Eucgr.I02069 (Eucalyptus grandis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Eucgr.I02069 T049689_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BIM2
M01701_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8089 		0.884 0.804
BIM2
M06727_2.00 		Arabidopsis thaliana
CACGTGHBNNNNNNNNNNN
NNNNNNNNNNNVDCACGTG		 Dap-seq
OMalley et al.(2016)
BIM2_colamp 		0.884 0.804
BIM2
M06728_2.00 		Arabidopsis thaliana
CACGTGMBNNNCVYV
BRBGNNNVKCACGTG		 Dap-seq
OMalley et al.(2016)
BIM2_col_v3b 		0.884 0.804
BIM1
M01710_2.00 		Arabidopsis thaliana
NCRCGTGNNN
NNNCACGYGN		 PBM
Weirauch et al.(2014)
pTH8114 		0.864 0.882
BIM1
M06739_2.00 		Arabidopsis thaliana
CACGTGAYNHNNNH
DNNNDNRTCACGTG		 Dap-seq
OMalley et al.(2016)
BIM1_col_a 		0.864 0.882
BIM1
M06740_2.00 		Arabidopsis thaliana
NVKCACGTGMYHHNHNHNHNNN
NNNDNDNDNDDRKCACGTGMBN		 Dap-seq
OMalley et al.(2016)
BIM1_colamp_a 		0.864 0.882
BIM1
M09787_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$BIM1_01 		0.864 0.882
fgenesh1_pg.scaffold_37000071
M01757_2.00 		Physcomitrella patens
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8584 		0.861 0.863
BIM3
M01711_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8591 		0.861 0.902
BIM3
M06741_2.00 		Arabidopsis thaliana
DYGTSHNNVKCACGTGMY
RKCACGTGMBNNDSACRH		 Dap-seq
OMalley et al.(2016)
BIM3_col_a 		0.861 0.902
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.I02069.1 bHLH 173 223
Eucgr.I02069.2 bHLH 173 223

Links

Other bHLH family TFs
Other Eucalyptus grandis TFs

164 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA08G28010 Glycine max GLYMA08G28010 I 0.914
GLYMA18G51080 Glycine max GLYMA18G51080 I 0.914
MTR_5g048350 Medicago truncatula MTR_5g048350 I 0.914
POPTR_0004s11180 Populus trichocarpa POPTR_0004s11180 I 0.914
TCM_019015 Theobroma cacao TCM_019015 I 0.914
BIM3 Vitis vinifera VIT_14s0083g00930 I 0.914
Ca_22043 Cicer arietinum Ca_22043 I 0.914
29790.m000843 Ricinus communis 29790.m000843 I 0.914
cassava14.valid.m1 Manihot esculenta cassava14.valid.m1 I 0.914
cassava15.valid.m1 Manihot esculenta cassava15.valid.m1 I 0.914
Cucsa.174600 Cucumis sativus Cucsa.174600 I 0.914
Gorai.001G197500 Gossypium raimondii Gorai.001G197500 I 0.914
Lus10004630.g Linum usitatissimum Lus10004630.g I 0.914
Lus10026684.g Linum usitatissimum Lus10026684.g I 0.914
SapurV1A.0274s0040 Salix purpurea SapurV1A.0274s0040 I 0.914
SapurV1A.2517s0020 Salix purpurea SapurV1A.2517s0020 I 0.914
Thhalv10027863m.g Eutrema salsugineum Thhalv10027863m.g I 0.914
PK00238.1 Cannabis sativa PK00238.1 I 0.914
POPTR_0017s13610 Populus trichocarpa POPTR_0017s13610 I 0.912
Aquca_002_00952 Aquilegia coerulea Aquca_002_00952 I 0.894
