CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Bostr.10040s0284
(
Boechera stricta
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Bostr.10040s0284
T049051_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
BPE
M01700_2.00
Arabidopsis thaliana
NCACGTNNN
NNNACGTGN
PBM
Weirauch et al.(2014)
pTH7290
0.914
1.000
BPE
M06726_2.00
Arabidopsis thaliana
NNNNNNNNCACGTGNNNNNWB
VWNNNNNCACGTGNNNNNNNN
Dap-seq
OMalley et al.(2016)
bHLH31_col
0.914
1.000
BHLH78
M01713_2.00
Arabidopsis thaliana
GCACGTGC
GCACGTGC
PBM
Weirauch et al.(2014)
pTH7666
0.901
0.882
BHLH49
M01052_2.00
Arabidopsis thaliana
NNCACGTGCN
NGCACGTGNN
PBM
Sullivan et al.(2014)
pTH7309
0.875
0.863
PK06517.1
M01122_2.00
Cannabis sativa
NCACGTGC
GCACGTGN
PBM
Lambert et al.(2019)
pTH10104
0.875
0.863
PK05923.1
M01121_2.00
Cannabis sativa
NNNNNNN
NNNNNNN
PBM
Lambert et al.(2019)
pTH11368
0.868
0.804
gw1.270.82.1
M01758_2.00
Physcomitrella patens
NCACGTGH
DCACGTGN
PBM
Weirauch et al.(2014)
pTH8457
0.862
0.843
BHLH77
M06736_2.00
Arabidopsis thaliana
NKCACGTGVHNWHNB
VNDWNDBCACGTGMN
Dap-seq
OMalley et al.(2016)
bHLH77_col_a
0.862
0.843
BHLH74
M06720_2.00
Arabidopsis thaliana
SDHSDNDNNCACGTGVNNNNW
WNNNNBCACGTGNNHNHSDHS
Dap-seq
OMalley et al.(2016)
bHLH74_col_a
0.862
0.804
BHLH74
M06721_2.00
Arabidopsis thaliana
CACGTGAY
RTCACGTG
Dap-seq
OMalley et al.(2016)
bHLH74_colamp_a
0.862
0.804
BEE2
M01708_2.00
Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN
PBM
Weirauch et al.(2014)
pTH8094
0.851
0.804
AT2G18300
M01702_2.00
Arabidopsis thaliana
NBCACGTGCNNN
NNNGCACGTGVN
PBM
Weirauch et al.(2014)
pTH7289
0.851
0.784
AT2G18300
M06729_2.00
Arabidopsis thaliana
ACTGGT
ACCAGT
Dap-seq
OMalley et al.(2016)
bHLH64_col_a
0.851
0.784
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bostr.10040s0284.1.p
bHLH
145
195
ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ
Links
Other
bHLH
family TFs
Other
Boechera stricta
TFs
874 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000008160
Ailuropoda melanoleuca
ENSAMEG00000008160
I
ENSAMEG00000015853
Ailuropoda melanoleuca
ENSAMEG00000015853
I
Alligator_sinensis_CCG012713.1
Alligator sinensis
Alligator_sinensis_CCG012713.1
I
Alligator_sinensis_CCG015231.1
Alligator sinensis
Alligator_sinensis_CCG015231.1
I
ENSAPLG00000009645
Anas platyrhynchos
ENSAPLG00000009645
I
TBX18
Anolis carolinensis
ENSACAG00000003859
I
TBX15
Anolis carolinensis
ENSACAG00000008131
I
Afo_R005490
Aptenodytes forsteri
Afo_R005490
I
ENSAMXG00000004418
Astyanax mexicanus
ENSAMXG00000004418
I
ENSAMXG00000005724
Astyanax mexicanus
ENSAMXG00000005724
I
ENSAMXG00000013612
Astyanax mexicanus
ENSAMXG00000013612
I
ENSP00000358437-D1
Bos grunniens
ENSP00000358437-D1
I
ENSP00000358677-D1
Bos grunniens
ENSP00000358677-D1
I
ENSP00000362390-D1
Bos grunniens
ENSP00000362390-D1
I
TBX18
Bos taurus
ENSBTAG00000018161
I
TBX22
Bos taurus
ENSBTAG00000048060
I
e_gw.418.20.1
Branchiostoma floridae
e_gw.418.20.1
I
estExt_fgenesh2_pg.C_1050030
