estExt_fgenesh1_pg.C_1630065 (Physcomitrella patens)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 estExt_fgenesh1_pg.C_1630065 T048325_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_pg.C_1630065 bHLH 515 560

Links

Other bHLH family TFs
Other Physcomitrella patens TFs

289 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
estExt_fgenesh1_pg.C_480124 Physcomitrella patens estExt_fgenesh1_pg.C_480124 N 0.914
estExt_fgenesh1_pg.C_980121 Physcomitrella patens estExt_fgenesh1_pg.C_980121 N 0.914
estExt_fgenesh1_pg.C_550008 Physcomitrella patens estExt_fgenesh1_pg.C_550008 N 0.878
fgenesh1_pg.scaffold_273000011 Physcomitrella patens fgenesh1_pg.scaffold_273000011 N 0.878
gw1.67.189.1 Physcomitrella patens gw1.67.189.1 N 0.878
GRMZM2G164341 Zea mays GRMZM2G164341 N 0.871
GSMUA_Achr8G23350_001 Musa acuminata GSMUA_Achr8G23350_001 N 0.871
GRMZM2G354618 Zea mays GRMZM2G354618 N 0.870
GRMZM5G812883 Zea mays GRMZM5G812883 N 0.870
GRMZM5G817854 Zea mays GRMZM5G817854 N 0.870
GRMZM5G818776 Zea mays GRMZM5G818776 N 0.870
AMTR_s00036p00178030 Amborella trichopoda AMTR_s00036p00178030 N 0.867
GRMZM2G081816 Zea mays GRMZM2G081816 N 0.867
POPTR_0001s19250 Populus trichocarpa POPTR_0001s19250 N 0.867
SapurV1A.2172s0010 Salix purpurea SapurV1A.2172s0010 N 0.867
chr3.CM1570.150.nc Lotus japonicus chr3.CM1570.150.nc N 0.867
BGIOSGA000939 Oryza indica BGIOSGA000939 N 0.866
BRADI2G47810 Brachypodium distachyon BRADI2G47810 N 0.866
LPERR01G24260 Leersia perrieri LPERR01G24260 N 0.866
OB01G37310 Oryza brachyantha OB01G37310 N 0.866
OBART01G28250 Oryza barthii OBART01G28250 N 0.866
OGLUM01G32180 Oryza glumaepatula OGLUM01G32180 N 0.866
OLONG_008667 Oryza longistaminata OLONG_008667 N 0.866
OMERI05G07470 Oryza meridionalis OMERI05G07470 N 0.866
ONIVA01G32170 Oryza nivara ONIVA01G32170 N 0.866
OPUNC01G28050 Oryza punctata OPUNC01G28050 N 0.866
ORGLA01G0233600 Oryza glaberrima ORGLA01G0233600 N 0.866
ORUFI01G31350 Oryza rufipogon ORUFI01G31350 N 0.866
OS01G0707500 Oryza sativa OS01G0707500 N 0.866
TRAES3BF075800010CFD_g Triticum aestivum TRAES3BF075800010CFD_g N 0.866
TRIUR3_19402 Triticum urartu TRIUR3_19402 N 0.866
AMTR_s00008p00265010 Amborella trichopoda AMTR_s00008p00265010 N 0.858
HEC2 Arabidopsis thaliana AT3G50330 N 0.858
HEC3 Arabidopsis thaliana AT5G09750 N 0.858
HEC1 Arabidopsis thaliana AT5G67060 N 0.858
BGIOSGA026828 Oryza indica BGIOSGA026828 N 0.858
BGIOSGA027780 Oryza indica BGIOSGA027780 N 0.858
BGIOSGA030896 Oryza indica BGIOSGA030896 N 0.858
Bo1g084640 Brassica oleracea Bo1g084640 N 0.858
Bo2g009510 Brassica oleracea Bo2g009510 N 0.858
Bo2g167880 Brassica oleracea Bo2g167880 N 0.858
Bo7g064100 Brassica oleracea Bo7g064100 N 0.858
