CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Lus10001066.g
(
Linum usitatissimum
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Lus10001066.g
T050129_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Lus10001066
bHLH
110
161
GRVSHITVERNRRKQMNGHLSLLRSLMPSFYVKRGDQASIIGGVVDYIKELQ
Links
Other
bHLH
family TFs
Other
Linum usitatissimum
TFs
120 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Lus10039328.g
Linum usitatissimum
Lus10039328.g
N
0.914
Aquca_037_00084
Aquilegia coerulea
Aquca_037_00084
N
0.894
Lus10014938.g
Linum usitatissimum
Lus10014938.g
N
0.894
SapurV1A.0377s0010
Salix purpurea
SapurV1A.0377s0010
N
0.891
SapurV1A.1043s0040
Salix purpurea
SapurV1A.1043s0040
N
0.891
SPCH
Arabidopsis lyrata
Al_scaffold_0008_1712
N
0.864
AMTR_s00015p00239460
Amborella trichopoda
AMTR_s00015p00239460
N
0.864
SPCH
Arabidopsis thaliana
AT5G53210
N
0.864
BGIOSGA006748
Oryza indica
BGIOSGA006748
N
0.864
Bo2g046020
Brassica oleracea
Bo2g046020
N
0.864
Bo3g022850
Brassica oleracea
Bo3g022850
N
0.864
Bo9g110960
Brassica oleracea
Bo9g110960
N
0.864
Bra003073
Brassica rapa
Bra003073
N
0.864
Bra022638
Brassica rapa
Bra022638
N
0.864
Bra029088
Brassica rapa
Bra029088
N
0.864
BRADI1G38650
Brachypodium distachyon
BRADI1G38650
N
0.864
GLYMA04G41710
Glycine max
GLYMA04G41710
N
0.864
GLYMA06G13081
Glycine max
GLYMA06G13081
N
0.864
GRMZM2G064638
Zea mays
GRMZM2G064638
N
0.864
GRMZM2G085751
Zea mays
GRMZM2G085751
N
0.864
GSMUA_Achr10G01060_001
Musa acuminata
GSMUA_Achr10G01060_001
N
0.864
GSMUA_Achr5G06780_001
Musa acuminata
GSMUA_Achr5G06780_001
N
0.864
GSMUA_Achr8G19870_001
Musa acuminata
GSMUA_Achr8G19870_001
N
0.864
LPERR02G09400
Leersia perrieri
LPERR02G09400
N
0.864
MLOC_54435
Hordeum vulgare
MLOC_54435
N
0.864
MTR_3g090850
Medicago truncatula
MTR_3g090850
N
0.864
OB02G19900
Oryza brachyantha
OB02G19900
N
0.864
OBART02G11110
Oryza barthii
OBART02G11110
N
0.864
OGLUM02G11060
Oryza glumaepatula
OGLUM02G11060
N
0.864
OMERI02G11850
Oryza meridionalis
OMERI02G11850
N
0.864
ONIVA02G12460
Oryza nivara
ONIVA02G12460
N
0.864
OPUNC02G09860
Oryza punctata
OPUNC02G09860
N
0.864
ORGLA02G0100500
Oryza glaberrima
ORGLA02G0100500
N
0.864
ORUFI02G11080
Oryza rufipogon
ORUFI02G11080
N
0.864
OS02G0257500
Oryza sativa
OS02G0257500
N
0.864
PGSC0003DMG400009101
Solanum tuberosum
PGSC0003DMG400009101
N
0.864
POPTR_0012s01370
Populus trichocarpa
POPTR_0012s01370
N
0.864
POPTR_0015s06160
Populus trichocarpa
POPTR_0015s06160
N
0.864
PRUPE_ppa015055mg
Prunus persica
PRUPE_ppa015055mg
N
0.864
Sb04g009390
Sorghum bicolor
Sb04g009390
N
0.864
Sb10g020490
Sorghum bicolor
Sb10g020490
N
0.864
Si006640m.g
Setaria italica
Si006640m.g
N
0.864
Si017482m.g
Setaria italica
Si017482m.g
N
0.864
Solyc03g007410.2
Solanum lycopersicum
Solyc03g007410.2
N
0.864
TCM_015345
Theobroma cacao
TCM_015345
N
0.864
Traes_7DL_1717A9083
Triticum aestivum
Traes_7DL_1717A9083
N
0.864
SPCH
Vitis vinifera
VIT_16s0050g02500
N
0.864
Ca_03951
Cicer arietinum
Ca_03951
N
0.864
Pm019784
Prunus mume
Pm019784
N
0.864
30169.m006534
Ricinus communis
30169.m006534
N
0.864
cassava32469.m1
Manihot esculenta
cassava32469.m1
N
0.864
cassava7222.valid.m1
Manihot esculenta
cassava7222.valid.m1
N
0.864
mgf014552m
Mimulus guttatus
mgf014552m
N
0.864
Bostr.26833s0957
Boechera stricta
Bostr.26833s0957
N
0.864
Cagra.0084s0068
Capsella grandiflora
Cagra.0084s0068
N
0.864
Carubv10026630m.g
Capsella rubella
Carubv10026630m.g
N
0.864
Eucgr.A02667
Eucalyptus grandis
Eucgr.A02667
