CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ocbimv22015061m.g
(
Octopus bimaculoides
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Ocbimv22015061m.g
T048851_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Arnt
M01719_2.00
Mus musculus
NNKCACGTGMNN
NNKCACGTGMNN
PBM
Weirauch et al.(2014)
pTH5111
0.889
0.889
ARNT
M08732_2.00
Homo sapiens
NKRCGTGMN
NKCACGYMN
Misc
Kulakovskiy et al.(2013)
ARNT_HUMAN.H11MO.0.B
0.889
0.889
ARNT
M09459_2.00
Homo sapiens
KCACGTNN
NNACGTGM
Misc
Heinz et al.(2010)
T47D-HIF1b_GSE59937
0.889
0.889
ARNT
M09863_2.00
Homo sapiens
NVNNNCACGTGNHHHN
NDDDNCACGTGNNNBN
Transfac
Matys et al.(2006)
V$ARNT_01
0.889
0.889
ARNT
M09864_2.00
Homo sapiens
VVNNNRKCACGTGMYNNNBB
VVNNNRKCACGTGMYNNNBB
Transfac
Matys et al.(2006)
V$ARNT_02
0.889
0.889
ARNT
M09865_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ARNT_Q6_01
0.889
0.889
ARNT
M09866_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ARNT_Q6
0.889
0.889
tgo
M06005_2.00
Drosophila melanogaster
RDDTCGTGAYY
RRTCACGAHHY
B1H
Zhu et al.(2011)
dys_tgo_SANGER_5_FBgn0015014
0.889
0.870
tgo
M06006_2.00
Drosophila melanogaster
SDTTGCGTGAC
GTCACGCAAHS
B1H
Zhu et al.(2011)
ss_tgo_SANGER_10_FBgn0015014
0.889
0.870
tgo
M06007_2.00
Drosophila melanogaster
KCACGTGAC
GTCACGTGM
B1H
Zhu et al.(2011)
tgo_cyc_SANGER_5_FBgn0015014
0.889
0.870
tgo
M06008_2.00
Drosophila melanogaster
RTACGTGAC
GTCACGTAY
B1H
Zhu et al.(2011)
tgo_sima_SANGER_5_FBgn0015014
0.889
0.870
tgo
M06009_2.00
Drosophila melanogaster
VWACGTGACY
RGTCACGTWB
B1H
Zhu et al.(2011)
tgo_sim_SANGER_5_FBgn0015014
0.889
0.870
tgo
M06010_2.00
Drosophila melanogaster
TGCGTGAC
GTCACGCA
B1H
Zhu et al.(2011)
tgo_ss_SANGER_5_FBgn0015014
0.889
0.870
tgo
M06011_2.00
Drosophila melanogaster
RCACGTGAC
GTCACGTGY
B1H
Zhu et al.(2011)
tgo_tai_SANGER_5_FBgn0015014
0.889
0.870
tgo
M06012_2.00
Drosophila melanogaster
VTACGTGACB
VGTCACGTAB
B1H
Zhu et al.(2011)
tgo_trh_SANGER_5_FBgn0015014
0.889
0.870
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ocbimv22015060m.p
bHLH
60
113
ARESHCEIERRRRNKMTAYINELCDMVPTCSTLARKPDKLTILRMAVSHMKTLR
Ocbimv22015061m.p
bHLH
60
113
ARESHCEIERRRRNKMTAYINELCDMVPTCSTLARKPDKLTILRMAVSHMKTLR
Links
Other
bHLH
family TFs
Other
Octopus bimaculoides
TFs
131 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000001200
Ailuropoda melanoleuca
ENSAMEG00000001200
I
0.889
Alligator_sinensis_CCG020663.1
Alligator sinensis
Alligator_sinensis_CCG020663.1
I
0.889
ENSAPLG00000013397
Anas platyrhynchos
ENSAPLG00000013397
I
0.889
ARNT
Anolis carolinensis
ENSACAG00000011254
I
0.889
AATE014785
Anopheles atroparvus
AATE014785
I
0.889
ADIR005096
Anopheles dirus
ADIR005096
I
0.889
AEPI009051
Anopheles epiroticus
AEPI009051
I
0.889
AFAF016726
Anopheles farauti
AFAF016726
I
0.889
AFUN000829
Anopheles funestus
AFUN000829
I
0.889
AMEC017008
Anopheles melas
AMEC017008
I
0.889
AQUA011339
Anopheles quadriannulatus
AQUA011339
I
0.889
Afo_R007655
Aptenodytes forsteri
Afo_R007655
I
0.889
ENSAMXG00000012473
Astyanax mexicanus
ENSAMXG00000012473
I
0.865
BGLB009342
Biomphalaria glabrata
BGLB009342
I
0.914
BGIBMGA003472