Bo8g079710 Brassica oleracea Bo8g079710 N 0.858
Bo9g020420 Brassica oleracea Bo9g020420 N 0.858
Bo9g173860 Brassica oleracea Bo9g173860 N 0.858
Bra012128 Brassica rapa Bra012128 N 0.858
Bra028620 Brassica rapa Bra028620 N 0.858
Bra030002 Brassica rapa Bra030002 N 0.858
Bra036071 Brassica rapa Bra036071 N 0.858
Bra036801 Brassica rapa Bra036801 N 0.858
Bra037128 Brassica rapa Bra037128 N 0.858
BRADI3G13300 Brachypodium distachyon BRADI3G13300 N 0.858
BRADI3G38250 Brachypodium distachyon BRADI3G38250 N 0.858
BRADI4G32060 Brachypodium distachyon BRADI4G32060 N 0.858
F775_04427 Aegilops tauschii F775_04427 N 0.858
F775_52433 Aegilops tauschii F775_52433 N 0.858
HEC2 Arabidopsis lyrata fgenesh2_kg.5__1376__AT3G50330.1 N 0.858
HEC3 Arabidopsis lyrata fgenesh2_kg.6__929__AT5G09750.1 N 0.858
HEC1 Arabidopsis lyrata fgenesh2_kg.8__2711__AT5G67060.1 N 0.858
GLYMA01G39360 Glycine max GLYMA01G39360 N 0.858
GLYMA04G04190 Glycine max GLYMA04G04190 N 0.858
GLYMA05G19920 Glycine max GLYMA05G19920 N 0.858
GLYMA06G04380 Glycine max GLYMA06G04380 N 0.858
GLYMA11G05920 Glycine max GLYMA11G05920 N 0.858
GLYMA17G19830 Glycine max GLYMA17G19830 N 0.858
GRMZM2G134735 Zea mays GRMZM2G134735 N 0.858
GRMZM2G414252 Zea mays GRMZM2G414252 N 0.858
GRMZM2G471635 Zea mays GRMZM2G471635 N 0.858
GSMUA_Achr10G25590_001 Musa acuminata GSMUA_Achr10G25590_001 N 0.858
GSMUA_Achr5G01290_001 Musa acuminata GSMUA_Achr5G01290_001 N 0.858
GSMUA_Achr6G18580_001 Musa acuminata GSMUA_Achr6G18580_001 N 0.858
GSMUA_Achr9G15380_001 Musa acuminata GSMUA_Achr9G15380_001 N 0.858
GSMUA_Achr9G29130_001 Musa acuminata GSMUA_Achr9G29130_001 N 0.858
LPERR08G01030 Leersia perrieri LPERR08G01030 N 0.858
LPERR08G14680 Leersia perrieri LPERR08G14680 N 0.858
LPERR09G09120 Leersia perrieri LPERR09G09120 N 0.858
MLOC_16429 Hordeum vulgare MLOC_16429 N 0.858
MTR_5g017210 Medicago truncatula MTR_5g017210 N 0.858
OB08G10720 Oryza brachyantha OB08G10720 N 0.858
OGLUM08G00660 Oryza glumaepatula OGLUM08G00660 N 0.858
OGLUM08G18600 Oryza glumaepatula OGLUM08G18600 N 0.858
OGLUM09G13100 Oryza glumaepatula OGLUM09G13100 N 0.858
OMERI08G00980 Oryza meridionalis OMERI08G00980 N 0.858
OMERI09G10060 Oryza meridionalis OMERI09G10060 N 0.858
ONIVA03G20840 Oryza nivara ONIVA03G20840 N 0.858
ONIVA08G00590 Oryza nivara ONIVA08G00590 N 0.858
ONIVA08G19790 Oryza nivara ONIVA08G19790 N 0.858
OPUNC08G00600 Oryza punctata OPUNC08G00600 N 0.858
OPUNC08G15570 Oryza punctata OPUNC08G15570 N 0.858
OPUNC09G11020 Oryza punctata OPUNC09G11020 N 0.858
ORGLA08G0155700 Oryza glaberrima ORGLA08G0155700 N 0.858
ORGLA08G0237200 Oryza glaberrima ORGLA08G0237200 N 0.858
ORGLA09G0096500 Oryza glaberrima ORGLA09G0096500 N 0.858
ORUFI08G00650 Oryza rufipogon ORUFI08G00650 N 0.858
