orange1.1g023215m.g (Citrus sinensis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 orange1.1g023215m.g T050568_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BHLH80
M06722_2.00 		Arabidopsis thaliana
DNCMACTTGCH
DGCAAGTKGNH		 Dap-seq
OMalley et al.(2016)
bHLH80_col_a 		0.914 0.941
BHLH80
M06723_2.00 		Arabidopsis thaliana
DKCMACTTGCA
TGCAAGTKGMH		 Dap-seq
OMalley et al.(2016)
bHLH80_colamp_a 		0.914 0.941
OS08G0506700
M01755_2.00 		Oryza sativa
NCCACTTGN
NCAAGTGGN		 PBM
Weirauch et al.(2014)
pTH8547 		0.873 0.863
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g023215m bHLH 184 234
orange1.1g024231m bHLH 184 234
orange1.1g025122m bHLH 184 234
orange1.1g025407m bHLH 184 234
orange1.1g026394m bHLH 184 221

Links

Other bHLH family TFs
Other Citrus sinensis TFs

169 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Afo_R000623 Aptenodytes forsteri Afo_R000623 I
Brh_R008967 Buceros rhinoceros Brh_R008967 I
ZBTB49 Anolis carolinensis ENSACAG00000010957 I
ENSAMEG00000013670 Ailuropoda melanoleuca ENSAMEG00000013670 I
ENSAPLG00000003489 Anas platyrhynchos ENSAPLG00000003489 I
ZBTB49 Bos taurus ENSBTAG00000014680 I
ZBTB49 Canis familiaris ENSCAFG00000015688 I
ZBTB49 Callithrix jacchus ENSCJAG00000000119 I
ZBTB49 Cavia porcellus ENSCPOG00000007981 I
ENSCSAG00000016270 Chlorocebus sabaeus ENSCSAG00000016270 I
ZBTB49 Dasypus novemcinctus ENSDNOG00000016261 I
ZBTB49 Equus caballus ENSECAG00000013694 I
ENSFALG00000009426 Ficedula albicollis ENSFALG00000009426 I
ZBTB49 Felis catus ENSFCAG00000015510 I
ZBTB49 Homo sapiens ENSG00000168826 D
ZBTB49 Gallus gallus ENSGALG00000015009 I
ZBTB49 Gorilla gorilla ENSGGOG00000013012 I
ENSLACG00000007886 Latimeria chalumnae ENSLACG00000007886 I
ZBTB49 Loxodonta africana ENSLAFG00000016590 I
ENSLOCG00000009974 Lepisosteus oculatus ENSLOCG00000009974 I
ZBTB49 Meleagris gallopavo ENSMGAG00000012706 I
ENSMICG00000000204 Microcebus murinus ENSMICG00000000204 I
ZBTB49 Myotis lucifugus ENSMLUG00000009904 I
ZBTB49 Macaca mulatta ENSMMUG00000023394 I
ZBTB49 Monodelphis domestica ENSMODG00000001516 I
Zbtb49 Mus musculus ENSMUSG00000029127 I
ENSNLEG00000016142 Nomascus leucogenys ENSNLEG00000016142 I
ENSOARG00000007577 Ovis aries ENSOARG00000007577 I
ZBTB49 Oryctolagus cuniculus ENSOCUG00000007993 I
ZBTB49 Otolemur garnettii ENSOGAG00000000988 I
ENSP00000338807-D1 Bos grunniens ENSP00000338807-D1 I
ENSPANG00000015665 Papio anubis ENSPANG00000015665 I
ENSPPYG00000014601 Pongo abelii ENSPPYG00000014601 I
ENSPSIG00000015554 Pelodiscus sinensis ENSPSIG00000015554 I
ZBTB49 Pan troglodytes ENSPTRG00000015868 I
ZBTB49 Pteropus vampyrus ENSPVAG00000015185 I
Zbtb49 Rattus norvegicus ENSRNOG00000005633 I
ENSSHAG00000008414 Sarcophilus harrisii ENSSHAG00000008414 I
ZBTB49 Sus scrofa ENSSSCG00000008728 I
ENSSTOG00000000550 Ictidomys tridecemlineatus ENSSTOG00000000550 I
ENSTBEG00000005000 Tupaia belangeri ENSTBEG00000005000 I
ZBTB49 Taeniopygia guttata ENSTGUG00000009920 I
Gfo_R014333 Geospiza fortis Gfo_R014333 I
Myotis_brandtii_ZBTB49_10013405 Myotis brandtii Myotis_brandtii_ZBTB49_10013405 I
Pvit_18935 Pogona vitticeps Pvit_18935 I