
TFE3_eDBD_Methyl-HT-SELEX 		0.845 0.887
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
e_gw.492.5.1 bHLH 235 288

Links

Other bHLH family TFs
Other Branchiostoma floridae TFs

137 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
NV13937 Nasonia vitripennis NV13937 N 0.880
NEMVEDRAFT_v1g240998 Nematostella vectensis NEMVEDRAFT_v1g240998 N 0.876
CGI_10006667 Crassostrea gigas CGI_10006667 N 0.858
LotgiG89098 Lottia gigantea LotgiG89098 N 0.858
MITF Anolis carolinensis ENSACAG00000013586 I 0.845
TFE3 Anolis carolinensis ENSACAG00000022140 I 0.845
ENSAMEG00000012353 Ailuropoda melanoleuca ENSAMEG00000012353 I 0.845
ENSAMEG00000017117 Ailuropoda melanoleuca ENSAMEG00000017117 I 0.845
ENSAMXG00000020781 Astyanax mexicanus ENSAMXG00000020781 I 0.845
ENSAPLG00000011965 Anas platyrhynchos ENSAPLG00000011965 I 0.845
MITF Bos taurus ENSBTAG00000006679 I 0.845
TFE3 Bos taurus ENSBTAG00000008523 I 0.845
MITF Canis familiaris ENSCAFG00000006496 I 0.845
TFE3 Canis familiaris ENSCAFG00000015765 I 0.845
MITF Callithrix jacchus ENSCJAG00000013260 I 0.845
TFE3 Cavia porcellus ENSCPOG00000012410 I 0.845
MITF Cavia porcellus ENSCPOG00000014963 I 0.845
ENSCSAG00000011595 Chlorocebus sabaeus ENSCSAG00000011595 I 0.845
ENSCSAG00000013021 Chlorocebus sabaeus ENSCSAG00000013021 I 0.845
mitfa Danio rerio ENSDARG00000003732 I 0.845
tfe3b Danio rerio ENSDARG00000019457 I 0.845
mitfb Danio rerio ENSDARG00000037833 I 0.845
tfe3a Danio rerio ENSDARG00000098903 I 0.845
MITF Dasypus novemcinctus ENSDNOG00000037006 I 0.845
TFE3 Dasypus novemcinctus ENSDNOG00000039173 I 0.845
Mitf Dipodomys ordii ENSDORG00000003336 I 0.845
ENSDORG00000013258 Dipodomys ordii ENSDORG00000013258 I 0.845
MITF Equus caballus ENSECAG00000005360 I 0.845
TFE3 Equus caballus ENSECAG00000020642 I 0.845
MITF Erinaceus europaeus ENSEEUG00000005163 I 0.845
ENSFALG00000013383 Ficedula albicollis ENSFALG00000013383 I 0.845
TFE3 Felis catus ENSFCAG00000002574 I 0.845
MITF Felis catus ENSFCAG00000024419 I 0.845
TFE3 Homo sapiens ENSG00000068323 D 0.845
MITF Homo sapiens ENSG00000187098 D 0.845
mitfb Gasterosteus aculeatus ENSGACG00000003425 I 0.845
tfe3b Gasterosteus aculeatus ENSGACG00000010355 I 0.845
mitfa Gasterosteus aculeatus ENSGACG00000011875 I 0.845
ENSGALG00000007679 Gallus gallus ENSGALG00000007679 I 0.845
TFE3 Gorilla gorilla ENSGGOG00000014023 I 0.845
MITF Gorilla gorilla ENSGGOG00000024338 I 0.845
ENSGMOG00000007421 Gadus morhua ENSGMOG00000007421 I 0.845
ENSGMOG00000010175 Gadus morhua ENSGMOG00000010175 I 0.845
ENSGMOG00000018115 Gadus morhua ENSGMOG00000018115 I 0.845
ENSLACG00000011547 Latimeria chalumnae ENSLACG00000011547 I 0.845