ORUFI08G19930 Oryza rufipogon ORUFI08G19930 N 0.858
ORUFI09G13650 Oryza rufipogon ORUFI09G13650 N 0.858
OS08G0108500 Oryza sativa OS08G0108500 N 0.858
OS09G0455300 Oryza sativa OS09G0455300 N 0.858
PGSC0003DMG400007964 Solanum tuberosum PGSC0003DMG400007964 N 0.858
POPTR_0002s12660 Populus trichocarpa POPTR_0002s12660 N 0.858
POPTR_0005s18210 Populus trichocarpa POPTR_0005s18210 N 0.858
POPTR_0007s10950 Populus trichocarpa POPTR_0007s10950 N 0.858
POPTR_0014s02720 Populus trichocarpa POPTR_0014s02720 N 0.858
PRUPE_ppa021226mg Prunus persica PRUPE_ppa021226mg N 0.858
Sb02g026530 Sorghum bicolor Sb02g026530 N 0.858
Sb07g000900 Sorghum bicolor Sb07g000900 N 0.858
Sb07g000910 Sorghum bicolor Sb07g000910 N 0.858
Sb07g022920 Sorghum bicolor Sb07g022920 N 0.858
Si015197m.g Setaria italica Si015197m.g N 0.858
Si015349m.g Setaria italica Si015349m.g N 0.858
Si030966m.g Setaria italica Si030966m.g N 0.858
Solyc04g078790.2 Solanum lycopersicum Solyc04g078790.2 N 0.858
TCM_000632 Theobroma cacao TCM_000632 N 0.858
TCM_033818 Theobroma cacao TCM_033818 N 0.858
Traes_5BL_DDC2491F7 Triticum aestivum Traes_5BL_DDC2491F7 N 0.858
Traes_6AS_C1A37E015 Triticum aestivum Traes_6AS_C1A37E015 N 0.858
Traes_7DL_F43F7A9A3 Triticum aestivum Traes_7DL_F43F7A9A3 N 0.858
TRIUR3_19098 Triticum urartu TRIUR3_19098 N 0.858
VIT_07s0031g00550 Vitis vinifera VIT_07s0031g00550 N 0.858
Ca_01550 Cicer arietinum Ca_01550 N 0.858
Ca_09282 Cicer arietinum Ca_09282 N 0.858
Cla020973 Citrullus lanatus Cla020973 N 0.858
Cla022928 Citrullus lanatus Cla022928 N 0.858
Pm005293 Prunus mume Pm005293 N 0.858
30115.m001220 Ricinus communis 30115.m001220 N 0.858
30170.m013861 Ricinus communis 30170.m013861 N 0.858
cassava41909.m1 Manihot esculenta cassava41909.m1 N 0.858
cassava45275.m1 Manihot esculenta cassava45275.m1 N 0.858
cassava8495.m1 Manihot esculenta cassava8495.m1 N 0.858
Cucsa.352300 Cucumis sativus Cucsa.352300 N 0.858
Cucsa.396050 Cucumis sativus Cucsa.396050 N 0.858
mg018414m Mimulus guttatus mg018414m N 0.858
Aquca_007_00665 Aquilegia coerulea Aquca_007_00665 N 0.858
Bostr.0568s0128 Boechera stricta Bostr.0568s0128 N 0.858
Bostr.13129s0018 Boechera stricta Bostr.13129s0018 N 0.858
Bostr.6864s0212 Boechera stricta Bostr.6864s0212 N 0.858
Cagra.0706s0009 Capsella grandiflora Cagra.0706s0009 N 0.858
Cagra.1085s0086 Capsella grandiflora Cagra.1085s0086 N 0.858
Cagra.2428s0003 Capsella grandiflora Cagra.2428s0003 N 0.858
Carubv10003900m.g Capsella rubella Carubv10003900m.g N 0.858
Carubv10019056m.g Capsella rubella Carubv10019056m.g N 0.858
Carubv10027898m.g Capsella rubella Carubv10027898m.g N 0.858
Ciclev10003815m.g Citrus clementina Ciclev10003815m.g N 0.858
