Pavir.Eb00817 (Panicum virgatum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Pavir.Eb00817 T050755_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Eb00817.1.p bHLH 212 257

Links

Other bHLH family TFs
Other Panicum virgatum TFs

113 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Si004720m.g Setaria italica Si004720m.g N 0.914
AC216731.3_FG001 Zea mays AC216731.3_FG001 N 0.911
AMTR_s00024p00250370 Amborella trichopoda AMTR_s00024p00250370 N 0.911
BHLH83 Arabidopsis thaliana AT1G66470 N 0.911
BHLH86 Arabidopsis thaliana AT5G37800 N 0.911
BGIOSGA002533 Oryza indica BGIOSGA002533 N 0.911
BGIOSGA008903 Oryza indica BGIOSGA008903 N 0.911
Bo00835s050 Brassica oleracea Bo00835s050 N 0.911
Bo6g101000 Brassica oleracea Bo6g101000 N 0.911
Bra019708 Brassica rapa Bra019708 N 0.911
BRADI2G01000 Brachypodium distachyon BRADI2G01000 N 0.911
F775_23458 Aegilops tauschii F775_23458 N 0.911
RSL1 Arabidopsis lyrata fgenesh2_kg.7__3192__AT5G37800.1 N 0.911
GLYMA02G41370 Glycine max GLYMA02G41370 N 0.911
GLYMA11G33840 Glycine max GLYMA11G33840 N 0.911
GLYMA14G07590 Glycine max GLYMA14G07590 N 0.911
GLYMA18G04420 Glycine max GLYMA18G04420 N 0.911
GSMUA_Achr10G20230_001 Musa acuminata GSMUA_Achr10G20230_001 N 0.911
GSMUA_Achr2G22860_001 Musa acuminata GSMUA_Achr2G22860_001 N 0.911
GSMUA_Achr6G09370_001 Musa acuminata GSMUA_Achr6G09370_001 N 0.911
LPERR01G00690 Leersia perrieri LPERR01G00690 N 0.911
LPERR02G24230 Leersia perrieri LPERR02G24230 N 0.911
MTR_5g079500 Medicago truncatula MTR_5g079500 N 0.911
OB01G10850 Oryza brachyantha OB01G10850 N 0.911
OB02G36990 Oryza brachyantha OB02G36990 N 0.911
OBART01G00850 Oryza barthii OBART01G00850 N 0.911
OBART02G29800 Oryza barthii OBART02G29800 N 0.911
OGLUM01G00830 Oryza glumaepatula OGLUM01G00830 N 0.911
OGLUM02G30450 Oryza glumaepatula OGLUM02G30450 N 0.911
OLONG_010619 Oryza longistaminata OLONG_010619 N 0.911
OMERI01G00290 Oryza meridionalis OMERI01G00290 N 0.911
OMERI02G28660 Oryza meridionalis OMERI02G28660 N 0.911
ONIVA01G00780 Oryza nivara ONIVA01G00780 N 0.911
ONIVA02G32560 Oryza nivara ONIVA02G32560 N 0.911
OPUNC01G00700 Oryza punctata OPUNC01G00700 N 0.911
OPUNC02G27370 Oryza punctata OPUNC02G27370 N 0.911
ORGLA01G0007400 Oryza glaberrima ORGLA01G0007400 N 0.911
ORGLA02G0253300 Oryza glaberrima ORGLA02G0253300 N 0.911
ORUFI01G00830 Oryza rufipogon ORUFI01G00830 N 0.911
ORUFI02G31420 Oryza rufipogon ORUFI02G31420 N 0.911
OS01G0111500 Oryza sativa OS01G0111500 N 0.911
OS02G0710300 Oryza sativa OS02G0710300 N 0.911
PGSC0003DMG400030650 Solanum tuberosum PGSC0003DMG400030650 N 0.911
POPTR_0004s08770 Populus trichocarpa POPTR_0004s08770 N 0.911
POPTR_0005s14360 Populus trichocarpa POPTR_0005s14360 N 0.911
PRUPE_ppa025775mg Prunus persica PRUPE_ppa025775mg N 0.911
Sb04g030230 Sorghum bicolor Sb04g030230 N 0.911
RHD6 Arabidopsis lyrata scaffold_201372.1 N 0.911
Si019575m.g Setaria italica Si019575m.g N 0.911
Solyc02g091440.1 Solanum lycopersicum Solyc02g091440.1 N 0.911
TCM_019210 Theobroma cacao TCM_019210 N 0.911
Traes_3AS_0D78930B4 Triticum aestivum Traes_3AS_0D78930B4 N 0.911
TRAES3BF060500180CFD_g Triticum aestivum TRAES3BF060500180CFD_g N 0.911
TRIUR3_11692 Triticum urartu TRIUR3_11692 N 0.911
VIT_14s0006g01470 Vitis vinifera VIT_14s0006g01470 N 0.911
Ca_16136 Cicer arietinum Ca_16136 N 0.911
Cla020067 Citrullus lanatus Cla020067 N 0.911
