Bostr.10040s0284 (Boechera stricta)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Bostr.10040s0284 T049051_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BPE
M01700_2.00 		Arabidopsis thaliana
NCACGTNNN
NNNACGTGN		 PBM
Weirauch et al.(2014)
pTH7290 		0.914 1.000
BPE
M06726_2.00 		Arabidopsis thaliana
NNNNNNNNCACGTGNNNNNWB
VWNNNNNCACGTGNNNNNNNN		 Dap-seq
OMalley et al.(2016)
bHLH31_col 		0.914 1.000
BHLH78
M01713_2.00 		Arabidopsis thaliana
GCACGTGC
GCACGTGC		 PBM
Weirauch et al.(2014)
pTH7666 		0.901 0.882
BHLH49
M01052_2.00 		Arabidopsis thaliana
NNCACGTGCN
NGCACGTGNN		 PBM
Sullivan et al.(2014)
pTH7309 		0.875 0.863
PK06517.1
M01122_2.00 		Cannabis sativa
NCACGTGC
GCACGTGN		 PBM
Lambert et al.(2019)
pTH10104 		0.875 0.863
PK05923.1
M01121_2.00 		Cannabis sativa
NNNNNNN
NNNNNNN		 PBM
Lambert et al.(2019)
pTH11368 		0.868 0.804
gw1.270.82.1
M01758_2.00 		Physcomitrella patens
NCACGTGH
DCACGTGN		 PBM
Weirauch et al.(2014)
pTH8457 		0.862 0.843
BHLH77
M06736_2.00 		Arabidopsis thaliana
NKCACGTGVHNWHNB
VNDWNDBCACGTGMN		 Dap-seq
OMalley et al.(2016)
bHLH77_col_a 		0.862 0.843
BHLH74
M06720_2.00 		Arabidopsis thaliana
SDHSDNDNNCACGTGVNNNNW
WNNNNBCACGTGNNHNHSDHS		 Dap-seq
OMalley et al.(2016)
bHLH74_col_a 		0.862 0.804
BHLH74
M06721_2.00 		Arabidopsis thaliana
CACGTGAY
RTCACGTG		 Dap-seq
OMalley et al.(2016)
bHLH74_colamp_a 		0.862 0.804
BEE2
M01708_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8094 		0.851 0.804
AT2G18300
M01702_2.00 		Arabidopsis thaliana
NBCACGTGCNNN
NNNGCACGTGVN		 PBM
Weirauch et al.(2014)
pTH7289 		0.851 0.784
AT2G18300
M06729_2.00 		Arabidopsis thaliana
ACTGGT
ACCAGT		 Dap-seq
OMalley et al.(2016)
bHLH64_col_a 		0.851 0.784
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.10040s0284.1.p bHLH 145 195

Links

Other bHLH family TFs
Other Boechera stricta TFs

874 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000008160 Ailuropoda melanoleuca ENSAMEG00000008160 I
ENSAMEG00000015853 Ailuropoda melanoleuca ENSAMEG00000015853 I
Alligator_sinensis_CCG012713.1 Alligator sinensis Alligator_sinensis_CCG012713.1 I
Alligator_sinensis_CCG015231.1 Alligator sinensis Alligator_sinensis_CCG015231.1 I
ENSAPLG00000009645 Anas platyrhynchos ENSAPLG00000009645 I
TBX18 Anolis carolinensis ENSACAG00000003859 I
TBX15 Anolis carolinensis ENSACAG00000008131 I
Afo_R005490 Aptenodytes forsteri Afo_R005490 I
ENSAMXG00000004418 Astyanax mexicanus ENSAMXG00000004418 I
ENSAMXG00000005724 Astyanax mexicanus ENSAMXG00000005724 I
ENSAMXG00000013612 Astyanax mexicanus ENSAMXG00000013612 I
ENSP00000358437-D1 Bos grunniens ENSP00000358437-D1 I
ENSP00000358677-D1 Bos grunniens ENSP00000358677-D1 I
ENSP00000362390-D1 Bos grunniens ENSP00000362390-D1 I
TBX18 Bos taurus ENSBTAG00000018161 I
TBX22 Bos taurus ENSBTAG00000048060 I
e_gw.418.20.1 Branchiostoma floridae e_gw.418.20.1 I
estExt_fgenesh2_pg.C_1050030 Branchiostoma floridae estExt_fgenesh2_pg.C_1050030 I
