Bostr.10040s0284 (Boechera stricta)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Bostr.10040s0284 T049051_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
BPE
M01700_2.00
Arabidopsis thaliana
NCACGTNNN

NNNACGTGN
PBM
Weirauch et al.(2014)
pTH7290
0.914 1.000
BPE
M06726_2.00
Arabidopsis thaliana
NNNNNNNNCACGTGNNNNNWB

VWNNNNNCACGTGNNNNNNNN
Dap-seq
OMalley et al.(2016)
bHLH31_col
0.914 1.000
BHLH78
M01713_2.00
Arabidopsis thaliana
GCACGTGC

GCACGTGC
PBM
Weirauch et al.(2014)
pTH7666
0.901 0.882
BHLH49
M01052_2.00
Arabidopsis thaliana
NNCACGTGCN

NGCACGTGNN
PBM
Sullivan et al.(2014)
pTH7309
0.875 0.863
PK06517.1
M01122_2.00
Cannabis sativa
NCACGTGC

GCACGTGN
PBM
Lambert et al.(2019)
pTH10104
0.875 0.863
PK05923.1
M01121_2.00
Cannabis sativa
NNNNNNN

NNNNNNN
PBM
Lambert et al.(2019)
pTH11368
0.868 0.804
gw1.270.82.1
M01758_2.00
Physcomitrella patens
NCACGTGH

DCACGTGN
PBM
Weirauch et al.(2014)
pTH8457
0.862 0.843
BHLH77
M06736_2.00
Arabidopsis thaliana
NKCACGTGVHNWHNB

VNDWNDBCACGTGMN
Dap-seq
OMalley et al.(2016)
bHLH77_col_a
0.862 0.843
BHLH74
M06720_2.00
Arabidopsis thaliana
SDHSDNDNNCACGTGVNNNNW

WNNNNBCACGTGNNHNHSDHS
Dap-seq
OMalley et al.(2016)
bHLH74_col_a
0.862 0.804
BHLH74
M06721_2.00
Arabidopsis thaliana
CACGTGAY

RTCACGTG
Dap-seq
OMalley et al.(2016)
bHLH74_colamp_a
0.862 0.804
BEE2
M01708_2.00
Arabidopsis thaliana
NNCACGTGNN

NNCACGTGNN
PBM
Weirauch et al.(2014)
pTH8094
0.851 0.804
AT2G18300
M01702_2.00
Arabidopsis thaliana
NBCACGTGCNNN

NNNGCACGTGVN
PBM
Weirauch et al.(2014)
pTH7289
0.851 0.784
AT2G18300
M06729_2.00
Arabidopsis thaliana
ACTGGT

ACCAGT
Dap-seq
OMalley et al.(2016)
bHLH64_col_a
0.851 0.784
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.10040s0284.1.p bHLH 145 195

Links

Other bHLH family TFs
Other Boechera stricta TFs

874 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BGIOSGA016635 Oryza indica BGIOSGA016635 N
BRADI5G13900 Brachypodium distachyon BRADI5G13900 N
F775_21073 Aegilops tauschii F775_21073 N
LPERR04G13310 Leersia perrieri LPERR04G13310 N
mgf020565m Mimulus guttatus mgf020565m N
OGLUM04G16630 Oryza glumaepatula OGLUM04G16630 N
OMERI04G13990 Oryza meridionalis OMERI04G13990 N
OPUNC04G14460 Oryza punctata OPUNC04G14460 N
ORGLA04G0137200 Oryza glaberrima ORGLA04G0137200 N
ORUFI04G18090 Oryza rufipogon ORUFI04G18090 N
Pavir.Gb01230 Panicum virgatum Pavir.Gb01230 N
Pavir.Ib01088 Panicum virgatum Pavir.Ib01088 N
Pavir.J03341 Panicum virgatum Pavir.J03341 N
Sb06g020670 Sorghum bicolor Sb06g020670 N
Traes_2AL_73E4240F0 Triticum aestivum Traes_2AL_73E4240F0 N
Traes_2BL_692BF6383 Triticum aestivum Traes_2BL_692BF6383 N
TRIUR3_08260 Triticum urartu TRIUR3_08260 N