Pavir.J29678 (Panicum virgatum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Pavir.J29678 T050926_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J29678.1.p bHLH 139 192

Links

Other bHLH family TFs
Other Panicum virgatum TFs

64 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_019_00196 Aquilegia coerulea Aquca_019_00196 N 0.866
Bo3g040310 Brassica oleracea Bo3g040310 N 0.846
Bo4g071850 Brassica oleracea Bo4g071850 N 0.846
Bo4g165090 Brassica oleracea Bo4g165090 N 0.846
Bostr.27991s0112 Boechera stricta Bostr.27991s0112 N 0.846
Bra000495 Brassica rapa Bra000495 N 0.846
Bra011972 Brassica rapa Bra011972 N 0.846
Bra034392 Brassica rapa Bra034392 N 0.846
BRADI5G07720 Brachypodium distachyon BRADI5G07720 N 0.866
Cagra.12562s0002 Capsella grandiflora Cagra.12562s0002 N 0.846
Carubv10023654m.g Capsella rubella Carubv10023654m.g N 0.846
cassava28523.m1 Manihot esculenta cassava28523.m1 N 0.866
Ca_17453 Cicer arietinum Ca_17453 N 0.890
chr3.CM0070.320.nc Lotus japonicus chr3.CM0070.320.nc N 0.866
chr3.CM0396.580.nc Lotus japonicus chr3.CM0396.580.nc N 0.866
Cla008847 Citrullus lanatus Cla008847 N 0.866
Cucsa.385700 Cucumis sativus Cucsa.385700 N 0.866
Eucgr.B03931 Eucalyptus grandis Eucgr.B03931 N 0.866
evm.TU.contig_28125.2 Carica papaya evm.TU.contig_28125.2 N 0.866
FIT Arabidopsis thaliana AT2G28160 N 0.846
FIT1 Vitis vinifera VIT_06s0061g00720 N 0.890
FIT1 Populus trichocarpa POPTR_0009s01100 N 0.866
FIT1 Arabidopsis lyrata fgenesh2_kg.4__753__AT2G28160.1 N 0.846
gene24607-v1.0-hybrid Fragaria vesca gene24607-v1.0-hybrid N 0.846
gene24608-v1.0-hybrid Fragaria vesca gene24608-v1.0-hybrid N 0.866
GLYMA11G19850 Glycine max GLYMA11G19850 N 0.866
GLYMA12G08640 Glycine max GLYMA12G08640 N 0.846
GLYMA12G30240 Glycine max GLYMA12G30240 N 0.855
GLYMA13G39650 Glycine max GLYMA13G39650 N 0.866
Gorai.009G090400 Gossypium raimondii Gorai.009G090400 N 0.866
GRMZM2G107672 Zea mays GRMZM2G107672 N 0.890
GRMZM2G173521 Zea mays GRMZM2G173521 N 0.890
GSMUA_Achr6G27600_001 Musa acuminata GSMUA_Achr6G27600_001 N 0.890
LPERR04G07210 Leersia perrieri LPERR04G07210 N 0.890
MLOC_6707 Hordeum vulgare MLOC_6707 N 0.866
MTR_2g084280 Medicago truncatula MTR_2g084280 N 0.846
MTR_4g057270 Medicago truncatula MTR_4g057270 N 0.846
OB04G17410 Oryza brachyantha OB04G17410 N 0.890
OBART04G10120 Oryza barthii OBART04G10120 N 0.890
OGLUM04G09730 Oryza glumaepatula OGLUM04G09730 N 0.890
OLONG_016577 Oryza longistaminata OLONG_016577 N 0.890
ONIVA04G07960 Oryza nivara ONIVA04G07960 N 0.890
OPUNC04G08160 Oryza punctata OPUNC04G08160 N 0.890
ORGLA02G0343900 Oryza glaberrima ORGLA02G0343900 N 0.890
ORGLA04G0072000 Oryza glaberrima ORGLA04G0072000 N 0.890
ORUFI04G11150 Oryza rufipogon ORUFI04G11150 N 0.890
OS04G0381700 Oryza sativa OS04G0381700 N 0.890
Pavir.Ga01979 Panicum virgatum Pavir.Ga01979 N 0.887
Pavir.J28741 Panicum virgatum Pavir.J28741 N 0.890
PDK_20s1479721g001 Phoenix dactylifera PDK_20s1479721g001 N 0.866
PGSC0003DMG400019017 Solanum tuberosum PGSC0003DMG400019017 N 0.855
PK26582.1 Cannabis sativa PK26582.1 N 0.866
Pm001154 Prunus mume Pm001154 N 0.863
PRUPE_ppa018718mg Prunus persica PRUPE_ppa018718mg N 0.863
SapurV1A.1382s0060 Salix purpurea SapurV1A.1382s0060 N 0.866
Sb06g012030 Sorghum bicolor Sb06g012030 N 0.890
Si010468m.g Setaria italica Si010468m.g N 0.890
Si010533m.g Setaria italica Si010533m.g N 0.890
Solyc06g051550.2 Solanum lycopersicum Solyc06g051550.2 N 0.855
TCM_041590 Theobroma cacao TCM_041590 N 0.866
Thhalv10016957m.g Eutrema salsugineum Thhalv10016957m.g N 0.846
Traes_2AL_088338613 Triticum aestivum Traes_2AL_088338613 N 0.866
Traes_2BL_F442E87DD Triticum aestivum Traes_2BL_F442E87DD N 0.866
Traes_2DL_47E8C44C6 Triticum aestivum Traes_2DL_47E8C44C6 N 0.866