CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.0568s0165
(
Capsella grandiflora
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Cagra.0568s0165
T049210_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.0568s0165.1.p
bHLH
70
122
KRAKHKDIERQRRQEATTLYKSLRFILPSHYIKGKRSSSDHVEEAGNYIKDLQ
Links
Other
bHLH
family TFs
Other
Capsella grandiflora
TFs
29 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Carubv10011792m.g
Capsella rubella
Carubv10011792m.g
N
0.914
POPTR_0012s14080
Populus trichocarpa
POPTR_0012s14080
I
0.872
Solyc06g035490.2
Solanum lycopersicum
Solyc06g035490.2
I
0.872
cassava43207.valid.m1
Manihot esculenta
cassava43207.valid.m1
I
0.872
Bostr.15774s0324
Boechera stricta
Bostr.15774s0324
I
0.872
Cagra.0277s0021
Capsella grandiflora
Cagra.0277s0021
I
0.872
Carubv10027166m.g
Capsella rubella
Carubv10027166m.g
I
0.872
Bostr.13671s0206
Boechera stricta
Bostr.13671s0206
I
0.871
Ca_22233
Cicer arietinum
Ca_22233
I
0.860
Pm019419
Prunus mume
Pm019419
I
0.860
PK15358.1
Cannabis sativa
PK15358.1
I
0.860
LjSGA_023375.1
Lotus japonicus
LjSGA_023375.1
I
0.860
cassava45968.m1
Manihot esculenta
cassava45968.m1
I
0.859
AT5G51780
Arabidopsis thaliana
AT5G51780
I
0.851
Bo7g110280
Brassica oleracea
Bo7g110280
I
0.851
fgenesh2_kg.8__1059__AT5G51780.1
Arabidopsis lyrata
fgenesh2_kg.8__1059__AT5G51780.1
I
0.851
Thhalv10026341m.g
Eutrema salsugineum
Thhalv10026341m.g
I
0.851
cassava21379.m1
Manihot esculenta
cassava21379.m1
I
0.848
Ciclev10006628m.g
Citrus clementina
Ciclev10006628m.g
I
0.848
orange1.1g036406m.g
Citrus sinensis
orange1.1g036406m.g
I
0.848
TCM_016133
Theobroma cacao
TCM_016133
I
0.844
TCM_016134
Theobroma cacao
TCM_016134
I
0.844
GLYMA09G27610
Glycine max
GLYMA09G27610
I
0.840
GLYMA16G32610
Glycine max
GLYMA16G32610
I
0.840
MTR_0007s0330
Medicago truncatula
MTR_0007s0330
N
0.840
MDP0000246258
Malus domestica
MDP0000246258
I
0.840
Thhalv10009922m.g
Eutrema salsugineum
Thhalv10009922m.g
I
0.840
PK11667.1
Cannabis sativa
PK11667.1
I
0.840
Bra019167
Brassica rapa
Bra019167
I
0.839