Gorai.001G103300 (Gossypium raimondii)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Gorai.001G103300 T049923_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BHLH78
M01713_2.00 		Arabidopsis thaliana
GCACGTGC
GCACGTGC		 PBM
Weirauch et al.(2014)
pTH7666 		0.914 0.961
BPE
M01700_2.00 		Arabidopsis thaliana
NCACGTNNN
NNNACGTGN		 PBM
Weirauch et al.(2014)
pTH7290 		0.901 0.882
BPE
M06726_2.00 		Arabidopsis thaliana
NNNNNNNNCACGTGNNNNNWB
VWNNNNNCACGTGNNNNNNNN		 Dap-seq
OMalley et al.(2016)
bHLH31_col 		0.901 0.882
BHLH49
M01052_2.00 		Arabidopsis thaliana
NNCACGTGCN
NGCACGTGNN		 PBM
Sullivan et al.(2014)
pTH7309 		0.888 0.922
PK06517.1
M01122_2.00 		Cannabis sativa
NCACGTGC
GCACGTGN		 PBM
Lambert et al.(2019)
pTH10104 		0.888 0.922
gw1.270.82.1
M01758_2.00 		Physcomitrella patens
NCACGTGH
DCACGTGN		 PBM
Weirauch et al.(2014)
pTH8457 		0.875 0.902
BHLH74
M06720_2.00 		Arabidopsis thaliana
SDHSDNDNNCACGTGVNNNNW
WNNNNBCACGTGNNHNHSDHS		 Dap-seq
OMalley et al.(2016)
bHLH74_col_a 		0.875 0.902
BHLH74
M06721_2.00 		Arabidopsis thaliana
CACGTGAY
RTCACGTG		 Dap-seq
OMalley et al.(2016)
bHLH74_colamp_a 		0.875 0.902
BHLH77
M06736_2.00 		Arabidopsis thaliana
NKCACGTGVHNWHNB
VNDWNDBCACGTGMN		 Dap-seq
OMalley et al.(2016)
bHLH77_col_a 		0.875 0.882
PK05923.1
M01121_2.00 		Cannabis sativa
NNNNNNN
NNNNNNN		 PBM
Lambert et al.(2019)
pTH11368 		0.868 0.804
BEE2
M01708_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8094 		0.864 0.824
AT2G18300
M01702_2.00 		Arabidopsis thaliana
NBCACGTGCNNN
NNNGCACGTGVN		 PBM
Weirauch et al.(2014)
pTH7289 		0.864 0.804
AT2G18300
M06729_2.00 		Arabidopsis thaliana
ACTGGT
ACCAGT		 Dap-seq
OMalley et al.(2016)
bHLH64_col_a 		0.864 0.804
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.001G103300.1 bHLH 322 372

Links

Other bHLH family TFs
Other Gossypium raimondii TFs

884 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSP00000240050-D1 Bos grunniens ENSP00000240050-D1 N
MTERF2 Bos taurus ENSBTAG00000010144 N
MTERF2 Callithrix jacchus ENSCJAG00000015094 N
MTERF2 Cavia porcellus ENSCPOG00000006958 N
Mterf2 Dipodomys ordii ENSDORG00000004167 N
MTERF2 Gorilla gorilla ENSGGOG00000025492 N
MTERF2 Homo sapiens ENSG00000120832 N
ENSSTOG00000010181 Ictidomys tridecemlineatus ENSSTOG00000010181 N
ENSMEUG00000013008 Macropus eugenii ENSMEUG00000013008 N
MTERF2 Monodelphis domestica ENSMODG00000001589 N
Mterf2 Mus musculus ENSMUSG00000049038 N
Myotis_brandtii_Cry1_10020414 Myotis brandtii Myotis_brandtii_Cry1_10020414 N
ENSNLEG00000006719 Nomascus leucogenys ENSNLEG00000006719 N
MTERF2 Ochotona princeps ENSOPRG00000008669 N
ENSPPYG00000004910 Pongo abelii ENSPPYG00000004910 N
MTERF2 Procavia capensis ENSPCAG00000008234 N
Mterf2 Rattus norvegicus ENSRNOG00000006978 N
ENSTSYG00000010530 Tarsius syrichta ENSTSYG00000010530 N
MTERF2 Tursiops truncatus ENSTTRG00000012809 N
MTERF2 Vicugna pacos ENSVPAG00000008539 N