Branchiostoma floridae
estExt_fgenesh2_pg.C_1050030
I
Brh_R004487
Buceros rhinoceros
Brh_R004487
I
TBX15
Callithrix jacchus
ENSCJAG00000005662
I
TBX18
Callithrix jacchus
ENSCJAG00000015218
I
Aan_R001146
Calypte anna
Aan_R001146
I
Aan_R004737
Calypte anna
Aan_R004737
I
Aan_R013329
Calypte anna
Aan_R013329
I
TBX18
Canis familiaris
ENSCAFG00000002987
I
TBX15
Canis familiaris
ENSCAFG00000009976
I
TBX15
Cavia porcellus
ENSCPOG00000000615
I
ENSCPOG00000008004
Cavia porcellus
ENSCPOG00000008004
I
Cmyd_10005629
Chelonia mydas
Cmyd_10005629
I
Cmyd_10007257
Chelonia mydas
Cmyd_10007257
I
Cmyd_10014386
Chelonia mydas
Cmyd_10014386
I
ENSCSAG00000001712
Chlorocebus sabaeus
ENSCSAG00000001712
I
ENSCSAG00000017375
Chlorocebus sabaeus
ENSCSAG00000017375
I
tbx15
Danio rerio
ENSDARG00000002582
I
tbx18
Danio rerio
ENSDARG00000036930
I
TBX15
Dasypus novemcinctus
ENSDNOG00000003930
I
TBX18
Dasypus novemcinctus
ENSDNOG00000049259
I
TBX18
Echinops telfairi
ENSETEG00000006457
I
TBX18
Equus caballus
ENSECAG00000005787
I
TBX15
Equus caballus
ENSECAG00000023325
I
TBX15
Erinaceus europaeus
ENSEEUG00000003919
I
TBX18
Erinaceus europaeus
ENSEEUG00000013766
I
TBX18
Felis catus
ENSFCAG00000012657
I
TBX15
Felis catus
ENSFCAG00000023731
I
ENSFALG00000002783
Ficedula albicollis
ENSFALG00000002783
I
ENSFALG00000005042
Ficedula albicollis
ENSFALG00000005042
I
ENSGMOG00000003658
Gadus morhua
ENSGMOG00000003658
I
TBX22
Gallus gallus
ENSGALG00000004093
I
ENSGALG00000014776
Gallus gallus
ENSGALG00000014776
I
ENSGALG00000015834
Gallus gallus
ENSGALG00000015834
I
tbx18
Gasterosteus aculeatus
ENSGACG00000005602
I
Gfo_R000255
Geospiza fortis
Gfo_R000255
I
Gfo_R005492
Geospiza fortis
Gfo_R005492
I
TBX15
Gorilla gorilla
ENSGGOG00000013468
I
TBX18
Gorilla gorilla
ENSGGOG00000027982
I
TBX15
Homo sapiens
ENSG00000092607
D
TBX18
Homo sapiens
ENSG00000112837
D
ENSSTOG00000013040
Ictidomys tridecemlineatus
ENSSTOG00000013040
I
ENSSTOG00000020544
Ictidomys tridecemlineatus
ENSSTOG00000020544
I
ENSLACG00000015964
Latimeria chalumnae
ENSLACG00000015964
I
ENSLOCG00000011023
Lepisosteus oculatus
ENSLOCG00000011023
I
ENSLOCG00000014991
Lepisosteus oculatus
ENSLOCG00000014991
I
ENSLOCG00000016254
Lepisosteus oculatus
ENSLOCG00000016254
I
TBX18
Loxodonta africana
ENSLAFG00000015009
I
TBX15
Loxodonta africana
ENSLAFG00000018452
I
ENSP00000358437
Macaca fascicularis
ENSP00000358437
I
ENSP00000358677
Macaca fascicularis
ENSP00000358677
I
TBX15
Macaca mulatta
ENSMMUG00000009257
I
TBX18
Macaca mulatta
ENSMMUG00000010599
I
TBX22
Meleagris gallopavo
ENSMGAG00000001700
I
TBX18
Meleagris gallopavo
ENSMGAG00000013715
I
TBX15
Meleagris gallopavo
ENSMGAG00000014235
I
TBX22
Monodelphis domestica
ENSMODG00000004255
I
TBX15
Monodelphis domestica
ENSMODG00000005319
I
TBX18
Monodelphis domestica
ENSMODG00000018361
I
ENSMPUG00000001549
Mustela putorius furo
ENSMPUG00000001549
I
ENSMPUG00000005346
Mustela putorius furo
ENSMPUG00000005346
I
Tbx15
Mus musculus