MITF Loxodonta africana ENSLAFG00000023153 I 0.845
TFE3 Loxodonta africana ENSLAFG00000025585 I 0.845
ENSLOCG00000010058 Lepisosteus oculatus ENSLOCG00000010058 I 0.845
ENSLOCG00000014691 Lepisosteus oculatus ENSLOCG00000014691 I 0.845
MITF Meleagris gallopavo ENSMGAG00000009507 I 0.845
ENSMICG00000002894 Microcebus murinus ENSMICG00000002894 I 0.845
TFE3 Microcebus murinus ENSMICG00000009708 I 0.845
MITF Myotis lucifugus ENSMLUG00000002587 I 0.845
TFE3 Myotis lucifugus ENSMLUG00000030217 I 0.845
MITF Macaca mulatta ENSMMUG00000002100 I 0.845
TFE3 Macaca mulatta ENSMMUG00000023494 I 0.845
MITF Monodelphis domestica ENSMODG00000003754 I 0.845
ENSMPUG00000013794 Mustela putorius furo ENSMPUG00000013794 I 0.845
ENSMPUG00000016972 Mustela putorius furo ENSMPUG00000016972 I 0.845
Tfe3 Mus musculus ENSMUSG00000000134 D 0.845
Mitf Mus musculus ENSMUSG00000035158 D 0.845
ENSNLEG00000002357 Nomascus leucogenys ENSNLEG00000002357 I 0.845
ENSNLEG00000007963 Nomascus leucogenys ENSNLEG00000007963 I 0.845
ENSOANG00000012406 Ornithorhynchus anatinus ENSOANG00000012406 I 0.845
TFE3 Ornithorhynchus anatinus ENSOANG00000013574 I 0.845
ENSOARG00000009833 Ovis aries ENSOARG00000009833 I 0.845
ENSOARG00000011157 Ovis aries ENSOARG00000011157 I 0.845
MITF Oryctolagus cuniculus ENSOCUG00000002190 I 0.845
TFE3 Oryctolagus cuniculus ENSOCUG00000015807 I 0.845
MITF Otolemur garnettii ENSOGAG00000000043 I 0.845
TFE3 Otolemur garnettii ENSOGAG00000031330 I 0.845
ENSONIG00000000820 Oreochromis niloticus ENSONIG00000000820 I 0.845
ENSONIG00000016952 Oreochromis niloticus ENSONIG00000016952 I 0.845
ENSONIG00000020270 Oreochromis niloticus ENSONIG00000020270 I 0.845
ENSONIG00000020291 Oreochromis niloticus ENSONIG00000020291 I 0.845
TFE3 Ochotona princeps ENSOPRG00000007735 I 0.845
mitfa Oryzias latipes ENSORLG00000003123 I 0.845
mitfb Oryzias latipes ENSORLG00000013461 I 0.845
tfe3b Oryzias latipes ENSORLG00000014134 I 0.845
ENSPANG00000011565 Papio anubis ENSPANG00000011565 I 0.845
ENSPANG00000013676 Papio anubis ENSPANG00000013676 I 0.845
TFE3 Procavia capensis ENSPCAG00000003945 I 0.845
ENSPFOG00000001499 Poecilia formosa ENSPFOG00000001499 I 0.845
ENSPFOG00000006677 Poecilia formosa ENSPFOG00000006677 I 0.845
ENSPFOG00000007171 Poecilia formosa ENSPFOG00000007171 I 0.845
ENSPMAG00000004927 Petromyzon marinus ENSPMAG00000004927 I 0.845
ENSPMAG00000008619 Petromyzon marinus ENSPMAG00000008619 I 0.845
ENSPPYG00000013725 Pongo abelii ENSPPYG00000013725 I 0.845
ENSPPYG00000029376 Pongo abelii ENSPPYG00000029376 I 0.845
ENSPSIG00000012120 Pelodiscus sinensis ENSPSIG00000012120 I 0.845
MITF Pan troglodytes ENSPTRG00000015100 I 0.845
