Pavir.J05526 (Panicum virgatum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Pavir.J05526 T050870_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J05526.1.p bHLH 136 181

Links

Other bHLH family TFs
Other Panicum virgatum TFs

13 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.Ca01783 Panicum virgatum Pavir.Ca01783 N 0.888
Pavir.Ca01784 Panicum virgatum Pavir.Ca01784 N 0.888
Pavir.Ia04589 Panicum virgatum Pavir.Ia04589 N 0.888
Sb01g048400 Sorghum bicolor Sb01g048400 N 0.875
Si038598m.g Setaria italica Si038598m.g N 0.866
GRMZM2G137374 Zea mays GRMZM2G137374 N 0.864
GSMUA_Achr11G16900_001 Musa acuminata GSMUA_Achr11G16900_001 N 0.855
GSMUA_AchrUn_randomG20690_001 Musa acuminata GSMUA_AchrUn_randomG20690_001 N 0.855
BRADI4G29370 Brachypodium distachyon BRADI4G29370 N 0.851
F775_52642 Aegilops tauschii F775_52642 N 0.851
Traes_5BL_B55F708EC Triticum aestivum Traes_5BL_B55F708EC N 0.851
Traes_5DL_84C86F76D Triticum aestivum Traes_5DL_84C86F76D N 0.851
Lus10005451.g Linum usitatissimum Lus10005451.g N 0.842