CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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evm.TU.supercontig_489.5
(
Carica papaya
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
evm.TU.supercontig_489.5
T049771_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_489.5
bHLH
157
204
SAQSIAARERRRKITEKTQKLAKLIPGGHKMNTAEMFQAASKYVKYLQ
Links
Other
bHLH
family TFs
Other
Carica papaya
TFs
58 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
27996.m000153
Ricinus communis
27996.m000153
N
0.890
Al_scaffold_0004_1965
Arabidopsis lyrata
Al_scaffold_0004_1965
N
0.855
AMTR_s00011p00235740
Amborella trichopoda
AMTR_s00011p00235740
N
0.856
Aquca_003_00697
Aquilegia coerulea
Aquca_003_00697
N
0.838
Aquca_020_00213
Aquilegia coerulea
Aquca_020_00213
N
0.838
BHLH52
Arabidopsis thaliana
AT1G30670
N
0.855
BHLH53
Arabidopsis thaliana
AT2G34820
N
0.855
Bo3g028090
Brassica oleracea
Bo3g028090
N
0.855
Bo4g039270
Brassica oleracea
Bo4g039270
N
0.855
Bostr.15697s0367
Boechera stricta
Bostr.15697s0367
N
0.843
Bostr.23794s0621
Boechera stricta
Bostr.23794s0621
N
0.855
Bra005389
Brassica rapa
Bra005389
N
0.855
Bra022993
Brassica rapa
Bra022993
N
0.853
Cagra.1508s0136
Capsella grandiflora
Cagra.1508s0136
N
0.855
Carubv10011063m.g
Capsella rubella
Carubv10011063m.g
N
0.855
cassava27522.m1
Manihot esculenta
cassava27522.m1
N
0.914
cassava8426.m1
Manihot esculenta
cassava8426.m1
N
0.877
Ca_13608
Cicer arietinum
Ca_13608
N
0.912
Ca_13610
Cicer arietinum
Ca_13610
N
0.912
Ciclev10017579m.g
Citrus clementina
Ciclev10017579m.g
N
0.866
Cla020055
Citrullus lanatus
Cla020055
N
0.859
Cucsa.167440
Cucumis sativus
Cucsa.167440
N
0.859
Eucgr.D01630
Eucalyptus grandis
Eucgr.D01630
N
0.901
evm.TU.supercontig_489.6
Carica papaya
evm.TU.supercontig_489.6
N
0.914
fgenesh1_pm.C_scaffold_1002485
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_1002485
N
0.855
gene18542-v1.0-hybrid
Fragaria vesca
gene18542-v1.0-hybrid
N
0.901
GLYMA08G17747
Glycine max
GLYMA08G17747
N
0.880
GLYMA15G41400
Glycine max
GLYMA15G41400
N
0.903
Gorai.002G107000
Gossypium raimondii
Gorai.002G107000
N
0.859
Gorai.005G218900
Gossypium raimondii
Gorai.005G218900
N
0.880
GSMUA_Achr11G16900_001
Musa acuminata
GSMUA_Achr11G16900_001
N
0.844
GSMUA_AchrUn_randomG20690_001
Musa acuminata
GSMUA_AchrUn_randomG20690_001
N
0.844
Lus10005451.g
Linum usitatissimum
Lus10005451.g
N
0.841
Lus10038432.g
Linum usitatissimum
Lus10038432.g
N
0.847
MDP0000209483
Malus domestica
MDP0000209483
N
0.901
MDP0000216053
Malus domestica
MDP0000216053
N
0.879
MDP0000280921
Malus domestica
MDP0000280921
N
0.901
mgf020354m
Mimulus guttatus
mgf020354m
N
0.879
MTR_1g060700
Medicago truncatula
MTR_1g060700
N
0.901
MTR_2g067000
Medicago truncatula
MTR_2g067000
N
0.901
orange1.1g041370m.g
Citrus sinensis
orange1.1g041370m.g
N
0.866
PGSC0003DMG400020812
Solanum tuberosum
PGSC0003DMG400020812
N
0.846
PGSC0003DMG400044874
Solanum tuberosum
PGSC0003DMG400044874
N
0.846
Pm010610
Prunus mume
Pm010610
N
0.868
POPTR_0001s46530
Populus trichocarpa
POPTR_0001s46530
N
0.914
POPTR_0011s16100
Populus trichocarpa
POPTR_0011s16100
N
0.914
PRUPE_ppa017597mg
Prunus persica
PRUPE_ppa017597mg
N
0.868
PRUPE_ppa025945mg
Prunus persica
PRUPE_ppa025945mg
N
0.877
SapurV1A.0527s0040
Salix purpurea
SapurV1A.0527s0040
N
0.914
SapurV1A.0602s0120
Salix purpurea
SapurV1A.0602s0120
N
0.912
Si038598m.g
Setaria italica
Si038598m.g
N
0.844
Solyc08g075090.2
Solanum lycopersicum
Solyc08g075090.2
N
0.846
Solyc08g075110.1
Solanum lycopersicum
Solyc08g075110.1
N
0.846
TCM_027032
Theobroma cacao
TCM_027032
N
0.870
TCM_033386
Theobroma cacao
TCM_033386
N
0.901
Thhalv10009765m.g
Eutrema salsugineum
Thhalv10009765m.g
N
0.890
Thhalv10017751m.g
Eutrema salsugineum
Thhalv10017751m.g
N
0.855
VIT_10s0092g00030
Vitis vinifera
VIT_10s0092g00030
N
0.903