Ciclev10007937m.g (Citrus clementina)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Ciclev10007937m.g T049487_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK15505.1
M01125_2.00 		Cannabis sativa
NRCACGTGYN
NRCACGTGYN		 PBM
Lambert et al.(2019)
pTH10268 		0.882 0.837
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10007937m bHLH 362 410

Links

Other bHLH family TFs
Other Citrus clementina TFs

53 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GSMUA_Achr6G00900_001 Musa acuminata GSMUA_Achr6G00900_001 I 0.914
orange1.1g008967m.g Citrus sinensis orange1.1g008967m.g I 0.914
VIT_11s0016g02070 Vitis vinifera VIT_11s0016g02070 I 0.893
Cla017100 Citrullus lanatus Cla017100 I 0.893
Cucsa.117060 Cucumis sativus Cucsa.117060 I 0.893
Eucgr.C03476 Eucalyptus grandis Eucgr.C03476 I 0.893
MDP0000782908 Malus domestica MDP0000782908 I 0.893
POPTR_0006s15310 Populus trichocarpa POPTR_0006s15310 I 0.892
29912.m005337 Ricinus communis 29912.m005337 I 0.892
cassava46879.m1 Manihot esculenta cassava46879.m1 I 0.892
MDP0000119495 Malus domestica MDP0000119495 I 0.892
MDP0000252899 Malus domestica MDP0000252899 I 0.892
OPUNC05G05910 Oryza punctata OPUNC05G05910 I 0.882
PK15505.1 Cannabis sativa PK15505.1 D 0.882
Aquca_020_00438 Aquilegia coerulea Aquca_020_00438 I 0.879
PGSC0003DMG400000335 Solanum tuberosum PGSC0003DMG400000335 I 0.878
Si024546m.g Setaria italica Si024546m.g I 0.873
Pavir.Ca00825 Panicum virgatum Pavir.Ca00825 I 0.873
Pavir.J01638 Panicum virgatum Pavir.J01638 I 0.873
Al_scaffold_0008_2143 Arabidopsis lyrata Al_scaffold_0008_2143 I 0.869
AT5G56960 Arabidopsis thaliana AT5G56960 I 0.869
Bra035639 Brassica rapa Bra035639 I 0.869
PRUPE_ppa020972mg Prunus persica PRUPE_ppa020972mg I 0.869
Pm027191 Prunus mume Pm027191 I 0.869
mgf018190m Mimulus guttatus mgf018190m I 0.869
Bostr.26833s0565 Boechera stricta Bostr.26833s0565 I 0.869
Cagra.1569s0004 Capsella grandiflora Cagra.1569s0004 I 0.869
Carubv10026331m.g Capsella rubella Carubv10026331m.g I 0.869
gene12658-v1.0-hybrid Fragaria vesca gene12658-v1.0-hybrid I 0.869
Thhalv10013360m.g Eutrema salsugineum Thhalv10013360m.g I 0.869
cassava25701.m1 Manihot esculenta cassava25701.m1 I 0.865
SapurV1A.0108s0270 Salix purpurea SapurV1A.0108s0270 I 0.862
BGIOSGA033976 Oryza indica BGIOSGA033976 I 0.861
LPERR05G05410 Leersia perrieri LPERR05G05410 I 0.861
OB05G15870 Oryza brachyantha OB05G15870 I 0.861
OBART05G06380 Oryza barthii OBART05G06380 I 0.861
OGLUM05G06690 Oryza glumaepatula OGLUM05G06690 I 0.861
ONIVA05G07120 Oryza nivara ONIVA05G07120 I 0.861
ORGLA05G0058200 Oryza glaberrima ORGLA05G0058200 I 0.861
ORUFI05G06870 Oryza rufipogon ORUFI05G06870 I 0.861
OS05G0199800 Oryza sativa OS05G0199800 I 0.861
PGSC0003DMG400022043 Solanum tuberosum PGSC0003DMG400022043 I 0.861
Solyc07g039570.2 Solanum lycopersicum Solyc07g039570.2 I 0.861
AMTR_s00064p00208400 Amborella trichopoda AMTR_s00064p00208400 I 0.860
GSMUA_Achr7G09080_001 Musa acuminata GSMUA_Achr7G09080_001 N 0.860
PDK_20s1427741g002 Phoenix dactylifera PDK_20s1427741g002 I 0.860
Bo2g032920 Brassica oleracea Bo2g032920 I 0.858
GLYMA09G07391 Glycine max GLYMA09G07391 I 0.854
GLYMA15G18580 Glycine max GLYMA15G18580 I 0.854
LjT02N03.60.nd Lotus japonicus LjT02N03.60.nd I 0.854
Gorai.001G012400 Gossypium raimondii Gorai.001G012400 I 0.850
GRMZM2G175480 Zea mays GRMZM2G175480 N 0.849
TCM_037645 Theobroma cacao TCM_037645 I 0.839