CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sakowv30007307m.g
(
Saccoglossus kowalevskii
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Sakowv30007307m.g
T048896_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FERD3L
M04140_2.00
Homo sapiens
GYVACAGCTGKYRC
GYRMCAGCTGTBRC
SELEX
Yin et al.(2017)
FERD3L_FL_HT-SELEX_1
0.857
0.808
FERD3L
M04141_2.00
Homo sapiens
GTRMCAKMTGKYRC
GYRMCAKMTGKYAC
SELEX
Yin et al.(2017)
FERD3L_FL_HT-SELEX_2
0.857
0.808
FERD3L
M04142_2.00
Homo sapiens
GTVACAGCTGKYRC
GYRMCAGCTGTBAC
SELEX
Yin et al.(2017)
FERD3L_FL_Methyl-HT-SELEX_1
0.857
0.808
FERD3L
M04143_2.00
Homo sapiens
GTRMCAKMTGKYRC
GYRMCAKMTGKYAC
SELEX
Yin et al.(2017)
FERD3L_FL_Methyl-HT-SELEX_2
0.857
0.808
Fer3
M05993_2.00
Drosophila melanogaster
GKVACAGVTG
CABCTGTBMC
B1H
Zhu et al.(2011)
Fer3_da_SANGER_5_FBgn0037937
0.857
0.769
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
23916738_peptide
bHLH
158
210
QRKAANVRERKRMFNINEAFDELRKTVPTFAYEKRLSRIETLKLAIMYISFLG
Links
Other
bHLH
family TFs
Other
Saccoglossus kowalevskii
TFs
104 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAEL006206
Aedes aegypti
AAEL006206
I
0.857
AALB002484
Anopheles albimanus
AALB002484
I
0.857
Aan_R001045
Calypte anna
Aan_R001045
I
0.857
AARA010038
Anopheles arabiensis
AARA010038
I
0.857
AATE012814
Anopheles atroparvus
AATE012814
I
0.857
ACUA002550
Anopheles culicifacies
ACUA002550
I
0.857
ADAC008115
Anopheles darlingi
ADAC008115
I
0.857
ADIR002542
Anopheles dirus
ADIR002542
I
0.857
AEPI002821
Anopheles epiroticus
AEPI002821
I
0.857
AFAF016092
Anopheles farauti
AFAF016092
I
0.857
Afo_R003467
Aptenodytes forsteri
Afo_R003467
I
0.857
AFUN001530
Anopheles funestus
AFUN001530
I
0.857
AGAP003756
Anopheles gambiae
AGAP003756
I
0.857
Alligator_sinensis_CCG002586.1
Alligator sinensis
Alligator_sinensis_CCG002586.1
I
0.857
AMEC003522
Anopheles melas
AMEC003522
I
0.857
AMEM014204
Anopheles merus
AMEM014204
I
0.857
AMIN002935
Anopheles minimus
AMIN002935
I
0.857
AQUA001453
Anopheles quadriannulatus
AQUA001453
I
0.857
ASIS006982
Anopheles sinensis
ASIS006982
I
0.857
ASTEI00910
Anopheles stephensi
ASTEI00910
I
0.857
BGIBMGA004895
Bombyx mori
BGIBMGA004895
I
0.857
Brh_R002964
Buceros rhinoceros
Brh_R002964
I
0.857
Cflo_09551--XP_001121057.1_APIME
Camponotus floridanus
Cflo_09551--XP_001121057.1_APIME
I
0.881
CLEC009418
Cimex lectularius
CLEC009418
I
0.857
Cmyd_10011491
Chelonia mydas
Cmyd_10011491
I
0.857
CPIJ010303
Culex quinquefasciatus
CPIJ010303
I
0.857
CPIJ012703
Culex quinquefasciatus
CPIJ012703
I
0.857
CpipJ_CPIJ010303
Culex pipiens
CpipJ_CPIJ010303
I
0.857
CpipJ_CPIJ012703
Culex pipiens
CpipJ_CPIJ012703
I
0.857
DAPPUDRAFT_99035
Daphnia pulex
DAPPUDRAFT_99035
I
0.857
ENSAMEG00000019030
Ailuropoda melanoleuca
ENSAMEG00000019030
I
0.857
ENSAPLG00000001417
Anas platyrhynchos
ENSAPLG00000001417
I
0.857
ENSCSAG00000019609
Chlorocebus sabaeus
ENSCSAG00000019609
I
0.857
ENSFALG00000014487
Ficedula albicollis
ENSFALG00000014487
I
0.857
ENSLACG00000013215
Latimeria chalumnae
ENSLACG00000013215
I
0.857
ENSMICG00000010110
Microcebus murinus
ENSMICG00000010110
I
0.857
ENSNLEG00000019265
Nomascus leucogenys
ENSNLEG00000019265
I
0.857
ENSOARG00000008159
Ovis aries
ENSOARG00000008159
I
0.857
ENSP00000275461
Macaca fascicularis
ENSP00000275461
I
0.857
ENSP00000275461-D1
Bos grunniens
ENSP00000275461-D1
I
0.857