Eucgr.F00216 Eucalyptus grandis Eucgr.F00216 N 0.858
Eucgr.H01682 Eucalyptus grandis Eucgr.H01682 N 0.858
Eucgr.H02048 Eucalyptus grandis Eucgr.H02048 N 0.858
evm.TU.supercontig_49.31 Carica papaya evm.TU.supercontig_49.31 N 0.858
evm.TU.supercontig_55.142 Carica papaya evm.TU.supercontig_55.142 N 0.858
gene09115-v1.0-hybrid Fragaria vesca gene09115-v1.0-hybrid N 0.858
gene23830-v1.0-hybrid Fragaria vesca gene23830-v1.0-hybrid N 0.858
Gorai.003G025300 Gossypium raimondii Gorai.003G025300 N 0.858
Gorai.007G213700 Gossypium raimondii Gorai.007G213700 N 0.858
Gorai.009G212900 Gossypium raimondii Gorai.009G212900 N 0.858
Gorai.010G020500 Gossypium raimondii Gorai.010G020500 N 0.858
Lus10012670.g Linum usitatissimum Lus10012670.g N 0.858
MDP0000123893 Malus domestica MDP0000123893 N 0.858
MDP0000123894 Malus domestica MDP0000123894 N 0.858
MDP0000249405 Malus domestica MDP0000249405 N 0.858
orange1.1g024139m.g Citrus sinensis orange1.1g024139m.g N 0.858
Pavir.Ba02034 Panicum virgatum Pavir.Ba02034 N 0.858
Pavir.Fa00680 Panicum virgatum Pavir.Fa00680 N 0.858
Pavir.Fa02152 Panicum virgatum Pavir.Fa02152 N 0.858
Pavir.J20328 Panicum virgatum Pavir.J20328 N 0.858
Pavir.J21912 Panicum virgatum Pavir.J21912 N 0.858
Pavir.J39499 Panicum virgatum Pavir.J39499 N 0.858
SapurV1A.0167s0080 Salix purpurea SapurV1A.0167s0080 N 0.858
SapurV1A.0423s0010 Salix purpurea SapurV1A.0423s0010 N 0.858
SapurV1A.2123s0040 Salix purpurea SapurV1A.2123s0040 N 0.858
Thhalv10004846m.g Eutrema salsugineum Thhalv10004846m.g N 0.858
Thhalv10011068m.g Eutrema salsugineum Thhalv10011068m.g N 0.858
Thhalv10015330m.g Eutrema salsugineum Thhalv10015330m.g N 0.858
PK01043.1 Cannabis sativa PK01043.1 N 0.858
IND Arabidopsis thaliana AT4G00120 N 0.855
Bo3g054830 Brassica oleracea Bo3g054830 N 0.855
Bra000979 Brassica rapa Bra000979 N 0.855
IND1 Arabidopsis lyrata fgenesh2_kg.6__3690__AT4G00120.1 N 0.855
GLYMA04G39210 Glycine max GLYMA04G39210 N 0.855
GLYMA05G32410 Glycine max GLYMA05G32410 N 0.855
GLYMA06G15730 Glycine max GLYMA06G15730 N 0.855
GLYMA08G16570 Glycine max GLYMA08G16570 N 0.855
MTR_3g101810 Medicago truncatula MTR_3g101810 N 0.855
MTR_8g093500 Medicago truncatula MTR_8g093500 N 0.855
PGSC0003DMG400028657 Solanum tuberosum PGSC0003DMG400028657 N 0.855
POPTR_0005s06220 Populus trichocarpa POPTR_0005s06220 N 0.855
XM_002310473.1 Populus trichocarpa POPTR_0007s03950 N 0.855
PRUPE_ppa021410mg Prunus persica PRUPE_ppa021410mg N 0.855
PRUPE_ppa022938mg Prunus persica PRUPE_ppa022938mg N 0.855
SELMODRAFT_405220 Selaginella moellendorffii SELMODRAFT_405220 N 0.855
SELMODRAFT_415047 Selaginella moellendorffii SELMODRAFT_415047 N 0.855
Solyc11g005780.1 Solanum lycopersicum Solyc11g005780.1 N 0.855
