Cagra.0578s0028 (Capsella grandiflora)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Cagra.0578s0028 T049214_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.0578s0028.1.p bHLH 77 129

Links

Other bHLH family TFs
Other Capsella grandiflora TFs

45 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BHLH039 Arabidopsis lyrata fgenesh1_pm.C_scaffold_5001751 N 0.914
Bostr.20505s0055 Boechera stricta Bostr.20505s0055 N 0.914
Carubv10017770m.g Capsella rubella Carubv10017770m.g N 0.914
Bo01495s010 Brassica oleracea Bo01495s010 N 0.888
Bo4g112590 Brassica oleracea Bo4g112590 N 0.888
Bra014654 Brassica rapa Bra014654 N 0.888
Bra014657 Brassica rapa Bra014657 N 0.888
Bra014658 Brassica rapa Bra014658 N 0.888
Bostr.20505s0056 Boechera stricta Bostr.20505s0056 N 0.888
Thhalv10006189m.g Eutrema salsugineum Thhalv10006189m.g N 0.885
Thhalv10006191m.g Eutrema salsugineum Thhalv10006191m.g N 0.885
27751.m000169 Ricinus communis 27751.m000169 N 0.881
SapurV1A.0159s0010 Salix purpurea SapurV1A.0159s0010 N 0.877
SapurV1A.0196s0430 Salix purpurea SapurV1A.0196s0430 N 0.877
Bo6g072500 Brassica oleracea Bo6g072500 N 0.876
Bra003260 Brassica rapa Bra003260 N 0.876
Bo6g072510 Brassica oleracea Bo6g072510 N 0.875
POPTR_0006s03560 Populus trichocarpa POPTR_0006s03560 N 0.875
Cucsa.371810 Cucumis sativus Cucsa.371810 N 0.872
Pm031098 Prunus mume Pm031098 N 0.871
ORG3 Arabidopsis thaliana AT3G56980 N 0.864
TCM_024315 Theobroma cacao TCM_024315 N 0.860
Cagra.0578s0027 Capsella grandiflora Cagra.0578s0027 N 0.860
Carubv10019130m.g Capsella rubella Carubv10019130m.g N 0.860
MDP0000641681 Malus domestica MDP0000641681 N 0.856
Thhalv10006491m.g Eutrema salsugineum Thhalv10006491m.g N 0.856
Pm028948 Prunus mume Pm028948 N 0.853
MTR_1g048720 Medicago truncatula MTR_1g048720 N 0.852
POPTR_0016s03680 Populus trichocarpa POPTR_0016s03680 N 0.850
VIT_08s0007g05300 Vitis vinifera VIT_08s0007g05300 N 0.850
POPTR_0006s03590 Populus trichocarpa POPTR_0006s03590 N 0.848
Cla001676 Citrullus lanatus Cla001676 N 0.848
SapurV1A.0196s0420 Salix purpurea SapurV1A.0196s0420 N 0.848
Bo4g112570 Brassica oleracea Bo4g112570 N 0.847
Ciclev10006413m.g Citrus clementina Ciclev10006413m.g N 0.847
orange1.1g025477m.g Citrus sinensis orange1.1g025477m.g N 0.847
ORG2 Arabidopsis thaliana AT3G56970 N 0.846
Bra003261 Brassica rapa Bra003261 N 0.840
PRUPE_ppa018670mg Prunus persica PRUPE_ppa018670mg N 0.840
Pm031103 Prunus mume Pm031103 N 0.840
gene27422-v1.0-hybrid Fragaria vesca gene27422-v1.0-hybrid N 0.839
GLYMA03G28630 Glycine max GLYMA03G28630 N 0.838
GLYMA19G31361 Glycine max GLYMA19G31361 N 0.838
PRUPE_ppa024966mg Prunus persica PRUPE_ppa024966mg N 0.838
Pm028949 Prunus mume Pm028949 N 0.838