Sb07g028860 Sorghum bicolor Sb07g028860 I 0.892
Si013622m.g Setaria italica Si013622m.g I 0.892
Pavir.Fb01833 Panicum virgatum Pavir.Fb01833 I 0.892
Pavir.J38910 Panicum virgatum Pavir.J38910 I 0.892
Ciclev10012135m.g Citrus clementina Ciclev10012135m.g I 0.890
Lus10034358.g Linum usitatissimum Lus10034358.g I 0.890
orange1.1g019485m.g Citrus sinensis orange1.1g019485m.g I 0.890
BIM2 Arabidopsis thaliana AT1G69010 D 0.884
Bo2g062560 Brassica oleracea Bo2g062560 I 0.884
Bo6g108530 Brassica oleracea Bo6g108530 I 0.884
Bra004355 Brassica rapa Bra004355 I 0.884
Bra038332 Brassica rapa Bra038332 I 0.884
BIM2 Arabidopsis lyrata fgenesh2_kg.2__1159__AT1G69010.1 I 0.884
GLYMA02G13670 Glycine max GLYMA02G13670 I 0.884
MTR_7g017320 Medicago truncatula MTR_7g017320 I 0.884
PGSC0003DMG400001919 Solanum tuberosum PGSC0003DMG400001919 I 0.884
PGSC0003DMG400019654 Solanum tuberosum PGSC0003DMG400019654 I 0.884
POPTR_0008s11120 Populus trichocarpa POPTR_0008s11120 I 0.884
POPTR_0010s14740 Populus trichocarpa POPTR_0010s14740 I 0.884
PRUPE_ppa008387mg Prunus persica PRUPE_ppa008387mg I 0.884
PRUPE_ppa008856mg Prunus persica PRUPE_ppa008856mg I 0.884
Solyc04g005280.2 Solanum lycopersicum Solyc04g005280.2 I 0.884
Solyc05g011810.2 Solanum lycopersicum Solyc05g011810.2 I 0.884
TCM_011433 Theobroma cacao TCM_011433 I 0.884
BIM2 Vitis vinifera VIT_01s0010g00540 I 0.884
Cla022382 Citrullus lanatus Cla022382 I 0.884
30138.m003899 Ricinus communis 30138.m003899 I 0.884
cassava29314.valid.m1 Manihot esculenta cassava29314.valid.m1 I 0.884
cassava43370.valid.m1 Manihot esculenta cassava43370.valid.m1 I 0.884
Cucsa.328060 Cucumis sativus Cucsa.328060 I 0.884
mgf011829m Mimulus guttatus mgf011829m I 0.884
mgf013208m Mimulus guttatus mgf013208m I 0.884
Bostr.10273s0468 Boechera stricta Bostr.10273s0468 I 0.884
Cagra.1157s0023 Capsella grandiflora Cagra.1157s0023 I 0.884
Carubv10020679m.g Capsella rubella Carubv10020679m.g I 0.884
Ciclev10032020m.g Citrus clementina Ciclev10032020m.g I 0.884
Eucgr.B03113 Eucalyptus grandis Eucgr.B03113 I 0.884
gene04534-v1.0-hybrid Fragaria vesca gene04534-v1.0-hybrid I 0.884
Gorai.009G327300 Gossypium raimondii Gorai.009G327300 I 0.884
Gorai.013G098000 Gossypium raimondii Gorai.013G098000 I 0.884
MDP0000261293 Malus domestica MDP0000261293 I 0.884
orange1.1g019960m.g Citrus sinensis orange1.1g019960m.g I 0.884
SapurV1A.0084s0570 Salix purpurea SapurV1A.0084s0570 I 0.884
Thhalv10018889m.g Eutrema salsugineum Thhalv10018889m.g I 0.884
SapurV1A.0060s0510 Salix purpurea SapurV1A.0060s0510 I 0.882
PK01364.1 Cannabis sativa PK01364.1 I 0.882
GLYMA01G09010 Glycine max GLYMA01G09010 I 0.873
evm.TU.supercontig_289.6 Carica papaya evm.TU.supercontig_289.6 I 0.871