Solyc12g088790.1 Solanum lycopersicum Solyc12g088790.1 N 0.855
TCM_001435 Theobroma cacao TCM_001435 N 0.855
HEC3 Vitis vinifera VIT_04s0044g01040 N 0.855
VIT_18s0001g10400 Vitis vinifera VIT_18s0001g10400 N 0.855
Ca_02154 Cicer arietinum Ca_02154 N 0.855
Ca_09667 Cicer arietinum Ca_09667 N 0.855
Cla008578 Citrullus lanatus Cla008578 N 0.855
Pm001707 Prunus mume Pm001707 N 0.855
Pm026380 Prunus mume Pm026380 N 0.855
30136.m001043 Ricinus communis 30136.m001043 N 0.855
cassava15224.m1 Manihot esculenta cassava15224.m1 N 0.855
cassava5871.m1 Manihot esculenta cassava5871.m1 N 0.855
Cucsa.101020 Cucumis sativus Cucsa.101020 N 0.855
mgf019142m Mimulus guttatus mgf019142m N 0.855
Aquca_010_00306 Aquilegia coerulea Aquca_010_00306 N 0.855
Aquca_022_00317 Aquilegia coerulea Aquca_022_00317 N 0.855
Bostr.14547s0021 Boechera stricta Bostr.14547s0021 N 0.855
Cagra.1261s0004 Capsella grandiflora Cagra.1261s0004 N 0.855
Carubv10003163m.g Capsella rubella Carubv10003163m.g N 0.855
Eucgr.H04946 Eucalyptus grandis Eucgr.H04946 N 0.855
gene17881-v1.0-hybrid Fragaria vesca gene17881-v1.0-hybrid N 0.855
Gorai.011G116100 Gossypium raimondii Gorai.011G116100 N 0.855
Lus10005710.g Linum usitatissimum Lus10005710.g N 0.855
Lus10042647.g Linum usitatissimum Lus10042647.g N 0.855
MDP0000420192 Malus domestica MDP0000420192 N 0.855
MDP0000711774 Malus domestica MDP0000711774 N 0.855
SapurV1A.0352s0020 Salix purpurea SapurV1A.0352s0020 N 0.855
SapurV1A.0550s0030 Salix purpurea SapurV1A.0550s0030 N 0.855
Thhalv10029526m.g Eutrema salsugineum Thhalv10029526m.g N 0.855
LjSGA_011209.1 Lotus japonicus LjSGA_011209.1 N 0.855
LjT10C23.20.nc Lotus japonicus LjT10C23.20.nc N 0.855
Ciclev10013640m.g Citrus clementina Ciclev10013640m.g N 0.854
orange1.1g039972m.g Citrus sinensis orange1.1g039972m.g N 0.854
BGIOSGA001389 Oryza indica BGIOSGA001389 N 0.847
BRADI2G41390 Brachypodium distachyon BRADI2G41390 N 0.847
GLYMA13G42900 Glycine max GLYMA13G42900 N 0.847
GLYMA15G02531 Glycine max GLYMA15G02531 N 0.847
LPERR01G17090 Leersia perrieri LPERR01G17090 N 0.847
MTR_2g100490 Medicago truncatula MTR_2g100490 N 0.847
MTR_8g015450 Medicago truncatula MTR_8g015450 N 0.847
OBART01G19850 Oryza barthii OBART01G19850 N 0.847
OGLUM01G23470 Oryza glumaepatula OGLUM01G23470 N 0.847
OMERI01G18460 Oryza meridionalis OMERI01G18460 N 0.847
ONIVA01G07440 Oryza nivara ONIVA01G07440 N 0.847
OPUNC01G20250 Oryza punctata OPUNC01G20250 N 0.847
ORGLA01G0163600 Oryza glaberrima ORGLA01G0163600 N 0.847
OS01G0566800 Oryza sativa OS01G0566800 N 0.847
PGSC0003DMG400004039 Solanum tuberosum PGSC0003DMG400004039 N 0.847
PRUPE_ppa015446mg Prunus persica PRUPE_ppa015446mg N 0.847
