CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SapurV1A.0850s0170
(
Salix purpurea
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
SapurV1A.0850s0170
T051115_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AT2G42280
M06733_2.00
Arabidopsis thaliana
DNCMACTTGYH
DRCAAGTKGNH
Dap-seq
OMalley et al.(2016)
bHLH130_col_a
0.861
0.959
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SapurV1A.0850s0170.1.p
bHLH
246
319
HPRSIAERVSRTRISERMRKLQDLVPNMDKVKSFHFSLSASFVSLIDNALFPHLQQTNTSDMLDLAVDYIKDLQ
SapurV1A.0850s0170.2.p
bHLH
246
294
HPRSIAERVSRTRISERMRKLQDLVPNMDKQTNTSDMLDLAVDYIKDLQ
SapurV1A.0850s0170.3.p
bHLH
246
294
HPRSIAERVSRTRISERMRKLQDLVPNMDKQTNTSDMLDLAVDYIKDLQ
Links
Other
bHLH
family TFs
Other
Salix purpurea
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AT2G42280
Arabidopsis thaliana
AT2G42280
D
0.861
POPTR_0003s22290
Populus trichocarpa
POPTR_0003s22290
I
0.861
scaffold_403077.1
Arabidopsis lyrata
scaffold_403077.1
I
0.861
VIT_06s0004g01740
Vitis vinifera
VIT_06s0004g01740
I
0.861
30169.m006403
Ricinus communis
30169.m006403
I
0.861
Cagra.2636s0012
Capsella grandiflora
Cagra.2636s0012
I
0.861
Carubv10023498m.g
Capsella rubella
Carubv10023498m.g
I
0.861
MDP0000307685
Malus domestica
MDP0000307685
I
0.861
SapurV1A.0009s0400
Salix purpurea
SapurV1A.0009s0400
I
0.861
LPERR08G16800
Leersia perrieri
LPERR08G16800
I
0.849
LPERR09G10800
Leersia perrieri
LPERR09G10800
I
0.849
Bostr.25993s0551
Boechera stricta
Bostr.25993s0551
I
0.840