Bombyx mori
BGIBMGA003472
I
0.889
ENSBTAP00000028023-D1
Bos grunniens
ENSBTAP00000028023-D1
I
0.889
ARNT
Bos taurus
ENSBTAG00000021037
I
0.889
estExt_fgenesh2_pg.C_1460068
Branchiostoma floridae
estExt_fgenesh2_pg.C_1460068
I
0.889
ARNT
Callithrix jacchus
ENSCJAG00000006839
I
0.889
ARNT
Canis familiaris
ENSCAFG00000012149
I
0.889
CapteG88605
Capitella teleta
CapteG88605
I
0.894
CapteG88932
Capitella teleta
CapteG88932
I
0.894
ARNT
Cavia porcellus
ENSCPOG00000014578
I
0.889
Cmyd_10007604
Chelonia mydas
Cmyd_10007604
I
0.889
ENSCSAG00000018038
Chlorocebus sabaeus
ENSCSAG00000018038
I
0.889
ARNT
Choloepus hoffmanni
ENSCHOG00000010045
I
0.889
CLEC002917
Cimex lectularius
CLEC002917
I
0.889
CLEC012864
Cimex lectularius
CLEC012864
I
0.889
arnt
Ciona intestinalis
ENSCING00000008102
I
0.889
ENSCSAVG00000010893
Ciona savignyi
ENSCSAVG00000010893
I
0.858
CGI_10017200
Crassostrea gigas
CGI_10017200
I
0.894
KGM_04621
Danaus plexippus
KGM_04621
I
0.889
arnt
Danio rerio
ENSDARG00000021855
I
0.858
DAPPUDRAFT_309730
Daphnia pulex
DAPPUDRAFT_309730
I
0.889
ARNT
Dasypus novemcinctus
ENSDNOG00000005093
I
0.889
ENSDORG00000014121
Dipodomys ordii
ENSDORG00000014121
I
0.889
GF18433
Drosophila ananassae
FBgn0095451
I
0.889
GG17399
Drosophila erecta
FBgn0109625
I
0.889
GH18221
Drosophila grimshawi
FBgn0125689
I
0.889
tgo
Drosophila melanogaster
FBgn0264075
D
0.889
GI10175
Drosophila mojavensis
FBgn0132941
I
0.889
GL12493
Drosophila persimilis
FBgn0150099
I
0.889
GA11313
Drosophila pseudoobscura
FBgn0071367
I
0.889
GM26289
Drosophila sechellia
FBgn0181143
I
0.889
GD20825
Drosophila simulans
FBgn0192287
I
0.889
GJ10876
Drosophila virilis
FBgn0198144
I
0.889
GK11420
Drosophila willistoni
FBgn0213431
I
0.889
GE24803
Drosophila yakuba
FBgn0241904
I
0.889
ECANG7_07095
Echinococcus canadensis
ECANG7_07095
I
0.848
ARNT
Echinops telfairi
ENSETEG00000001280
I
0.889
ECPE_0000540401
Echinostoma caproni
ECPE_0000540401
I
0.865
ARNT
Equus caballus
ENSECAG00000009602
I
0.889
ARNT
Erinaceus europaeus
ENSEEUG00000007500
I
0.889
D915_11353
Fasciola hepatica
D915_11353
I
0.857
ARNT
Felis catus
ENSFCAG00000003644
I
0.889
ENSGMOG00000006058
Gadus morhua
ENSGMOG00000006058
I
0.889
ARNT
Gallus gallus
ENSGALG00000000751
I
0.889
arnt
Gasterosteus aculeatus
ENSGACG00000011686
I
0.889
Gfo_R011690
Geospiza fortis
Gfo_R011690
I
0.889
ARNT
Gorilla gorilla
ENSGGOG00000015383
I
0.889
HHAL008564-PA
Halyomorpha halys
HHAL008564-PA
I
0.889
HHAL009348-PA
Halyomorpha halys
HHAL009348-PA
I
0.889
HMEL013329
Heliconius melpomene
HMEL013329
I
0.889
ARNT
Homo sapiens
ENSG00000143437
D
0.889
ENSSTOG00000013876
Ictidomys tridecemlineatus
ENSSTOG00000013876
I
0.889
ISCW023999
Ixodes scapularis
ISCW023999
I
0.889
ENSLACG00000013911
Latimeria chalumnae
ENSLACG00000013911
I
0.858
LDEC004670
Leptinotarsa decemlineata
LDEC004670
I
0.889
ARNT
Loxodonta africana
ENSLAFG00000011282
I
0.889
LCUP007387
Lucilia cuprina
LCUP007387
I
0.889
LLOJ003291
Lutzomyia longipalpis
LLOJ003291
I
0.889
ENSP00000351407
Macaca fascicularis
ENSP00000351407
I
0.889
ARNT
Macaca mulatta
ENSMMUG00000000541
I
0.889
ENSMEUG00000003050
