Carubv10023903m.g (Capsella rubella)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Carubv10023903m.g T049438_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10023903m bHLH 68 116

Links

Other bHLH family TFs
Other Capsella rubella TFs

71 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BHLH106 Arabidopsis thaliana AT2G41130 N 0.914
Bo3g035410 Brassica oleracea Bo3g035410 N 0.914
Bo4g012960 Brassica oleracea Bo4g012960 N 0.914
Bo4g190700 Brassica oleracea Bo4g190700 N 0.914
Bra004599 Brassica rapa Bra004599 N 0.914
Bra016951 Brassica rapa Bra016951 N 0.914
Bostr.9345s0019 Boechera stricta Bostr.9345s0019 N 0.914
Cagra.0578s0007 Capsella grandiflora Cagra.0578s0007 N 0.914
Cagra.1642s0077 Capsella grandiflora Cagra.1642s0077 N 0.914
Carubv10017947m.g Capsella rubella Carubv10017947m.g N 0.914
SapurV1A.0189s0140 Salix purpurea SapurV1A.0189s0140 N 0.914
Thhalv10006410m.g Eutrema salsugineum Thhalv10006410m.g N 0.914
Thhalv10017546m.g Eutrema salsugineum Thhalv10017546m.g N 0.914
Bo4g112750 Brassica oleracea Bo4g112750 N 0.911
Bra014672 Brassica rapa Bra014672 N 0.911
Traes_5BL_CBFAD4B59 Triticum aestivum Traes_5BL_CBFAD4B59 N 0.901
scaffold_402920.1 Arabidopsis lyrata scaffold_402920.1 N 0.890
GLYMA02G23590 Glycine max GLYMA02G23590 N 0.888
GLYMA03G28150 Glycine max GLYMA03G28150 N 0.888
GLYMA19G30910 Glycine max GLYMA19G30910 N 0.888
GSMUA_Achr8G23980_001 Musa acuminata GSMUA_Achr8G23980_001 N 0.888
POPTR_0006s03550 Populus trichocarpa POPTR_0006s03550 N 0.888
POPTR_0016s03460 Populus trichocarpa POPTR_0016s03460 N 0.888
PRUPE_ppa011532mg Prunus persica PRUPE_ppa011532mg N 0.888
TCM_024016 Theobroma cacao TCM_024016 N 0.888
Ca_07159 Cicer arietinum Ca_07159 N 0.888
Cla017413 Citrullus lanatus Cla017413 N 0.888
Pm025589 Prunus mume Pm025589 N 0.888
30180.m001071 Ricinus communis 30180.m001071 N 0.888
cassava7163.valid.m1 Manihot esculenta cassava7163.valid.m1 N 0.888
Cucsa.340200 Cucumis sativus Cucsa.340200 N 0.888
Bostr.20505s0075 Boechera stricta Bostr.20505s0075 N 0.888
evm.TU.supercontig_92.83 Carica papaya evm.TU.supercontig_92.83 N 0.888
gene14814-v1.0-hybrid Fragaria vesca gene14814-v1.0-hybrid N 0.888
Gorai.007G352300 Gossypium raimondii Gorai.007G352300 N 0.888
Lus10018020.g Linum usitatissimum Lus10018020.g N 0.888
MDP0000138102 Malus domestica MDP0000138102 N 0.888
MDP0000213892 Malus domestica MDP0000213892 N 0.888
SapurV1A.0159s0020 Salix purpurea SapurV1A.0159s0020 N 0.888
PK23387.1 Cannabis sativa PK23387.1 N 0.888
chr1.CM0816.330.nc Lotus japonicus chr1.CM0816.330.nc N 0.888
Cla019977 Citrullus lanatus Cla019977 I 0.878
Cucsa.213230 Cucumis sativus Cucsa.213230 I 0.878
Eucgr.E02743 Eucalyptus grandis Eucgr.E02743 I 0.878
VIT_08s0040g01240 Vitis vinifera VIT_08s0040g01240 I 0.876
Aquca_004_00748 Aquilegia coerulea Aquca_004_00748 I 0.876
BRADI1G04280 Brachypodium distachyon BRADI1G04280 N 0.875
GRMZM2G027068 Zea mays GRMZM2G027068 N 0.875
ORGLA03G0352000 Oryza glaberrima ORGLA03G0352000 N 0.875
OS03G0811400 Oryza sativa OS03G0811400 N 0.875
PGSC0003DMG400008378 Solanum tuberosum PGSC0003DMG400008378 N 0.875
Sb01g003830 Sorghum bicolor Sb01g003830 N 0.875
Solyc10g078380.1 Solanum lycopersicum Solyc10g078380.1 N 0.875
Pavir.J02699 Panicum virgatum Pavir.J02699 N 0.875
Pavir.J24868 Panicum virgatum Pavir.J24868 N 0.875
Eucgr.A02230 Eucalyptus grandis Eucgr.A02230 N 0.869
SapurV1A.1185s0010 Salix purpurea SapurV1A.1185s0010 I 0.866
SapurV1A.1821s0030 Salix purpurea SapurV1A.1821s0030 I 0.866
Lus10042017.g Linum usitatissimum Lus10042017.g N 0.864
fgenesh2_kg.5__2108__AT3G56770.1 Arabidopsis lyrata fgenesh2_kg.5__2108__AT3G56770.1 N 0.859
Ciclev10012626m.g Citrus clementina Ciclev10012626m.g N 0.853
orange1.1g026479m.g Citrus sinensis orange1.1g026479m.g N 0.853
mgf009382m Mimulus guttatus mgf009382m N 0.852
TCM_029711 Theobroma cacao TCM_029711 I 0.848
Gorai.009G163400 Gossypium raimondii Gorai.009G163400 I 0.848
VIT_14s0068g01580 Vitis vinifera VIT_14s0068g01580 I 0.846
cassava18812.valid.m1 Manihot esculenta cassava18812.valid.m1 I 0.846
cassava32077.m1 Manihot esculenta cassava32077.m1 I 0.846
MDP0000249969 Malus domestica MDP0000249969 I 0.846
BRADI2G07050 Brachypodium distachyon BRADI2G07050 N 0.840
Aquca_081_00012 Aquilegia coerulea Aquca_081_00012 I 0.840