Sb03g025570 Sorghum bicolor Sb03g025570 N 0.847
Si003753m.g Setaria italica Si003753m.g N 0.847
Solyc02g090950.1 Solanum lycopersicum Solyc02g090950.1 N 0.847
Solyc03g121240.1 Solanum lycopersicum Solyc03g121240.1 N 0.847
TCM_028961 Theobroma cacao TCM_028961 N 0.847
TRAES3BF276900020CFD_g Triticum aestivum TRAES3BF276900020CFD_g N 0.847
TRIUR3_28638 Triticum urartu TRIUR3_28638 N 0.847
VIT_09s0002g02700 Vitis vinifera VIT_09s0002g02700 N 0.847
Ca_02767 Cicer arietinum Ca_02767 N 0.847
Cla015855 Citrullus lanatus Cla015855 N 0.847
Pm030884 Prunus mume Pm030884 N 0.847
30146.m003443 Ricinus communis 30146.m003443 N 0.847
cassava34914.m1 Manihot esculenta cassava34914.m1 N 0.847
Cucsa.360770 Cucumis sativus Cucsa.360770 N 0.847
mgf023933m Mimulus guttatus mgf023933m N 0.847
Aquca_001_00189 Aquilegia coerulea Aquca_001_00189 N 0.847
Ciclev10026976m.g Citrus clementina Ciclev10026976m.g N 0.847
evm.TU.supercontig_131.7 Carica papaya evm.TU.supercontig_131.7 N 0.847
gene22897-v1.0-hybrid Fragaria vesca gene22897-v1.0-hybrid N 0.847
Gorai.003G060900 Gossypium raimondii Gorai.003G060900 N 0.847
Gorai.011G069200 Gossypium raimondii Gorai.011G069200 N 0.847
Lus10003500.g Linum usitatissimum Lus10003500.g N 0.847
Lus10009745.g Linum usitatissimum Lus10009745.g N 0.847
MDP0000145937 Malus domestica MDP0000145937 N 0.847
MDP0000166245 Malus domestica MDP0000166245 N 0.847
orange1.1g020172m.g Citrus sinensis orange1.1g020172m.g N 0.847
Pavir.Ea01618 Panicum virgatum Pavir.Ea01618 N 0.847
Pavir.Eb02113 Panicum virgatum Pavir.Eb02113 N 0.847
PK21140.1 Cannabis sativa PK21140.1 N 0.847
GRMZM2G111666 Zea mays GRMZM2G111666 N 0.846
Sb03g032520 Sorghum bicolor Sb03g032520 N 0.846
Si001743m.g Setaria italica Si001743m.g N 0.846
Pavir.Eb02901 Panicum virgatum Pavir.Eb02901 N 0.846
BHLH87 Arabidopsis thaliana AT3G21330 N 0.844
Bo5g101160 Brassica oleracea Bo5g101160 N 0.844
Bra031275 Brassica rapa Bra031275 N 0.844
fgenesh2_kg.3__2354__AT3G21330.1 Arabidopsis lyrata fgenesh2_kg.3__2354__AT3G21330.1 N 0.844
GLYMA07G01611 Glycine max GLYMA07G01611 N 0.844
GLYMA08G21130 Glycine max GLYMA08G21130 N 0.844
GSMUA_Achr8G24970_001 Musa acuminata GSMUA_Achr8G24970_001 N 0.844
Ca_10121 Cicer arietinum Ca_10121 N 0.844
Cla020499 Citrullus lanatus Cla020499 N 0.844
Cucsa.366890 Cucumis sativus Cucsa.366890 N 0.844
Bostr.19424s0519 Boechera stricta Bostr.19424s0519 N 0.844
Cagra.1757s0024 Capsella grandiflora Cagra.1757s0024 N 0.844
Carubv10013989m.g Capsella rubella Carubv10013989m.g N 0.844
Thhalv10022273m.g Eutrema salsugineum Thhalv10022273m.g N 0.844
Bo3g078540 Brassica oleracea Bo3g078540 N 0.843
Bra001826 Brassica rapa Bra001826 N 0.843
SapurV1A.0623s0130 Salix purpurea SapurV1A.0623s0130 N 0.842