BIM1 Arabidopsis thaliana AT5G08130 D 0.864
Bo2g161110 Brassica oleracea Bo2g161110 I 0.864
Bo3g004690 Brassica oleracea Bo3g004690 I 0.864
Bo5g020460 Brassica oleracea Bo5g020460 I 0.864
Bo9g174770 Brassica oleracea Bo9g174770 I 0.864
Bra009322 Brassica rapa Bra009322 I 0.864
Bra029354 Brassica rapa Bra029354 I 0.864
GLYMA05G07490 Glycine max GLYMA05G07490 I 0.864
MTR_4g110040 Medicago truncatula MTR_4g110040 I 0.864
POPTR_0015s03550 Populus trichocarpa POPTR_0015s03550 I 0.864
PRUPE_ppa003436mg Prunus persica PRUPE_ppa003436mg I 0.864
BIM1 Arabidopsis lyrata scaffold_600819.1 I 0.864
Solyc03g114720.2 Solanum lycopersicum Solyc03g114720.2 I 0.864
Solyc06g069370.2 Solanum lycopersicum Solyc06g069370.2 I 0.864
TCM_014392 Theobroma cacao TCM_014392 I 0.864
BIM1 Vitis vinifera VIT_17s0000g04790 I 0.864
cassava29318.valid.m1 Manihot esculenta cassava29318.valid.m1 I 0.864
cassava43379.valid.m1 Manihot esculenta cassava43379.valid.m1 I 0.864
Cucsa.113490 Cucumis sativus Cucsa.113490 I 0.864
mgf001137m Mimulus guttatus mgf001137m I 0.864
mgf005849m Mimulus guttatus mgf005849m I 0.864
Bostr.13129s0152 Boechera stricta Bostr.13129s0152 I 0.864
Cagra.1365s0019 Capsella grandiflora Cagra.1365s0019 I 0.864
Carubv10000655m.g Capsella rubella Carubv10000655m.g I 0.864
Ciclev10020248m.g Citrus clementina Ciclev10020248m.g I 0.864
Eucgr.B00645 Eucalyptus grandis Eucgr.B00645 I 0.864
evm.TU.supercontig_3.225 Carica papaya evm.TU.supercontig_3.225 I 0.864
Gorai.007G040600 Gossypium raimondii Gorai.007G040600 I 0.864
orange1.1g038451m.g Citrus sinensis orange1.1g038451m.g I 0.864
SapurV1A.0178s0150 Salix purpurea SapurV1A.0178s0150 I 0.864
SapurV1A.0868s0010 Salix purpurea SapurV1A.0868s0010 I 0.864
Thhalv10013181m.g Eutrema salsugineum Thhalv10013181m.g I 0.864
PK10562.1 Cannabis sativa PK10562.1 I 0.864
AMTR_s00006p00250310 Amborella trichopoda AMTR_s00006p00250310 I 0.861
BIM3 Arabidopsis thaliana AT5G38860 D 0.861
BGIOSGA028888 Oryza indica BGIOSGA028888 I 0.861
Bra005969 Brassica rapa Bra005969 I 0.861
BRADI3G38970 Brachypodium distachyon BRADI3G38970 I 0.861
OB08G25940 Oryza brachyantha OB08G25940 I 0.861
OGLUM08G19830 Oryza glumaepatula OGLUM08G19830 I 0.861
OLONG_003583 Oryza longistaminata OLONG_003583 I 0.861
ONIVA08G20800 Oryza nivara ONIVA08G20800 I 0.861
OPUNC08G16820 Oryza punctata OPUNC08G16820 I 0.861
ORGLA08G0164200 Oryza glaberrima ORGLA08G0164200 I 0.861
ORUFI08G21030 Oryza rufipogon ORUFI08G21030 I 0.861
OS08G0490000 Oryza sativa OS08G0490000 I 0.861
BIM3 Arabidopsis lyrata scaffold_704174.1 I 0.861
SELMODRAFT_451475 Selaginella moellendorffii SELMODRAFT_451475 I 0.861
