orange1.1g042649m.g (Citrus sinensis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 orange1.1g042649m.g T050619_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DYT1
M02654_2.00 		Arabidopsis thaliana
TCACGTGWYTBRYK
MRYVARWCACGTGA		 SELEX
Mathelier et al.(2014)
MA0580.1 		0.855 0.755
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g042649m bHLH 29 77

Links

Other bHLH family TFs
Other Citrus sinensis TFs

17 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA15G06950 Glycine max GLYMA15G06950 I 0.894
chr4.CM1616.440.nc Lotus japonicus chr4.CM1616.440.nc I 0.894
LjT46I09.60.nd Lotus japonicus LjT46I09.60.nd I 0.894
Ca_22008 Cicer arietinum Ca_22008 N 0.870
29842.m003700 Ricinus communis 29842.m003700 N 0.870
Gorai.011G019900 Gossypium raimondii Gorai.011G019900 N 0.870
GLYMA13G32370 Glycine max GLYMA13G32370 I 0.867
MTR_4g091910 Medicago truncatula MTR_4g091910 I 0.867
DYT1 Arabidopsis thaliana AT4G21330 D 0.855
Bo3g162600 Brassica oleracea Bo3g162600 I 0.855
Bra013519 Brassica rapa Bra013519 I 0.855
DYT1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_7001824 I 0.855
Bostr.10689s0082 Boechera stricta Bostr.10689s0082 I 0.855
Thhalv10027186m.g Eutrema salsugineum Thhalv10027186m.g I 0.855
PRUPE_ppa021593mg Prunus persica PRUPE_ppa021593mg N 0.840
cassava15938.m1 Manihot esculenta cassava15938.m1 N 0.840
cassava21844.m1 Manihot esculenta cassava21844.m1 N 0.840