CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Lus10005451.g
(
Linum usitatissimum
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Lus10005451.g
T050149_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Lus10005451
bHLH
120
166
VQSIAARKRRRRISEKTQELGKLIPGGNKMNTADMFQAAAKYVKFLQ
Links
Other
bHLH
family TFs
Other
Linum usitatissimum
TFs
52 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PRUPE_ppa017597mg
Prunus persica
PRUPE_ppa017597mg
N
0.876
Pm010610
Prunus mume
Pm010610
N
0.876
Al_scaffold_0004_1965
Arabidopsis lyrata
Al_scaffold_0004_1965
N
0.875
BHLH52
Arabidopsis thaliana
AT1G30670
N
0.875
BHLH53
Arabidopsis thaliana
AT2G34820
N
0.875
Bo3g028090
Brassica oleracea
Bo3g028090
N
0.875
Bo4g039270
Brassica oleracea
Bo4g039270
N
0.875
Bra005389
Brassica rapa
Bra005389
N
0.875
fgenesh1_pm.C_scaffold_1002485
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_1002485
N
0.875
Bostr.23794s0621
Boechera stricta
Bostr.23794s0621
N
0.875
Cagra.1508s0136
Capsella grandiflora
Cagra.1508s0136
N
0.875
Carubv10011063m.g
Capsella rubella
Carubv10011063m.g
N
0.875
Thhalv10017751m.g
Eutrema salsugineum
Thhalv10017751m.g
N
0.875
Bra022993
Brassica rapa
Bra022993
N
0.873
Lus10038432.g
Linum usitatissimum
Lus10038432.g
N
0.867
Si038598m.g
Setaria italica
Si038598m.g
N
0.864
Ciclev10017579m.g
Citrus clementina
Ciclev10017579m.g
N
0.864
orange1.1g041370m.g
Citrus sinensis
orange1.1g041370m.g
N
0.864
Bostr.15697s0367
Boechera stricta
Bostr.15697s0367
N
0.863
Bo4g182930
Brassica oleracea
Bo4g182930
N
0.855
Bra021933
Brassica rapa
Bra021933
N
0.855
BRADI4G29370
Brachypodium distachyon
BRADI4G29370
N
0.853
F775_52642
Aegilops tauschii
F775_52642
N
0.853
Traes_5BL_B55F708EC
Triticum aestivum
Traes_5BL_B55F708EC
N
0.853
Traes_5DL_84C86F76D
Triticum aestivum
Traes_5DL_84C86F76D
N
0.853
GLYMA15G41400
Glycine max
GLYMA15G41400
N
0.852
GSMUA_Achr11G16900_001
Musa acuminata
GSMUA_Achr11G16900_001
N
0.852
GSMUA_AchrUn_randomG20690_001
Musa acuminata
GSMUA_AchrUn_randomG20690_001
N
0.852
MTR_1g060700
Medicago truncatula
MTR_1g060700
N
0.850
MTR_2g067000
Medicago truncatula
MTR_2g067000
N
0.850
gene20146-v1.0-hybrid
Fragaria vesca
gene20146-v1.0-hybrid
N
0.844
OB07G14260
Oryza brachyantha
OB07G14260
N
0.842
Pavir.Ca01783
Panicum virgatum
Pavir.Ca01783
N
0.842
Pavir.Ca01784
Panicum virgatum
Pavir.Ca01784
N
0.842
Pavir.Ia04589
Panicum virgatum
Pavir.Ia04589
N
0.842
Pavir.J05526
Panicum virgatum
Pavir.J05526
N
0.842
POPTR_0001s46530
Populus trichocarpa
POPTR_0001s46530
N
0.841
POPTR_0011s16100
Populus trichocarpa
POPTR_0011s16100
N
0.841
VIT_10s0092g00030
Vitis vinifera
VIT_10s0092g00030
N
0.841
cassava27522.m1
Manihot esculenta
cassava27522.m1
N
0.841
evm.TU.supercontig_489.5
Carica papaya
evm.TU.supercontig_489.5
N
0.841
evm.TU.supercontig_489.6
Carica papaya
evm.TU.supercontig_489.6
N
0.841
SapurV1A.0527s0040
Salix purpurea
SapurV1A.0527s0040
N
0.841
Thhalv10009765m.g
Eutrema salsugineum
Thhalv10009765m.g
N
0.840
TCM_033386
Theobroma cacao
TCM_033386
N
0.839
Ca_13608
Cicer arietinum
Ca_13608
N
0.839
Ca_13610
Cicer arietinum
Ca_13610
N
0.839
Eucgr.D01630
Eucalyptus grandis
Eucgr.D01630
N
0.839
gene18542-v1.0-hybrid
Fragaria vesca
gene18542-v1.0-hybrid
N
0.839
MDP0000209483
Malus domestica
MDP0000209483
N
0.839
MDP0000280921
Malus domestica
MDP0000280921
N
0.839
SapurV1A.0602s0120
Salix purpurea
SapurV1A.0602s0120
N
0.839