CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bostr.20505s0056
(
Boechera stricta
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Bostr.20505s0056
T049102_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bostr.20505s0056.1.p
bHLH
73
125
KKLNHNASERDRRKKINSLFSSLRSCLPASDQSKKLSIPETVSRSLKYIPELQ
Links
Other
bHLH
family TFs
Other
Boechera stricta
TFs
37 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo01495s010
Brassica oleracea
Bo01495s010
N
0.888
Bo4g112590
Brassica oleracea
Bo4g112590
N
0.888
Bra014654
Brassica rapa
Bra014654
N
0.888
Bra014657
Brassica rapa
Bra014657
N
0.888
Bra014658
Brassica rapa
Bra014658
N
0.888
BHLH039
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_5001751
N
0.888
Bostr.20505s0055
Boechera stricta
Bostr.20505s0055
N
0.888
Cagra.0578s0028
Capsella grandiflora
Cagra.0578s0028
N
0.888
Carubv10017770m.g
Capsella rubella
Carubv10017770m.g
N
0.888
Cagra.0578s0027
Capsella grandiflora
Cagra.0578s0027
N
0.886
Carubv10019130m.g
Capsella rubella
Carubv10019130m.g
N
0.886
Thhalv10006189m.g
Eutrema salsugineum
Thhalv10006189m.g
N
0.885
Thhalv10006191m.g
Eutrema salsugineum
Thhalv10006191m.g
N
0.885
Bo6g072500
Brassica oleracea
Bo6g072500
N
0.876
Bra003260
Brassica rapa
Bra003260
N
0.876
Bo6g072510
Brassica oleracea
Bo6g072510
N
0.875
ORG2
Arabidopsis thaliana
AT3G56970
N
0.873
BHLH038
Arabidopsis lyrata
fgenesh2_kg.5__2132__AT3G56970.1
N
0.863
MDP0000641681
Malus domestica
MDP0000641681
N
0.856
27751.m000169
Ricinus communis
27751.m000169
N
0.855
Pm028948
Prunus mume
Pm028948
N
0.853
POPTR_0016s03680
Populus trichocarpa
POPTR_0016s03680
N
0.850
VIT_08s0007g05300
Vitis vinifera
VIT_08s0007g05300
N
0.850
SapurV1A.0159s0010
Salix purpurea
SapurV1A.0159s0010
N
0.850
SapurV1A.0196s0430
Salix purpurea
SapurV1A.0196s0430
N
0.850
POPTR_0006s03560
Populus trichocarpa
POPTR_0006s03560
N
0.848
POPTR_0006s03590
Populus trichocarpa
POPTR_0006s03590
N
0.848
SapurV1A.0196s0420
Salix purpurea
SapurV1A.0196s0420
N
0.848
Bo4g112570
Brassica oleracea
Bo4g112570
N
0.847
Cucsa.371810
Cucumis sativus
Cucsa.371810
N
0.846
Pm031098
Prunus mume
Pm031098
N
0.844
Bra003261
Brassica rapa
Bra003261
N
0.840
PRUPE_ppa018670mg
Prunus persica
PRUPE_ppa018670mg
N
0.840
Pm031103
Prunus mume
Pm031103
N
0.840
ORG3
Arabidopsis thaliana
AT3G56980
N
0.838
PRUPE_ppa024966mg
Prunus persica
PRUPE_ppa024966mg
N
0.838
Pm028949
Prunus mume
Pm028949
N
0.838