CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Thhalv10027332m.g
(
Eutrema salsugineum
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Thhalv10027332m.g
T051294_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thhalv10027332m
bHLH
53
99
SKNVVSERNRRQKLNQRLFALRSVVPNITKLDKASVIKDSIDYMQEL
Links
Other
bHLH
family TFs
Other
Eutrema salsugineum
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BHLH27
Arabidopsis thaliana
AT4G29930
N
0.914
Bo7g114110
Brassica oleracea
Bo7g114110
N
0.914
Bra024115
Brassica rapa
Bra024115
N
0.914
Bostr.7867s0840
Boechera stricta
Bostr.7867s0840
N
0.914
Cagra.0268s0010
Capsella grandiflora
Cagra.0268s0010
N
0.914
Carubv10006422m.g
Capsella rubella
Carubv10006422m.g
N
0.914
fgenesh2_kg.7__1196__AT4G29930.1
Arabidopsis lyrata
fgenesh2_kg.7__1196__AT4G29930.1
N
0.911
Bo1g014720
Brassica oleracea
Bo1g014720
N
0.890
Bra011152
Brassica rapa
Bra011152
N
0.890
AT5G57150
Arabidopsis thaliana
AT5G57150
N
0.877
Bo3g019430
Brassica oleracea
Bo3g019430
N
0.877
Bo9g130890
Brassica oleracea
Bo9g130890
N
0.877
Bra002756
Brassica rapa
Bra002756
N
0.877
Bra006831
Brassica rapa
Bra006831
N
0.877
Bra020462
Brassica rapa
Bra020462
N
0.877
fgenesh2_kg.8__1627__AT5G57150.1
Arabidopsis lyrata
fgenesh2_kg.8__1627__AT5G57150.1
N
0.877
Bostr.26833s0543
Boechera stricta
Bostr.26833s0543
N
0.877
Cagra.1569s0024
Capsella grandiflora
Cagra.1569s0024
N
0.877
Thhalv10014506m.g
Eutrema salsugineum
Thhalv10014506m.g
N
0.877
mgf024029m
Mimulus guttatus
mgf024029m
I
0.853
Gorai.009G002200
Gossypium raimondii
Gorai.009G002200
I
0.853
AMS
Populus trichocarpa
POPTR_0009s13860
I
0.846
PRUPE_ppa022211mg
Prunus persica
PRUPE_ppa022211mg
I
0.846
Pm020879
Prunus mume
Pm020879
I
0.846
mgf018455m
Mimulus guttatus
mgf018455m
I
0.846
gene23716-v1.0-hybrid
Fragaria vesca
gene23716-v1.0-hybrid
I
0.846
SapurV1A.0218s0460
Salix purpurea
SapurV1A.0218s0460
I
0.846
GSMUA_Achr6G30900_001
Musa acuminata
GSMUA_Achr6G30900_001
N
0.843
Lus10030880.g
Linum usitatissimum
Lus10030880.g
N
0.841
MDP0000243628
Malus domestica
MDP0000243628
I
0.841