ENSMUSG00000027868
I
Tbx18
Mus musculus
ENSMUSG00000032419
I
Myotis_brandtii_Tbx15_10011211
Myotis brandtii
Myotis_brandtii_Tbx15_10011211
I
Myotis_brandtii_TBX18_10024963
Myotis brandtii
Myotis_brandtii_TBX18_10024963
I
TBX15
Myotis lucifugus
ENSMLUG00000002958
I
TBX18
Myotis lucifugus
ENSMLUG00000011326
I
ENSNLEG00000012797
Nomascus leucogenys
ENSNLEG00000012797
I
TBX15
Ochotona princeps
ENSOPRG00000004847
I
Ogr00863
Ophisaurus gracilis
Ogr00863
I
Ogr03354
Ophisaurus gracilis
Ogr03354
I
Ogr10944
Ophisaurus gracilis
Ogr10944
I
ENSONIG00000001051
Oreochromis niloticus
ENSONIG00000001051
I
ENSONIG00000015685
Oreochromis niloticus
ENSONIG00000015685
I
TBX18
Oryctolagus cuniculus
ENSOCUG00000002026
I
TBX15
Oryctolagus cuniculus
ENSOCUG00000012320
I
TBX18
Otolemur garnettii
ENSOGAG00000004300
I
TBX15
Otolemur garnettii
ENSOGAG00000007282
I
ENSOARG00000013317
Ovis aries
ENSOARG00000013317
I
ENSOARG00000020376
Ovis aries
ENSOARG00000020376
I
TBX15
Pan troglodytes
ENSPTRG00000001172
I
TBX18
Pan troglodytes
ENSPTRG00000018390
I
ENSPANG00000004604
Papio anubis
ENSPANG00000004604
I
ENSPSIG00000005286
Pelodiscus sinensis
ENSPSIG00000005286
I
ENSPSIG00000013362
Pelodiscus sinensis
ENSPSIG00000013362
I
ENSPSIG00000017560
Pelodiscus sinensis
ENSPSIG00000017560
I
ENSPFOG00000000670
Poecilia formosa
ENSPFOG00000000670
I
ENSPFOG00000018033
Poecilia formosa
ENSPFOG00000018033
I
Pvit_04496
Pogona vitticeps
Pvit_04496
I
Pvit_09354
Pogona vitticeps
Pvit_09354
I
ENSPPYG00000000968
Pongo abelii
ENSPPYG00000000968
I
ENSPPYG00000016815
Pongo abelii
ENSPPYG00000016815
I
TBX15
Procavia capensis
ENSPCAG00000016333
I
TBX15
Pteropus vampyrus
ENSPVAG00000015733
I
TBX18
Pteropus vampyrus
ENSPVAG00000016771
I
Tbx18
Rattus norvegicus
ENSRNOG00000010685
I
Tbx15
Rattus norvegicus
ENSRNOG00000019565
I
ENSSHAG00000010820
Sarcophilus harrisii
ENSSHAG00000010820
I
ENSSHAG00000012785
Sarcophilus harrisii
ENSSHAG00000012785
I
ENSSARG00000007424
Sorex araneus
ENSSARG00000007424
I
TBX18
Sus scrofa
ENSSSCG00000004290
I
ENSSSCG00000006723
Sus scrofa
ENSSSCG00000006723
I
TBX22
Taeniopygia guttata
ENSTGUG00000002573
I
TBX18
Taeniopygia guttata
ENSTGUG00000012504
I
ENSTGUG00000013354
Taeniopygia guttata
ENSTGUG00000013354
I
tbx18
Takifugu rubripes
ENSTRUG00000001419
I
tbx15
Takifugu rubripes
ENSTRUG00000003945
I
tbx18
Tetraodon nigroviridis
ENSTNIG00000009690
I
tbx15
Tetraodon nigroviridis
ENSTNIG00000015660
I
TBX18
Tupaia belangeri
ENSTBEG00000007925
I
TBX18
Tursiops truncatus
ENSTTRG00000005713
I
TBX15
Tursiops truncatus
ENSTTRG00000011006
I
TBX22
Tursiops truncatus
ENSTTRG00000014058
I
TBX18
Vicugna pacos
ENSVPAG00000006869
I
ENSVPAG00000010265
Vicugna pacos
ENSVPAG00000010265
I
tbx15
Xenopus tropicalis
XB-GENE-483924
I
tbx18
Xenopus tropicalis
XB-GENE-489907
I
tbx22
Xenopus tropicalis
XB-GENE-994522
I
ENSXMAG00000010831
Xiphophorus maculatus
ENSXMAG00000010831
I
ENSXMAG00000015062
Xiphophorus maculatus
ENSXMAG00000015062
I