Carubv10011063m.g (Capsella rubella)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Carubv10011063m.g T049376_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10011063m bHLH 140 187

Links

Other bHLH family TFs
Other Capsella rubella TFs

61 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BHLH52 Arabidopsis thaliana AT1G30670 N 0.914
fgenesh1_pm.C_scaffold_1002485 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1002485 N 0.914
Cagra.1508s0136 Capsella grandiflora Cagra.1508s0136 N 0.914
Bostr.15697s0367 Boechera stricta Bostr.15697s0367 N 0.902
Al_scaffold_0004_1965 Arabidopsis lyrata Al_scaffold_0004_1965 N 0.901
BHLH53 Arabidopsis thaliana AT2G34820 N 0.901
Bo3g028090 Brassica oleracea Bo3g028090 N 0.901
Bo4g039270 Brassica oleracea Bo4g039270 N 0.901
Bra005389 Brassica rapa Bra005389 N 0.901
Bostr.23794s0621 Boechera stricta Bostr.23794s0621 N 0.901
Thhalv10017751m.g Eutrema salsugineum Thhalv10017751m.g N 0.901
Bra022993 Brassica rapa Bra022993 N 0.899
PRUPE_ppa017597mg Prunus persica PRUPE_ppa017597mg N 0.890
Pm010610 Prunus mume Pm010610 N 0.890
Bo4g182930 Brassica oleracea Bo4g182930 N 0.881
Bra021933 Brassica rapa Bra021933 N 0.881
Lus10038432.g Linum usitatissimum Lus10038432.g N 0.881
BRADI4G29370 Brachypodium distachyon BRADI4G29370 N 0.880
F775_52642 Aegilops tauschii F775_52642 N 0.880
Traes_5BL_B55F708EC Triticum aestivum Traes_5BL_B55F708EC N 0.880
Traes_5DL_84C86F76D Triticum aestivum Traes_5DL_84C86F76D N 0.880
Thhalv10009765m.g Eutrema salsugineum Thhalv10009765m.g N 0.879
Si038598m.g Setaria italica Si038598m.g N 0.877
Ciclev10017579m.g Citrus clementina Ciclev10017579m.g N 0.877
orange1.1g041370m.g Citrus sinensis orange1.1g041370m.g N 0.877
Lus10005451.g Linum usitatissimum Lus10005451.g N 0.875
OB07G14260 Oryza brachyantha OB07G14260 N 0.869
GLYMA15G41400 Glycine max GLYMA15G41400 N 0.866
GSMUA_Achr11G16900_001 Musa acuminata GSMUA_Achr11G16900_001 N 0.866
GSMUA_AchrUn_randomG20690_001 Musa acuminata GSMUA_AchrUn_randomG20690_001 N 0.866
MTR_1g060700 Medicago truncatula MTR_1g060700 N 0.864
MTR_2g067000 Medicago truncatula MTR_2g067000 N 0.864
gene20146-v1.0-hybrid Fragaria vesca gene20146-v1.0-hybrid N 0.858
BGIOSGA037431 Oryza indica BGIOSGA037431 N 0.856
OB12G20560 Oryza brachyantha OB12G20560 N 0.856
OGLUM12G14400 Oryza glumaepatula OGLUM12G14400 N 0.856
ONIVA12G13030 Oryza nivara ONIVA12G13030 N 0.856
OPUNC12G11490 Oryza punctata OPUNC12G11490 N 0.856
ORGLA12G0114800 Oryza glaberrima ORGLA12G0114800 N 0.856
ORUFI12G13970 Oryza rufipogon ORUFI12G13970 N 0.856
Sb01g048400 Sorghum bicolor Sb01g048400 N 0.856
Pavir.Ca01783 Panicum virgatum Pavir.Ca01783 N 0.856
Pavir.Ca01784 Panicum virgatum Pavir.Ca01784 N 0.856
Pavir.Ia04589 Panicum virgatum Pavir.Ia04589 N 0.856
POPTR_0001s46530 Populus trichocarpa POPTR_0001s46530 N 0.855
POPTR_0011s16100 Populus trichocarpa POPTR_0011s16100 N 0.855
VIT_10s0092g00030 Vitis vinifera VIT_10s0092g00030 N 0.855
cassava27522.m1 Manihot esculenta cassava27522.m1 N 0.855
evm.TU.supercontig_489.5 Carica papaya evm.TU.supercontig_489.5 N 0.855
evm.TU.supercontig_489.6 Carica papaya evm.TU.supercontig_489.6 N 0.855
SapurV1A.0527s0040 Salix purpurea SapurV1A.0527s0040 N 0.855
TCM_033386 Theobroma cacao TCM_033386 N 0.853
Ca_13608 Cicer arietinum Ca_13608 N 0.853
Ca_13610 Cicer arietinum Ca_13610 N 0.853
Eucgr.D01630 Eucalyptus grandis Eucgr.D01630 N 0.853
gene18542-v1.0-hybrid Fragaria vesca gene18542-v1.0-hybrid N 0.853
MDP0000209483 Malus domestica MDP0000209483 N 0.853
MDP0000280921 Malus domestica MDP0000280921 N 0.853
SapurV1A.0602s0120 Salix purpurea SapurV1A.0602s0120 N 0.853
MDP0000791364 Malus domestica MDP0000791364 N 0.846
GRMZM2G137374 Zea mays GRMZM2G137374 N 0.845