N
0.864
Gorai.008G270700
Gossypium raimondii
Gorai.008G270700
N
0.864
MDP0000131133
Malus domestica
MDP0000131133
N
0.864
Pavir.Aa02723
Panicum virgatum
Pavir.Aa02723
N
0.864
Pavir.Ab01030
Panicum virgatum
Pavir.Ab01030
N
0.864
Pavir.Da00918
Panicum virgatum
Pavir.Da00918
N
0.864
Pavir.Db01402
Panicum virgatum
Pavir.Db01402
N
0.864
SapurV1A.1227s0030
Salix purpurea
SapurV1A.1227s0030
N
0.864
Thhalv10013877m.g
Eutrema salsugineum
Thhalv10013877m.g
N
0.864
PDK_20s1314901g001
Phoenix dactylifera
PDK_20s1314901g001
N
0.864
BGIOSGA023024
Oryza indica
BGIOSGA023024
N
0.861
BRADI3G09670
Brachypodium distachyon
BRADI3G09670
N
0.861
LPERR06G13950
Leersia perrieri
LPERR06G13950
N
0.861
OBART06G16920
Oryza barthii
OBART06G16920
N
0.861
OGLUM06G17990
Oryza glumaepatula
OGLUM06G17990
N
0.861
OLONG_015104
Oryza longistaminata
OLONG_015104
N
0.861
OMERI06G17780
Oryza meridionalis
OMERI06G17780
N
0.861
ONIVA06G19730
Oryza nivara
ONIVA06G19730
N
0.861
OPUNC06G15310
Oryza punctata
OPUNC06G15310
N
0.861
ORGLA06G0140300
Oryza glaberrima
ORGLA06G0140300
N
0.861
ORUFI06G17910
Oryza rufipogon
ORUFI06G17910
N
0.861
OS06G0526100
Oryza sativa
OS06G0526100
N
0.861
Ciclev10007150m.g
Citrus clementina
Ciclev10007150m.g
N
0.861
orange1.1g042904m.g
Citrus sinensis
orange1.1g042904m.g
N
0.861
PK01904.1
Cannabis sativa
PK01904.1
N
0.861
GLYMA13G08740
Glycine max
GLYMA13G08740
N
0.859
PGSC0003DMG400029634
Solanum tuberosum
PGSC0003DMG400029634
N
0.859
Solyc09g091760.1
Solanum lycopersicum
Solyc09g091760.1
N
0.859
FMA
Vitis vinifera
VIT_05s0029g00050
N
0.859
GSMUA_Achr7G21110_001
Musa acuminata
GSMUA_Achr7G21110_001
N
0.856
GSMUA_Achr7G21190_001
Musa acuminata
GSMUA_Achr7G21190_001
N
0.856
AT1G22490
Arabidopsis thaliana
AT1G22490
N
0.855
Bo5g038570
Brassica oleracea
Bo5g038570
N
0.855
Bo7g057920
Brassica oleracea
Bo7g057920
N
0.855
Bo8g071490
Brassica oleracea
Bo8g071490
N
0.855
Bra016377
Brassica rapa
Bra016377
N
0.855
Bra040856
Brassica rapa
Bra040856
N
0.855
fgenesh1_pg.C_scaffold_1002057
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_1002057
N
0.855
GLYMA04G10630
Glycine max
GLYMA04G10630
N
0.855
GLYMA06G10470
Glycine max
GLYMA06G10470
N
0.855
MTR_3g099620
Medicago truncatula
MTR_3g099620
N
0.855
Ca_01453
Cicer arietinum
Ca_01453
N
0.855
Cla022458
Citrullus lanatus
Cla022458
N
0.855
Cucsa.160250
Cucumis sativus
Cucsa.160250
N
0.855
Bostr.12659s0103
Boechera stricta
Bostr.12659s0103
N
0.855
Cagra.0114s0053
Capsella grandiflora
Cagra.0114s0053
N
0.855
Carubv10011476m.g
Capsella rubella
Carubv10011476m.g
N
0.855
Lus10000332.g
Linum usitatissimum
Lus10000332.g
N
0.855
Thhalv10009836m.g
Eutrema salsugineum
Thhalv10009836m.g
N
0.855
PK21294.1
Cannabis sativa
PK21294.1
N
0.855
PK27921.1
Cannabis sativa
PK27921.1
N
0.855
chr1.LjT40H13.220.nd
Lotus japonicus
chr1.LjT40H13.220.nd
N
0.855
GRMZM2G045109
Zea mays
GRMZM2G045109
N
0.852
mgf011108m
Mimulus guttatus
mgf011108m
N
0.852
evm.TU.supercontig_3.51
Carica papaya
evm.TU.supercontig_3.51
N
0.852
Cla004300
Citrullus lanatus
Cla004300
N
0.851
Cucsa.012930
Cucumis sativus
Cucsa.012930
N
0.851
Bostr.2570s0048
Boechera stricta
Bostr.2570s0048
N
0.850
Bo6g114730
Brassica oleracea
Bo6g114730
N
0.849
MTR_5g064950
Medicago truncatula
MTR_5g064950
N
0.849
PGSC0003DMG400017766
Solanum tuberosum
PGSC0003DMG400017766
N
0.840
Cla016479
Citrullus lanatus
Cla016479
N
0.840
Cucsa.313010
Cucumis sativus
Cucsa.313010
N
0.840
Lus10007139.g
Linum usitatissimum
Lus10007139.g
N
0.840