CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDP0000790939
(
Malus domestica
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
MDP0000790939
T050511_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000790939
bHLH
273
322
YRSKNLIAERNRRTKIKDGLFALRSLVPKITKMNTAAIIGDAIEYIEELQ
Links
Other
bHLH
family TFs
Other
Malus domestica
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
cassava27372.m1
Manihot esculenta
cassava27372.m1
N
0.854
estExt_fgenesh1_pg.C_1240017
Physcomitrella patens
estExt_fgenesh1_pg.C_1240017
I
0.850
gw1.90.96.1
Physcomitrella patens
gw1.90.96.1
I
0.850
SCRM2
Arabidopsis lyrata
Al_scaffold_0001_1326
I
0.849
GSMUA_Achr1G07330_001
Musa acuminata
GSMUA_Achr1G07330_001
I
0.847
GSMUA_Achr1G07450_001
Musa acuminata
GSMUA_Achr1G07450_001
I
0.847
PGSC0003DMG400014246
Solanum tuberosum
PGSC0003DMG400014246
I
0.847
POPTR_0006s07420
Populus trichocarpa
POPTR_0006s07420
I
0.847
Aquca_019_00147
Aquilegia coerulea
Aquca_019_00147
I
0.847
Aquca_072_00056
Aquilegia coerulea
Aquca_072_00056
I
0.847
evm.TU.supercontig_1024.1
Carica papaya
evm.TU.supercontig_1024.1
I
0.847
PDK_20s1347451g001
Phoenix dactylifera
PDK_20s1347451g001
I
0.847
BRADI3G01901
Brachypodium distachyon
BRADI3G01901
I
0.843
cassava15938.m1
Manihot esculenta
cassava15938.m1
N
0.843
evm.TU.supercontig_69.52
Carica papaya
evm.TU.supercontig_69.52
N
0.842
Ciclev10033428m.g
Citrus clementina
Ciclev10033428m.g
I
0.841
orange1.1g041101m.g
Citrus sinensis
orange1.1g041101m.g
I
0.841