Pm014359 Prunus mume Pm014359 N 0.911
28609.m000209 Ricinus communis 28609.m000209 N 0.911
cassava10199.m1 Manihot esculenta cassava10199.m1 N 0.911
Cucsa.006340 Cucumis sativus Cucsa.006340 N 0.911
mgf025678m Mimulus guttatus mgf025678m N 0.911
Aquca_041_00164 Aquilegia coerulea Aquca_041_00164 N 0.911
Bostr.26959s0271 Boechera stricta Bostr.26959s0271 N 0.911
Bostr.9638s0100 Boechera stricta Bostr.9638s0100 N 0.911
Cagra.2629s0001 Capsella grandiflora Cagra.2629s0001 N 0.911
Carubv10007389m.g Capsella rubella Carubv10007389m.g N 0.911
Carubv10021322m.g Capsella rubella Carubv10021322m.g N 0.911
Ciclev10013420m.g Citrus clementina Ciclev10013420m.g N 0.911
Eucgr.F02831 Eucalyptus grandis Eucgr.F02831 N 0.911
evm.TU.contig_27490 Carica papaya evm.TU.contig_27490 N 0.911
gene17937-v1.0-hybrid Fragaria vesca gene17937-v1.0-hybrid N 0.911
Gorai.001G086800 Gossypium raimondii Gorai.001G086800 N 0.911
Gorai.004G064400 Gossypium raimondii Gorai.004G064400 N 0.911
Lus10017634.g Linum usitatissimum Lus10017634.g N 0.911
Lus10033592.g Linum usitatissimum Lus10033592.g N 0.911
MDP0000435722 Malus domestica MDP0000435722 N 0.911
orange1.1g038918m.g Citrus sinensis orange1.1g038918m.g N 0.911
Pavir.Aa00611 Panicum virgatum Pavir.Aa00611 N 0.911
Pavir.J04215 Panicum virgatum Pavir.J04215 N 0.911
Pavir.J20533 Panicum virgatum Pavir.J20533 N 0.911
SapurV1A.0102s0280 Salix purpurea SapurV1A.0102s0280 N 0.911
SapurV1A.0230s0340 Salix purpurea SapurV1A.0230s0340 N 0.911
Thhalv10018927m.g Eutrema salsugineum Thhalv10018927m.g N 0.911
Thhalv10028239m.g Eutrema salsugineum Thhalv10028239m.g N 0.911
SELMODRAFT_413232 Selaginella moellendorffii SELMODRAFT_413232 N 0.891
SELMODRAFT_426794 Selaginella moellendorffii SELMODRAFT_426794 N 0.891
SELMODRAFT_409967 Selaginella moellendorffii SELMODRAFT_409967 N 0.889
SELMODRAFT_414414 Selaginella moellendorffii SELMODRAFT_414414 N 0.889
estExt_fgenesh1_pg.C_1470079 Physcomitrella patens estExt_fgenesh1_pg.C_1470079 N 0.885
estExt_fgenesh1_pg.C_840011 Physcomitrella patens estExt_fgenesh1_pg.C_840011 N 0.885
GSMUA_Achr3G01250_001 Musa acuminata GSMUA_Achr3G01250_001 N 0.881
BRADI1G42440 Brachypodium distachyon BRADI1G42440 N 0.879
F775_02947 Aegilops tauschii F775_02947 N 0.879
GRMZM2G066057 Zea mays GRMZM2G066057 N 0.879
MLOC_37511 Hordeum vulgare MLOC_37511 N 0.879
Sb03g008290 Sorghum bicolor Sb03g008290 N 0.879
Traes_7BS_A0A8B25DF Triticum aestivum Traes_7BS_A0A8B25DF N 0.879
Traes_7DS_4053B6E88 Triticum aestivum Traes_7DS_4053B6E88 N 0.879
TRIUR3_14379 Triticum urartu TRIUR3_14379 N 0.879
Pavir.Db01008 Panicum virgatum Pavir.Db01008 N 0.879
BRADI3G53060 Brachypodium distachyon BRADI3G53060 N 0.876
Cagra.8123s0001 Capsella grandiflora Cagra.8123s0001 N 0.876
F775_25020 Aegilops tauschii F775_25020 N 0.865
F775_43492 Aegilops tauschii F775_43492 N 0.865
Traes_6BL_9B25E6A10 Triticum aestivum Traes_6BL_9B25E6A10 N 0.865
Traes_6BL_A964BE52B Triticum aestivum Traes_6BL_A964BE52B N 0.865
Traes_6DL_3DCFAB31F Triticum aestivum Traes_6DL_3DCFAB31F N 0.865
TRIUR3_27166 Triticum urartu TRIUR3_27166 N 0.865
SELMODRAFT_418491 Selaginella moellendorffii SELMODRAFT_418491 N 0.859
SELMODRAFT_423809 Selaginella moellendorffii SELMODRAFT_423809 N 0.859
OB0081G10010 Oryza brachyantha OB0081G10010 N 0.849
F775_03185 Aegilops tauschii F775_03185 N 0.844