ENSPANG00000010936
Papio anubis
ENSPANG00000010936
I
0.857
ENSPPYG00000017753
Pongo abelii
ENSPPYG00000017753
I
0.857
ENSPSIG00000000691
Pelodiscus sinensis
ENSPSIG00000000691
I
0.857
ENSSTOG00000025739
Ictidomys tridecemlineatus
ENSSTOG00000025739
I
0.857
ENSTSYG00000010121
Tarsius syrichta
ENSTSYG00000010121
I
0.857
Fer3
Drosophila melanogaster
FBgn0037937
D
0.857
FERD3L
Bos taurus
ENSBTAG00000039955
I
0.857
FERD3L
Canis familiaris
ENSCAFG00000002506
I
0.857
FERD3L
Dasypus novemcinctus
ENSDNOG00000037813
I
0.857
Ferd3l
Dipodomys ordii
ENSDORG00000012867
I
0.857
FERD3L
Equus caballus
ENSECAG00000002518
I
0.857
FERD3L
Erinaceus europaeus
ENSEEUG00000004309
I
0.857
FERD3L
Felis catus
ENSFCAG00000010289
I
0.857
FERD3L
Homo sapiens
ENSG00000146618
D
0.857
FERD3L
Gallus gallus
ENSGALG00000010862
I
0.857
FERD3L
Gorilla gorilla
ENSGGOG00000021943
I
0.857
FERD3L
Loxodonta africana
ENSLAFG00000012782
I
0.857
FERD3L
Meleagris gallopavo
ENSMGAG00000015843
I
0.857
FERD3L
Myotis lucifugus
ENSMLUG00000006930
I
0.857
FERD3L
Macaca mulatta
ENSMMUG00000011174
I
0.857
Ferd3l
Mus musculus
ENSMUSG00000046518
I
0.857
FERD3L
Ornithorhynchus anatinus
ENSOANG00000009615
I
0.857
FERD3L
Oryctolagus cuniculus
ENSOCUG00000016121
I
0.857
FERD3L
Otolemur garnettii
ENSOGAG00000014773
I
0.857
FERD3L
Ochotona princeps
ENSOPRG00000004265
I
0.857
FERD3L
Procavia capensis
ENSPCAG00000013680
I
0.857
FERD3L
Pan troglodytes
ENSPTRG00000018961
I
0.857
FERD3L
Pteropus vampyrus
ENSPVAG00000001711
I
0.857
Ferd3l
Rattus norvegicus
ENSRNOG00000011091
I
0.857
FERD3L
Sus scrofa
ENSSSCG00000015371
I
0.857
FERD3L
Tupaia belangeri
ENSTBEG00000003400
I
0.857
FERD3L
Taeniopygia guttata
ENSTGUG00000002644
I
0.857
ferd3l
Xenopus tropicalis
XB-GENE-983144
I
0.857
GA19952
Drosophila pseudoobscura
FBgn0079948
I
0.857
GB43632
Apis mellifera
GB43632
I
0.881
GD20641
Drosophila simulans
FBgn0192107
I
0.857
GE10092
Drosophila yakuba
FBgn0227974
I
0.857
GF16621
Drosophila ananassae
FBgn0093642
I
0.857
Gfo_R002784
Geospiza fortis
Gfo_R002784
I
0.857
GG17199
Drosophila erecta
FBgn0109426
I
0.857
GH19315
Drosophila grimshawi
FBgn0126780
I
0.857
GI23534
Drosophila mojavensis
FBgn0146260
I
0.857
GI23536
Drosophila mojavensis
FBgn0146262
I
0.857
GJ10284
Drosophila virilis
FBgn0197570
I
0.857
GK11993
Drosophila willistoni
FBgn0214004
I
0.857
GL12254
Drosophila persimilis
FBgn0149861
I
0.857
GM26078
Drosophila sechellia
FBgn0180933
I
0.857
Hsal_03622--XP_001120620.1_APIME
Harpegnathos saltator
Hsal_03622--XP_001120620.1_APIME
I
0.881
KGM_11961
Danaus plexippus
KGM_11961
I
0.857
L798_14654
Zootermopsis nevadensis
L798_14654
I
0.857
LCUP001463
Lucilia cuprina
LCUP001463
I
0.857
LDEC012244
Leptinotarsa decemlineata
LDEC012244
I
0.857
LLOJ008652
Lutzomyia longipalpis
LLOJ008652
I
0.857
MDOA011992
Musca domestica
MDOA011992
I
0.857
Myotis_brandtii_FERD3L_10031741
Myotis brandtii
Myotis_brandtii_FERD3L_10031741
I
0.857
NV15852
Nasonia vitripennis
NV15852
I
0.881
Ocbimv22002150m.g
Octopus bimaculoides
Ocbimv22002150m.g
I
0.857
Ogr11551
Ophisaurus gracilis
Ogr11551
I
0.857
PHUM129440
Pediculus humanus
PHUM129440
I
0.857
PPAI004805
Phlebotomus papatasi
PPAI004805
I
0.857
SINV15648
Solenopsis invicta
SINV15648
I
0.881
SMAR006706
Strigamia maritima
SMAR006706
I
0.857
TC001473
Tribolium castaneum
TC001473
I
0.857
YQE_05939
Dendroctonus ponderosae
YQE_05939
I
0.857