Carubv10023610m.g (Capsella rubella)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Carubv10023610m.g T049433_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10023610m bHLH 137 185

Links

Other bHLH family TFs
Other Capsella rubella TFs

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
NAI1 Arabidopsis thaliana AT2G22770 N 0.914
NAI1 Arabidopsis lyrata fgenesh2_kg.4__198__AT2G22770.1 N 0.914
Bostr.19427s0044 Boechera stricta Bostr.19427s0044 N 0.914
Cagra.0882s0006 Capsella grandiflora Cagra.0882s0006 N 0.914
Thhalv10000251m.g Eutrema salsugineum Thhalv10000251m.g N 0.901
Bo4g151030 Brassica oleracea Bo4g151030 I 0.875
Bo8g100870 Brassica oleracea Bo8g100870 I 0.875
Bra030207 Brassica rapa Bra030207 I 0.875
Bra039927 Brassica rapa Bra039927 I 0.875
LPERR12G15010 Leersia perrieri LPERR12G15010 N 0.865
Ca_05320 Cicer arietinum Ca_05320 I 0.863
Gorai.012G161900 Gossypium raimondii Gorai.012G161900 I 0.860
Si011709m.g Setaria italica Si011709m.g I 0.855
Lus10011578.g Linum usitatissimum Lus10011578.g I 0.849
Lus10019247.g Linum usitatissimum Lus10019247.g I 0.849
MTR_4g097940 Medicago truncatula MTR_4g097940 I 0.845
GLYMA05G23291 Glycine max GLYMA05G23291 I 0.843
GLYMA17G16741 Glycine max GLYMA17G16741 I 0.843
GRMZM2G036554 Zea mays GRMZM2G036554 I 0.842
Si024086m.g Setaria italica Si024086m.g I 0.842
Pavir.J26871 Panicum virgatum Pavir.J26871 I 0.842
F775_16881 Aegilops tauschii F775_16881 N 0.841