SELMODRAFT_451477 Selaginella moellendorffii SELMODRAFT_451477 I 0.861
Traes_7DL_04FC0BF21 Triticum aestivum Traes_7DL_04FC0BF21 N 0.861
estExt_fgenesh1_pg.C_2110039 Physcomitrella patens estExt_fgenesh1_pg.C_2110039 I 0.861
fgenesh1_pg.scaffold_37000071 Physcomitrella patens fgenesh1_pg.scaffold_37000071 D 0.861
gw1.90.123.1 Physcomitrella patens gw1.90.123.1 I 0.861
Cagra.2539s0002 Capsella grandiflora Cagra.2539s0002 I 0.861
Carubv10006445m.g Capsella rubella Carubv10006445m.g I 0.861
Aquca_006_00387 Aquilegia coerulea Aquca_006_00387 I 0.858
ALC Arabidopsis thaliana AT5G67110 I 0.856
BGIOSGA022375 Oryza indica BGIOSGA022375 I 0.856
Bra012133 Brassica rapa Bra012133 I 0.856
ALC Arabidopsis lyrata fgenesh2_kg.8__2705__AT5G67110.1 I 0.856
GRMZM2G017349 Zea mays GRMZM2G017349 I 0.856
LPERR06G03910 Leersia perrieri LPERR06G03910 I 0.856
MTR_1g019240 Medicago truncatula MTR_1g019240 I 0.856
OBART06G04330 Oryza barthii OBART06G04330 I 0.856
OGLUM06G04430 Oryza glumaepatula OGLUM06G04430 I 0.856
OMERI06G05430 Oryza meridionalis OMERI06G05430 I 0.856
ONIVA06G05510 Oryza nivara ONIVA06G05510 I 0.856
ORGLA06G0039900 Oryza glaberrima ORGLA06G0039900 I 0.856
ORUFI06G04330 Oryza rufipogon ORUFI06G04330 I 0.856
PGSC0003DMG401007955 Solanum tuberosum PGSC0003DMG401007955 I 0.856
Sb10g004500 Sorghum bicolor Sb10g004500 I 0.856
Ca_19269 Cicer arietinum Ca_19269 I 0.856
Bostr.0568s0133 Boechera stricta Bostr.0568s0133 I 0.856
Carubv10028570m.g Capsella rubella Carubv10028570m.g I 0.856
gene09125-v1.0-hybrid Fragaria vesca gene09125-v1.0-hybrid I 0.856
Pavir.J15575 Panicum virgatum Pavir.J15575 I 0.856
Pavir.J38250 Panicum virgatum Pavir.J38250 I 0.856
Thhalv10004889m.g Eutrema salsugineum Thhalv10004889m.g I 0.856
GLYMA17G08980 Glycine max GLYMA17G08980 I 0.852
Cla018818 Citrullus lanatus Cla018818 I 0.852
Cucsa.198520 Cucumis sativus Cucsa.198520 I 0.852
GSMUA_Achr9G28050_001 Musa acuminata GSMUA_Achr9G28050_001 I 0.851
POPTR_0012s06650 Populus trichocarpa POPTR_0012s06650 I 0.851
Gorai.006G269200 Gossypium raimondii Gorai.006G269200 I 0.851
GRMZM2G172795 Zea mays GRMZM2G172795 I 0.841
LPERR04G17400 Leersia perrieri LPERR04G17400 I 0.841
Sb06g025040 Sorghum bicolor Sb06g025040 I 0.841
Sb06g025060 Sorghum bicolor Sb06g025060 I 0.841
Si000845m.g Setaria italica Si000845m.g I 0.841
Si012401m.g Setaria italica Si012401m.g I 0.841
GSMUA_Achr2G05450_001 Musa acuminata GSMUA_Achr2G05450_001 I 0.840
GSMUA_Achr4G19530_001 Musa acuminata GSMUA_Achr4G19530_001 I 0.840
GSMUA_Achr9G19110_001 Musa acuminata GSMUA_Achr9G19110_001 I 0.840
30138.m003913 Ricinus communis 30138.m003913 I 0.840
gene26139-v1.0-hybrid Fragaria vesca gene26139-v1.0-hybrid I 0.840