CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.007G059100
(
Gossypium raimondii
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Gorai.007G059100
T050007_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.007G059100.1
bHLH
47
95
ALKHKTAERHRRKRISRQFDMLRTILPNLIKMDKASVLGETVRQVRELK
Links
Other
bHLH
family TFs
Other
Gossypium raimondii
TFs
32 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TCM_000997
Theobroma cacao
TCM_000997
N
0.871
PGSC0003DMG400023577
Solanum tuberosum
PGSC0003DMG400023577
N
0.866
Solyc04g014360.2
Solanum lycopersicum
Solyc04g014360.2
N
0.866
cassava41468.m1
Manihot esculenta
cassava41468.m1
I
0.862
PRUPE_ppa019545mg
Prunus persica
PRUPE_ppa019545mg
N
0.858
Pm002160
Prunus mume
Pm002160
N
0.858
evm.TU.supercontig_55.51
Carica papaya
evm.TU.supercontig_55.51
N
0.858
gene20797-v1.0-hybrid
Fragaria vesca
gene20797-v1.0-hybrid
N
0.858
Al_scaffold_0007_233
Arabidopsis lyrata
Al_scaffold_0007_233
N
0.857
BHLH131
Arabidopsis thaliana
AT4G38070
N
0.857
Bra010635
Brassica rapa
Bra010635
N
0.857
Bostr.25542s0212
Boechera stricta
Bostr.25542s0212
N
0.857
Cagra.5414s0046
Capsella grandiflora
Cagra.5414s0046
N
0.857
Carubv10003996m.g
Capsella rubella
Carubv10003996m.g
N
0.857
Thhalv10027500m.g
Eutrema salsugineum
Thhalv10027500m.g
N
0.857
Gorai.009G230000
Gossypium raimondii
Gorai.009G230000
N
0.854
Bo3g152990
Brassica oleracea
Bo3g152990
N
0.844
AMTR_s00002p00019320
Amborella trichopoda
AMTR_s00002p00019320
I
0.842
MTR_5g066080
Medicago truncatula
MTR_5g066080
N
0.842
POPTR_0003s14710
Populus trichocarpa
POPTR_0003s14710
I
0.842
Ca_14981
Cicer arietinum
Ca_14981
N
0.842
30068.m002581
Ricinus communis
30068.m002581
I
0.842
cassava39612.m1
Manihot esculenta
cassava39612.m1
I
0.842
cassava40529.m1
Manihot esculenta
cassava40529.m1
I
0.842
cassava45188.m1
Manihot esculenta
cassava45188.m1
I
0.842
cassava45233.m1
Manihot esculenta
cassava45233.m1
I
0.842
cassava45234.m1
Manihot esculenta
cassava45234.m1
I
0.842
Aquca_007_00571
Aquilegia coerulea
Aquca_007_00571
N
0.842
evm.TU.supercontig_1892.1
Carica papaya
evm.TU.supercontig_1892.1
I
0.842
Pavir.Ba01821
Panicum virgatum
Pavir.Ba01821
N
0.842
Pavir.Bb02155
Panicum virgatum
Pavir.Bb02155
N
0.842
SapurV1A.0059s0390
Salix purpurea
SapurV1A.0059s0390
I
0.842