Bostr.25993s0551 (Boechera stricta)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Bostr.25993s0551 T049131_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT2G42280
M06733_2.00 		Arabidopsis thaliana
DNCMACTTGYH
DRCAAGTKGNH		 Dap-seq
OMalley et al.(2016)
bHLH130_col_a 		0.893 0.980
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.25993s0551.1.p bHLH 291 341

Links

Other bHLH family TFs
Other Boechera stricta TFs

90 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AT2G42280 Arabidopsis thaliana AT2G42280 D 0.893
POPTR_0003s22290 Populus trichocarpa POPTR_0003s22290 I 0.893
scaffold_403077.1 Arabidopsis lyrata scaffold_403077.1 I 0.893
VIT_06s0004g01740 Vitis vinifera VIT_06s0004g01740 I 0.893
30169.m006403 Ricinus communis 30169.m006403 I 0.893
Cagra.2636s0012 Capsella grandiflora Cagra.2636s0012 I 0.893
Carubv10023498m.g Capsella rubella Carubv10023498m.g I 0.893
MDP0000307685 Malus domestica MDP0000307685 I 0.893
SapurV1A.0009s0400 Salix purpurea SapurV1A.0009s0400 I 0.893
LPERR08G16800 Leersia perrieri LPERR08G16800 I 0.881
LPERR09G10800 Leersia perrieri LPERR09G10800 I 0.881
e_gw1.272.41.1 Physcomitrella patens e_gw1.272.41.1 I 0.880
BGIOSGA016651 Oryza indica BGIOSGA016651 I 0.865
BRADI3G48070 Brachypodium distachyon BRADI3G48070 I 0.865
LPERR04G13560 Leersia perrieri LPERR04G13560 I 0.865
MLOC_12058 Hordeum vulgare MLOC_12058 I 0.865
OB04G24170 Oryza brachyantha OB04G24170 I 0.865
OBART04G16900 Oryza barthii OBART04G16900 I 0.865
OGLUM04G16920 Oryza glumaepatula OGLUM04G16920 I 0.865
OMERI04G14260 Oryza meridionalis OMERI04G14260 I 0.865
ONIVA04G15000 Oryza nivara ONIVA04G15000 I 0.865
OPUNC04G14700 Oryza punctata OPUNC04G14700 I 0.865
ORGLA04G0140000 Oryza glaberrima ORGLA04G0140000 I 0.865
ORUFI04G18350 Oryza rufipogon ORUFI04G18350 I 0.865
OS04G0489600 Oryza sativa OS04G0489600 I 0.865
BGIOSGA004992 Oryza indica BGIOSGA004992 I 0.861
BRADI2G57800 Brachypodium distachyon BRADI2G57800 I 0.861
F775_24576 Aegilops tauschii F775_24576 I 0.861
LPERR01G35240 Leersia perrieri LPERR01G35240 I 0.861
MLOC_20318 Hordeum vulgare MLOC_20318 I 0.861
OB01G49420 Oryza brachyantha OB01G49420 I 0.861
OBART01G40680 Oryza barthii OBART01G40680 I 0.861
OGLUM01G44860 Oryza glumaepatula OGLUM01G44860 I 0.861
OLONG_004619 Oryza longistaminata OLONG_004619 I 0.861
OMERI01G37660 Oryza meridionalis OMERI01G37660 I 0.861
ONIVA01G45730 Oryza nivara ONIVA01G45730 I 0.861
OPUNC01G39450 Oryza punctata OPUNC01G39450 I 0.861
ORGLA01G0346300 Oryza glaberrima ORGLA01G0346300 I 0.861
ORUFI01G44010 Oryza rufipogon ORUFI01G44010 I 0.861
OS01G0900800 Oryza sativa OS01G0900800 I 0.861
Traes_3AL_B68C491B0 Triticum aestivum Traes_3AL_B68C491B0 I 0.861