Macropus eugenii
ENSMEUG00000003050
I
0.889
ARNT
Meleagris gallopavo
ENSMGAG00000000943
I
0.889
MCINX011636
Melitaea cinxia
MCINX011636
I
0.889
MCOS_0000389001
Mesocestoides corti
MCOS_0000389001
I
0.846
ARNT
Microcebus murinus
ENSMICG00000005872
I
0.889
ARNT
Monodelphis domestica
ENSMODG00000018814
I
0.889
MDOA015409
Musca domestica
MDOA015409
I
0.889
ENSMPUG00000004365
Mustela putorius furo
ENSMPUG00000004365
I
0.889
Arnt
Mus musculus
ENSMUSG00000015522
D
0.889
Myotis_brandtii_ARNT_10031836
Myotis brandtii
Myotis_brandtii_ARNT_10031836
I
0.889
ARNT
Myotis lucifugus
ENSMLUG00000003502
I
0.889
NV11924
Nasonia vitripennis
NV11924
I
0.889
ENSNLEG00000009971
Nomascus leucogenys
ENSNLEG00000009971
I
0.889
ARNT
Ochotona princeps
ENSOPRG00000010374
I
0.889
T265_03519
Opisthorchis viverrini
T265_03519
I
0.857
ENSONIG00000006431
Oreochromis niloticus
ENSONIG00000006431
I
0.889
ARNT
Ornithorhynchus anatinus
ENSOANG00000004580
I
0.889
ARNT
Oryctolagus cuniculus
ENSOCUG00000013582
I
0.889
ARNT
Oryzias latipes
ENSORLG00000010551
I
0.889
ARNT
Otolemur garnettii
ENSOGAG00000004523
I
0.889
ENSOARG00000020870
Ovis aries
ENSOARG00000020870
I
0.889
ARNT
Pan troglodytes
ENSPTRG00000001266
I
0.889
ENSPANG00000016773
Papio anubis
ENSPANG00000016773
I
0.889
PHUM505970
Pediculus humanus
PHUM505970
I
0.889
ENSPSIG00000008480
Pelodiscus sinensis
ENSPSIG00000008480
I
0.889
ENSPFOG00000005237
Poecilia formosa
ENSPFOG00000005237
I
0.858
Pvit_04978
Pogona vitticeps
Pvit_04978
I
0.889
ENSPPYG00000000888
Pongo abelii
ENSPPYG00000000888
I
0.889
ARNT
Procavia capensis
ENSPCAG00000008485
I
0.889
PXEA_0001988401
Protopolystoma xenopodis
PXEA_0001988401
I
0.889
ARNT
Pteropus vampyrus
ENSPVAG00000004354
I
0.889
Arnt
Rattus norvegicus
ENSRNOG00000031174
I
0.889
RPRC004351
Rhodnius prolixus
RPRC004351
I
0.889
Sakowv30011795m.g
Saccoglossus kowalevskii
Sakowv30011795m.g
I
0.889
ENSSHAG00000012227
Sarcophilus harrisii
ENSSHAG00000012227
I
0.889
A_03374
Schistosoma haematobium
A_03374
I
0.857
Smp_123420
Schistosoma mansoni
Smp_123420
I
0.857
SMTD_0000012501
Schistosoma mattheei
SMTD_0000012501
I
0.857
SMU15010696
Schmidtea mediterranea
SMU15010696
I
0.889
SINV17691
Solenopsis invicta
SINV17691
I
0.889
ARNT
Sorex araneus
ENSSARG00000005490
I
0.877
SPU_000129
Strongylocentrotus purpuratus
SPU_000129
I
0.858
ARNT
Sus scrofa
ENSSSCG00000006646
I
0.889
ARNT
Taeniopygia guttata
ENSTGUG00000004647
I
0.889
ARNT
Takifugu rubripes
ENSTRUG00000014504
I
0.889
ENSTSYG00000006074
Tarsius syrichta
ENSTSYG00000006074
I
0.889
tetur01g08330
Tetranychus urticae
tetur01g08330
I
0.914
ARNT
Tetraodon nigroviridis
ENSTNIG00000008064
I
0.889
TC004710
Tribolium castaneum
TC004710
I
0.889
TRE_0001250901
Trichobilharzia regenti
TRE_0001250901
I
0.857
ARNT
Tursiops truncatus
ENSTTRG00000007388
I
0.889
Tal_R007034
Tyto alba
Tal_R007034
I
0.889
ARNT
Vicugna pacos
ENSVPAG00000005439
I
0.889
arnt.L
Xenopus laevis
XB-GENE-17346408
I
0.889
arnt.S
Xenopus laevis
XB-GENE-866594
I
0.889
arnt
Xenopus tropicalis
XB-GENE-855450
I
0.889
ENSXMAG00000016545
Xiphophorus maculatus
ENSXMAG00000016545
I
0.858