Brh_R004487 Buceros rhinoceros Brh_R004487 I
TBX15 Callithrix jacchus ENSCJAG00000005662 I
TBX18 Callithrix jacchus ENSCJAG00000015218 I
Aan_R001146 Calypte anna Aan_R001146 I
Aan_R004737 Calypte anna Aan_R004737 I
Aan_R013329 Calypte anna Aan_R013329 I
TBX18 Canis familiaris ENSCAFG00000002987 I
TBX15 Canis familiaris ENSCAFG00000009976 I
TBX15 Cavia porcellus ENSCPOG00000000615 I
ENSCPOG00000008004 Cavia porcellus ENSCPOG00000008004 I
Cmyd_10005629 Chelonia mydas Cmyd_10005629 I
Cmyd_10007257 Chelonia mydas Cmyd_10007257 I
Cmyd_10014386 Chelonia mydas Cmyd_10014386 I
ENSCSAG00000001712 Chlorocebus sabaeus ENSCSAG00000001712 I
ENSCSAG00000017375 Chlorocebus sabaeus ENSCSAG00000017375 I
tbx15 Danio rerio ENSDARG00000002582 I
tbx18 Danio rerio ENSDARG00000036930 I
TBX15 Dasypus novemcinctus ENSDNOG00000003930 I
TBX18 Dasypus novemcinctus ENSDNOG00000049259 I
TBX18 Echinops telfairi ENSETEG00000006457 I
TBX18 Equus caballus ENSECAG00000005787 I
TBX15 Equus caballus ENSECAG00000023325 I
TBX15 Erinaceus europaeus ENSEEUG00000003919 I
TBX18 Erinaceus europaeus ENSEEUG00000013766 I
TBX18 Felis catus ENSFCAG00000012657 I
TBX15 Felis catus ENSFCAG00000023731 I
ENSFALG00000002783 Ficedula albicollis ENSFALG00000002783 I
ENSFALG00000005042 Ficedula albicollis ENSFALG00000005042 I
ENSGMOG00000003658 Gadus morhua ENSGMOG00000003658 I
TBX22 Gallus gallus ENSGALG00000004093 I
ENSGALG00000014776 Gallus gallus ENSGALG00000014776 I
ENSGALG00000015834 Gallus gallus ENSGALG00000015834 I
tbx18 Gasterosteus aculeatus ENSGACG00000005602 I
Gfo_R000255 Geospiza fortis Gfo_R000255 I
Gfo_R005492 Geospiza fortis Gfo_R005492 I
TBX15 Gorilla gorilla ENSGGOG00000013468 I
TBX18 Gorilla gorilla ENSGGOG00000027982 I
TBX15 Homo sapiens ENSG00000092607 D
TBX18 Homo sapiens ENSG00000112837 D
ENSSTOG00000013040 Ictidomys tridecemlineatus ENSSTOG00000013040 I
ENSSTOG00000020544 Ictidomys tridecemlineatus ENSSTOG00000020544 I
ENSLACG00000015964 Latimeria chalumnae ENSLACG00000015964 I
ENSLOCG00000011023 Lepisosteus oculatus ENSLOCG00000011023 I
ENSLOCG00000014991 Lepisosteus oculatus ENSLOCG00000014991 I
ENSLOCG00000016254 Lepisosteus oculatus ENSLOCG00000016254 I
TBX18 Loxodonta africana ENSLAFG00000015009 I
TBX15 Loxodonta africana ENSLAFG00000018452 I
ENSP00000358437 Macaca fascicularis ENSP00000358437 I
ENSP00000358677 Macaca fascicularis ENSP00000358677 I
TBX15 Macaca mulatta ENSMMUG00000009257 I
TBX18 Macaca mulatta ENSMMUG00000010599 I
TBX22 Meleagris gallopavo ENSMGAG00000001700 I
TBX18 Meleagris gallopavo ENSMGAG00000013715 I
TBX15 Meleagris gallopavo ENSMGAG00000014235 I
TBX22 Monodelphis domestica ENSMODG00000004255 I
TBX15 Monodelphis domestica ENSMODG00000005319 I
TBX18 Monodelphis domestica ENSMODG00000018361 I
ENSMPUG00000001549 Mustela putorius furo ENSMPUG00000001549 I
ENSMPUG00000005346 Mustela putorius furo ENSMPUG00000005346 I
Tbx15 Mus musculus ENSMUSG00000027868 I
