Carubv10011792m.g (Capsella rubella)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Carubv10011792m.g T049381_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10011792m bHLH 70 122

Links

Other bHLH family TFs
Other Capsella rubella TFs

29 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
fgenesh2_kg.8__1059__AT5G51780.1 Arabidopsis lyrata fgenesh2_kg.8__1059__AT5G51780.1 I 0.851
AT5G51780 Arabidopsis thaliana AT5G51780 I 0.851
Bostr.15774s0324 Boechera stricta Bostr.15774s0324 I 0.872
Bostr.13671s0206 Boechera stricta Bostr.13671s0206 I 0.871
Bo7g110280 Brassica oleracea Bo7g110280 I 0.851
Bra019167 Brassica rapa Bra019167 I 0.839
PK15358.1 Cannabis sativa PK15358.1 I 0.860
PK11667.1 Cannabis sativa PK11667.1 I 0.840
Cagra.0277s0021 Capsella grandiflora Cagra.0277s0021 I 0.872
Cagra.0568s0165 Capsella grandiflora Cagra.0568s0165 N 0.914
Carubv10027166m.g Capsella rubella Carubv10027166m.g I 0.872
Ca_22233 Cicer arietinum Ca_22233 I 0.860
Ciclev10006628m.g Citrus clementina Ciclev10006628m.g I 0.848
orange1.1g036406m.g Citrus sinensis orange1.1g036406m.g I 0.848
Thhalv10009922m.g Eutrema salsugineum Thhalv10009922m.g I 0.840
Thhalv10026341m.g Eutrema salsugineum Thhalv10026341m.g I 0.851
GLYMA16G32610 Glycine max GLYMA16G32610 I 0.840
GLYMA09G27610 Glycine max GLYMA09G27610 I 0.840
LjSGA_023375.1 Lotus japonicus LjSGA_023375.1 I 0.860
MDP0000246258 Malus domestica MDP0000246258 I 0.840
cassava45968.m1 Manihot esculenta cassava45968.m1 I 0.859
cassava43207.valid.m1 Manihot esculenta cassava43207.valid.m1 I 0.872
cassava21379.m1 Manihot esculenta cassava21379.m1 I 0.848
MTR_0007s0330 Medicago truncatula MTR_0007s0330 N 0.840
POPTR_0012s14080 Populus trichocarpa POPTR_0012s14080 I 0.872
Pm019419 Prunus mume Pm019419 I 0.860
Solyc06g035490.2 Solanum lycopersicum Solyc06g035490.2 I 0.872
TCM_016134 Theobroma cacao TCM_016134 I 0.844
TCM_016133 Theobroma cacao TCM_016133 I 0.844