TFE3 Pteropus vampyrus ENSPVAG00000009435 I 0.845
Mitf Rattus norvegicus ENSRNOG00000008658 I 0.845
Tfe3 Rattus norvegicus ENSRNOG00000009605 I 0.845
TFE3 Sorex araneus ENSSARG00000000644 I 0.845
MITF Sorex araneus ENSSARG00000002538 I 0.845
ENSSHAG00000017522 Sarcophilus harrisii ENSSHAG00000017522 I 0.845
TFE3 Sus scrofa ENSSSCG00000012287 I 0.845
ENSSTOG00000014237 Ictidomys tridecemlineatus ENSSTOG00000014237 I 0.845
MITF Tupaia belangeri ENSTBEG00000017713 I 0.845
MITF Taeniopygia guttata ENSTGUG00000009847 I 0.845
tfe3b Tetraodon nigroviridis ENSTNIG00000007324 I 0.845
mitfa Tetraodon nigroviridis ENSTNIG00000007360 I 0.845
mitfb Tetraodon nigroviridis ENSTNIG00000012564 I 0.845
ENSTNIG00000019469 Tetraodon nigroviridis ENSTNIG00000019469 I 0.845
mitfa Takifugu rubripes ENSTRUG00000001600 I 0.845
tfe3a Takifugu rubripes ENSTRUG00000005584 I 0.845
mitfb Takifugu rubripes ENSTRUG00000012080 I 0.845
tfe3b Takifugu rubripes ENSTRUG00000013198 I 0.845
ENSTSYG00000011324 Tarsius syrichta ENSTSYG00000011324 I 0.845
MITF Tursiops truncatus ENSTTRG00000007072 I 0.845
TFE3 Tursiops truncatus ENSTTRG00000009064 I 0.845
ENSXMAG00000002200 Xiphophorus maculatus ENSXMAG00000002200 I 0.845
ENSXMAG00000003547 Xiphophorus maculatus ENSXMAG00000003547 I 0.845
ENSXMAG00000007656 Xiphophorus maculatus ENSXMAG00000007656 I 0.845
ENSXMAG00000016472 Xiphophorus maculatus ENSXMAG00000016472 I 0.845
Aan_R007225 Calypte anna Aan_R007225 I 0.845
Afo_R011673 Aptenodytes forsteri Afo_R011673 I 0.845
Alligator_sinensis_CCG002397.1 Alligator sinensis Alligator_sinensis_CCG002397.1 I 0.845
Alligator_sinensis_CCG004214.1 Alligator sinensis Alligator_sinensis_CCG004214.1 I 0.845
Brh_R009446 Buceros rhinoceros Brh_R009446 I 0.845
ENSBTAP00000053693-D1 Bos grunniens ENSBTAP00000053693-D1 I 0.845
ENSMMUP00000030934 Macaca fascicularis ENSMMUP00000030934 I 0.845
ENSP00000338360-D1 Bos grunniens ENSP00000338360-D1 I 0.845
ENSP00000391803 Macaca fascicularis ENSP00000391803 I 0.845
Gfo_R014572 Geospiza fortis Gfo_R014572 I 0.845
Myotis_brandtii_Mitf_10022588 Myotis brandtii Myotis_brandtii_Mitf_10022588 I 0.845
Myotis_brandtii_TFE3_10010865 Myotis brandtii Myotis_brandtii_TFE3_10010865 I 0.845
Pvit_00330 Pogona vitticeps Pvit_00330 I 0.845
Pvit_01233 Pogona vitticeps Pvit_01233 I 0.845
Tal_R001329 Tyto alba Tal_R001329 I 0.845
mitf Xenopus tropicalis XB-GENE-484962 I 0.845
tfe3.S Xenopus laevis XB-GENE-5918226 I 0.845
mitf.L Xenopus laevis XB-GENE-6252679 I 0.845
mitf.S Xenopus laevis XB-GENE-6464338 I 0.845
TFEC Myotis lucifugus ENSMLUG00000008952 I 0.843
Myotis_brandtii_TFEC_10018991 Myotis brandtii Myotis_brandtii_TFEC_10018991 I 0.843