Ciclev10020681m.g (Citrus clementina)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Ciclev10020681m.g T049532_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT2G42280
M06733_2.00 		Arabidopsis thaliana
DNCMACTTGYH
DRCAAGTKGNH		 Dap-seq
OMalley et al.(2016)
bHLH130_col_a 		0.866 0.784
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10020681m bHLH 300 350

Links

Other bHLH family TFs
Other Citrus clementina TFs

74 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
orange1.1g038558m.g Citrus sinensis orange1.1g038558m.g I 0.914
PDK_20s1546591g001 Phoenix dactylifera PDK_20s1546591g001 I 0.911
BHLH128 Arabidopsis thaliana AT1G05805 I 0.894
BGIOSGA016651 Oryza indica BGIOSGA016651 I 0.894
BRADI3G48070 Brachypodium distachyon BRADI3G48070 I 0.894
F775_26506 Aegilops tauschii F775_26506 I 0.894
fgenesh2_kg.1__542__AT1G05805.1 Arabidopsis lyrata fgenesh2_kg.1__542__AT1G05805.1 I 0.894
LPERR04G13560 Leersia perrieri LPERR04G13560 I 0.894
MLOC_12058 Hordeum vulgare MLOC_12058 I 0.894
MTR_1g116790 Medicago truncatula MTR_1g116790 I 0.894
OB04G24170 Oryza brachyantha OB04G24170 I 0.894
OBART04G16900 Oryza barthii OBART04G16900 I 0.894
OGLUM04G16920 Oryza glumaepatula OGLUM04G16920 I 0.894
OMERI04G14260 Oryza meridionalis OMERI04G14260 I 0.894
ONIVA04G15000 Oryza nivara ONIVA04G15000 I 0.894
OPUNC04G14700 Oryza punctata OPUNC04G14700 I 0.894
ORGLA04G0140000 Oryza glaberrima ORGLA04G0140000 I 0.894
ORUFI04G18350 Oryza rufipogon ORUFI04G18350 I 0.894
OS04G0489600 Oryza sativa OS04G0489600 I 0.894
Traes_6AL_9437F730F Triticum aestivum Traes_6AL_9437F730F I 0.894
Traes_6BL_868408DFC Triticum aestivum Traes_6BL_868408DFC I 0.894
Traes_6DL_62A15AED6 Triticum aestivum Traes_6DL_62A15AED6 I 0.894
TRIUR3_16394 Triticum urartu TRIUR3_16394 I 0.894
Ca_14007 Cicer arietinum Ca_14007 I 0.894
Cucsa.094340 Cucumis sativus Cucsa.094340 I 0.894
Bostr.25219s0385 Boechera stricta Bostr.25219s0385 I 0.894
Cagra.1671s0210 Capsella grandiflora Cagra.1671s0210 I 0.894
Carubv10009382m.g Capsella rubella Carubv10009382m.g I 0.894
Thhalv10008050m.g Eutrema salsugineum Thhalv10008050m.g I 0.894
Bo5g006980 Brassica oleracea Bo5g006980 I 0.891
Bo5g007030 Brassica oleracea Bo5g007030 I 0.891
Bra015456 Brassica rapa Bra015456 I 0.891
Eucgr.A00213 Eucalyptus grandis Eucgr.A00213 I 0.891
Lus10025518.g Linum usitatissimum Lus10025518.g I 0.891
Lus10026733.g Linum usitatissimum Lus10026733.g I 0.891
GSMUA_Achr1G27710_001 Musa acuminata GSMUA_Achr1G27710_001 I 0.879
GSMUA_Achr8G01370_001 Musa acuminata GSMUA_Achr8G01370_001 I 0.879
GSMUA_Achr8G32130_001 Musa acuminata GSMUA_Achr8G32130_001 I 0.879
Ca_07284 Cicer arietinum Ca_07284 I 0.879
AT2G42280 Arabidopsis thaliana AT2G42280 D 0.866
LPERR08G16800 Leersia perrieri LPERR08G16800 I 0.866
LPERR09G10800 Leersia perrieri LPERR09G10800 I 0.866
POPTR_0003s22290 Populus trichocarpa POPTR_0003s22290 I 0.866
scaffold_403077.1 Arabidopsis lyrata scaffold_403077.1 I 0.866
VIT_06s0004g01740 Vitis vinifera VIT_06s0004g01740 I 0.866
30169.m006403 Ricinus communis 30169.m006403 I 0.866
Cagra.2636s0012 Capsella grandiflora Cagra.2636s0012 I 0.866
Carubv10023498m.g Capsella rubella Carubv10023498m.g I 0.866
MDP0000307685 Malus domestica MDP0000307685 I 0.866
SapurV1A.0009s0400 Salix purpurea SapurV1A.0009s0400 I 0.866
BGIOSGA004992 Oryza indica BGIOSGA004992 I 0.857
BRADI2G57800 Brachypodium distachyon BRADI2G57800 I 0.857
F775_24576 Aegilops tauschii F775_24576 I 0.857
LPERR01G35240 Leersia perrieri LPERR01G35240 I 0.857
MLOC_20318 Hordeum vulgare MLOC_20318 I 0.857
OB01G49420 Oryza brachyantha OB01G49420 I 0.857
OBART01G40680 Oryza barthii OBART01G40680 I 0.857
OGLUM01G44860 Oryza glumaepatula OGLUM01G44860 I 0.857
OLONG_004619 Oryza longistaminata OLONG_004619 I 0.857
OMERI01G37660 Oryza meridionalis OMERI01G37660 I 0.857
ONIVA01G45730 Oryza nivara ONIVA01G45730 I 0.857
OPUNC01G39450 Oryza punctata OPUNC01G39450 I 0.857
ORGLA01G0346300 Oryza glaberrima ORGLA01G0346300 I 0.857
ORUFI01G44010 Oryza rufipogon ORUFI01G44010 I 0.857
OS01G0900800 Oryza sativa OS01G0900800 I 0.857
Traes_3AL_B68C491B0 Triticum aestivum Traes_3AL_B68C491B0 I 0.857
TRAES3BF135900010CFD_g Triticum aestivum TRAES3BF135900010CFD_g I 0.857
TRIUR3_33816 Triticum urartu TRIUR3_33816 I 0.857
GRMZM2G114873 Zea mays GRMZM2G114873 I 0.854
Sb03g042860 Sorghum bicolor Sb03g042860 I 0.854
Si001123m.g Setaria italica Si001123m.g I 0.854
Pavir.J01306 Panicum virgatum Pavir.J01306 I 0.854
Bostr.25993s0551 Boechera stricta Bostr.25993s0551 I 0.845
MTR_7g092540 Medicago truncatula MTR_7g092540 I 0.840