Thhalv10027186m.g (Eutrema salsugineum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Thhalv10027186m.g T051293_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DYT1
M02654_2.00 		Arabidopsis thaliana
TCACGTGWYTBRYK
MRYVARWCACGTGA		 SELEX
Mathelier et al.(2014)
MA0580.1 		0.914 0.980
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10027186m bHLH 30 78

Links

Other bHLH family TFs
Other Eutrema salsugineum TFs

15 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
DYT1 Arabidopsis thaliana AT4G21330 D 0.914
Bo3g162600 Brassica oleracea Bo3g162600 I 0.894
Bra013519 Brassica rapa Bra013519 I 0.894
DYT1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_7001824 I 0.894
Bostr.10689s0082 Boechera stricta Bostr.10689s0082 I 0.894
MTR_4g091910 Medicago truncatula MTR_4g091910 I 0.881
Cagra.1062s0003 Capsella grandiflora Cagra.1062s0003 I 0.870
Carubv10007380m.g Capsella rubella Carubv10007380m.g I 0.870
Bo1g024080 Brassica oleracea Bo1g024080 I 0.864
GLYMA13G32370 Glycine max GLYMA13G32370 I 0.855
GLYMA15G06950 Glycine max GLYMA15G06950 I 0.855
orange1.1g042649m.g Citrus sinensis orange1.1g042649m.g I 0.855
chr4.CM1616.440.nc Lotus japonicus chr4.CM1616.440.nc I 0.855
LjT46I09.60.nd Lotus japonicus LjT46I09.60.nd I 0.855
AMTR_s00019p00254380 Amborella trichopoda AMTR_s00019p00254380 I 0.845