TRAES3BF135900010CFD_g Triticum aestivum TRAES3BF135900010CFD_g I 0.861
TRIUR3_33816 Triticum urartu TRIUR3_33816 I 0.861
Ca_07284 Cicer arietinum Ca_07284 I 0.860
Bo4g015860 Brassica oleracea Bo4g015860 I 0.858
Bra004678 Brassica rapa Bra004678 I 0.858
MTR_1g052470 Medicago truncatula MTR_1g052470 I 0.858
MTR_4g065870 Medicago truncatula MTR_4g065870 I 0.858
Ca_18899 Cicer arietinum Ca_18899 I 0.858
Cla006394 Citrullus lanatus Cla006394 I 0.858
Cucsa.143260 Cucumis sativus Cucsa.143260 I 0.858
e_gw1.83.237.1 Physcomitrella patens e_gw1.83.237.1 I 0.858
mgf016092m Mimulus guttatus mgf016092m I 0.858
MTR_7g092540 Medicago truncatula MTR_7g092540 I 0.854
Bo5g006980 Brassica oleracea Bo5g006980 I 0.848
Bo5g007030 Brassica oleracea Bo5g007030 I 0.848
Bra015456 Brassica rapa Bra015456 I 0.848
Eucgr.A00213 Eucalyptus grandis Eucgr.A00213 I 0.848
Lus10025518.g Linum usitatissimum Lus10025518.g I 0.848
Lus10026733.g Linum usitatissimum Lus10026733.g I 0.848
PDK_20s1546591g001 Phoenix dactylifera PDK_20s1546591g001 I 0.848
BRADI4G33670 Brachypodium distachyon BRADI4G33670 I 0.846
GRMZM2G142932 Zea mays GRMZM2G142932 I 0.846
GRMZM2G153454 Zea mays GRMZM2G153454 I 0.846
MLOC_30102 Hordeum vulgare MLOC_30102 I 0.846
Sb07g027810 Sorghum bicolor Sb07g027810 I 0.846
Si013950m.g Setaria italica Si013950m.g I 0.846
Si030166m.g Setaria italica Si030166m.g I 0.846
Traes_5BL_4317E525B Triticum aestivum Traes_5BL_4317E525B I 0.846
Pavir.Ba00676 Panicum virgatum Pavir.Ba00676 I 0.846
Pavir.Bb03157 Panicum virgatum Pavir.Bb03157 I 0.846
Pavir.Fa00493 Panicum virgatum Pavir.Fa00493 I 0.846
Pavir.J25484 Panicum virgatum Pavir.J25484 I 0.846
BHLH128 Arabidopsis thaliana AT1G05805 I 0.845
F775_26506 Aegilops tauschii F775_26506 I 0.845
fgenesh2_kg.1__542__AT1G05805.1 Arabidopsis lyrata fgenesh2_kg.1__542__AT1G05805.1 I 0.845
MTR_1g116790 Medicago truncatula MTR_1g116790 I 0.845
Traes_6AL_9437F730F Triticum aestivum Traes_6AL_9437F730F I 0.845
Traes_6BL_868408DFC Triticum aestivum Traes_6BL_868408DFC I 0.845
Traes_6DL_62A15AED6 Triticum aestivum Traes_6DL_62A15AED6 I 0.845
TRIUR3_16394 Triticum urartu TRIUR3_16394 I 0.845
Ca_14007 Cicer arietinum Ca_14007 I 0.845
Cucsa.094340 Cucumis sativus Cucsa.094340 I 0.845
Bostr.25219s0385 Boechera stricta Bostr.25219s0385 I 0.845
Cagra.1671s0210 Capsella grandiflora Cagra.1671s0210 I 0.845
Carubv10009382m.g Capsella rubella Carubv10009382m.g I 0.845
Ciclev10020681m.g Citrus clementina Ciclev10020681m.g I 0.845
orange1.1g038558m.g Citrus sinensis orange1.1g038558m.g I 0.845
Thhalv10008050m.g Eutrema salsugineum Thhalv10008050m.g I 0.845
SapurV1A.0850s0170 Salix purpurea SapurV1A.0850s0170 I 0.840