Tbx18 Mus musculus ENSMUSG00000032419 I
Myotis_brandtii_Tbx15_10011211 Myotis brandtii Myotis_brandtii_Tbx15_10011211 I
Myotis_brandtii_TBX18_10024963 Myotis brandtii Myotis_brandtii_TBX18_10024963 I
TBX15 Myotis lucifugus ENSMLUG00000002958 I
TBX18 Myotis lucifugus ENSMLUG00000011326 I
ENSNLEG00000012797 Nomascus leucogenys ENSNLEG00000012797 I
TBX15 Ochotona princeps ENSOPRG00000004847 I
Ogr00863 Ophisaurus gracilis Ogr00863 I
Ogr03354 Ophisaurus gracilis Ogr03354 I
Ogr10944 Ophisaurus gracilis Ogr10944 I
ENSONIG00000001051 Oreochromis niloticus ENSONIG00000001051 I
ENSONIG00000015685 Oreochromis niloticus ENSONIG00000015685 I
TBX18 Oryctolagus cuniculus ENSOCUG00000002026 I
TBX15 Oryctolagus cuniculus ENSOCUG00000012320 I
TBX18 Otolemur garnettii ENSOGAG00000004300 I
TBX15 Otolemur garnettii ENSOGAG00000007282 I
ENSOARG00000013317 Ovis aries ENSOARG00000013317 I
ENSOARG00000020376 Ovis aries ENSOARG00000020376 I
TBX15 Pan troglodytes ENSPTRG00000001172 I
TBX18 Pan troglodytes ENSPTRG00000018390 I
ENSPANG00000004604 Papio anubis ENSPANG00000004604 I
ENSPSIG00000005286 Pelodiscus sinensis ENSPSIG00000005286 I
ENSPSIG00000013362 Pelodiscus sinensis ENSPSIG00000013362 I
ENSPSIG00000017560 Pelodiscus sinensis ENSPSIG00000017560 I
ENSPFOG00000000670 Poecilia formosa ENSPFOG00000000670 I
ENSPFOG00000018033 Poecilia formosa ENSPFOG00000018033 I
Pvit_04496 Pogona vitticeps Pvit_04496 I
Pvit_09354 Pogona vitticeps Pvit_09354 I
ENSPPYG00000000968 Pongo abelii ENSPPYG00000000968 I
ENSPPYG00000016815 Pongo abelii ENSPPYG00000016815 I
TBX15 Procavia capensis ENSPCAG00000016333 I
TBX15 Pteropus vampyrus ENSPVAG00000015733 I
TBX18 Pteropus vampyrus ENSPVAG00000016771 I
Tbx18 Rattus norvegicus ENSRNOG00000010685 I
Tbx15 Rattus norvegicus ENSRNOG00000019565 I
ENSSHAG00000010820 Sarcophilus harrisii ENSSHAG00000010820 I
ENSSHAG00000012785 Sarcophilus harrisii ENSSHAG00000012785 I
ENSSARG00000007424 Sorex araneus ENSSARG00000007424 I
TBX18 Sus scrofa ENSSSCG00000004290 I
ENSSSCG00000006723 Sus scrofa ENSSSCG00000006723 I
TBX22 Taeniopygia guttata ENSTGUG00000002573 I
TBX18 Taeniopygia guttata ENSTGUG00000012504 I
ENSTGUG00000013354 Taeniopygia guttata ENSTGUG00000013354 I
tbx18 Takifugu rubripes ENSTRUG00000001419 I
tbx15 Takifugu rubripes ENSTRUG00000003945 I
tbx18 Tetraodon nigroviridis ENSTNIG00000009690 I
tbx15 Tetraodon nigroviridis ENSTNIG00000015660 I
TBX18 Tupaia belangeri ENSTBEG00000007925 I
TBX18 Tursiops truncatus ENSTTRG00000005713 I
TBX15 Tursiops truncatus ENSTTRG00000011006 I
TBX22 Tursiops truncatus ENSTTRG00000014058 I
TBX18 Vicugna pacos ENSVPAG00000006869 I
ENSVPAG00000010265 Vicugna pacos ENSVPAG00000010265 I
tbx15 Xenopus tropicalis XB-GENE-483924 I
tbx18 Xenopus tropicalis XB-GENE-489907 I
tbx22 Xenopus tropicalis XB-GENE-994522 I
ENSXMAG00000010831 Xiphophorus maculatus ENSXMAG00000010831 I
ENSXMAG00000015062 Xiphophorus maculatus ENSXMAG00000015062 I