Thhalv10027582m.g (Eutrema salsugineum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Thhalv10027582m.g T051297_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PIF1
M01703_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8733 		0.866 0.860
PIF1
M08404_2.00 		Arabidopsis thaliana
NCACGTGWSNYNHH
DDNRNSWCACGTGN		 ChIP-chip
Mathelier et al.(2014)
MA0552.1 		0.866 0.860
PIF1
M09783_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PIF1_01 		0.866 0.860
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10027582m bHLH 289 338

Links

Other bHLH family TFs
Other Eutrema salsugineum TFs

62 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gorai.007G151900 Gossypium raimondii Gorai.007G151900 I 0.885
PIF1 Arabidopsis thaliana AT2G20180 D 0.866
Bo7g003890 Brassica oleracea Bo7g003890 I 0.866
PIL5 Arabidopsis lyrata fgenesh1_pm.C_scaffold_3002562 I 0.866
Bostr.7903s0150 Boechera stricta Bostr.7903s0150 I 0.866
Cagra.0338s0008 Capsella grandiflora Cagra.0338s0008 I 0.866
Carubv10013621m.g Capsella rubella Carubv10013621m.g I 0.866
Thhalv10001974m.g Eutrema salsugineum Thhalv10001974m.g I 0.866
GLYMA03G32747 Glycine max GLYMA03G32747 I 0.863
GLYMA10G04890 Glycine max GLYMA10G04890 I 0.863
GLYMA13G19250 Glycine max GLYMA13G19250 I 0.863
MTR_1g069155 Medicago truncatula MTR_1g069155 I 0.863
MTR_7g099540 Medicago truncatula MTR_7g099540 I 0.863
POPTR_0002s25410 Populus trichocarpa POPTR_0002s25410 I 0.863
PRUPE_ppa004070mg Prunus persica PRUPE_ppa004070mg I 0.863
TCM_003125 Theobroma cacao TCM_003125 I 0.863
Ca_07691 Cicer arietinum Ca_07691 I 0.863
Ca_12298 Cicer arietinum Ca_12298 I 0.863
30204.m001816 Ricinus communis 30204.m001816 I 0.863
cassava2968.m1 Manihot esculenta cassava2968.m1 I 0.863
cassava34241.m1 Manihot esculenta cassava34241.m1 I 0.863
mgf008404m Mimulus guttatus mgf008404m I 0.863
Aquca_034_00180 Aquilegia coerulea Aquca_034_00180 I 0.863
Ciclev10019585m.g Citrus clementina Ciclev10019585m.g I 0.863
evm.TU.supercontig_8.199 Carica papaya evm.TU.supercontig_8.199 I 0.863
gene08411-v1.0-hybrid Fragaria vesca gene08411-v1.0-hybrid I 0.863
Gorai.001G183400 Gossypium raimondii Gorai.001G183400 I 0.863
Gorai.001G234900 Gossypium raimondii Gorai.001G234900 I 0.863
Lus10011899.g Linum usitatissimum Lus10011899.g I 0.863
Lus10022833.g Linum usitatissimum Lus10022833.g I 0.863
MDP0000289642 Malus domestica MDP0000289642 I 0.863
orange1.1g014090m.g Citrus sinensis orange1.1g014090m.g I 0.863
SapurV1A.0937s0140 Salix purpurea SapurV1A.0937s0140 I 0.863
PK06970.1 Cannabis sativa PK06970.1 I 0.863
Cagra.1225s0008 Capsella grandiflora Cagra.1225s0008 I 0.853
Carubv10007459m.g Capsella rubella Carubv10007459m.g I 0.853
GLYMA02G19000 Glycine max GLYMA02G19000 I 0.851
GSMUA_Achr6G30080_001 Musa acuminata GSMUA_Achr6G30080_001 I 0.850
PGSC0003DMG400018950 Solanum tuberosum PGSC0003DMG400018950 I 0.850
Solyc09g063010.2 Solanum lycopersicum Solyc09g063010.2 I 0.850
Cla002793 Citrullus lanatus Cla002793 I 0.850
Cla015231 Citrullus lanatus Cla015231 I 0.850
Cucsa.078700 Cucumis sativus Cucsa.078700 I 0.850
BRADI3G54640 Brachypodium distachyon BRADI3G54640 I 0.844
GLYMA11G05810 Glycine max GLYMA11G05810 I 0.844
LPERR02G30060 Leersia perrieri LPERR02G30060 I 0.844
OLONG_013198 Oryza longistaminata OLONG_013198 I 0.844
Pavir.Ab03239 Panicum virgatum Pavir.Ab03239 I 0.844
Pavir.J11618 Panicum virgatum Pavir.J11618 I 0.844
GSMUA_Achr1G16830_001 Musa acuminata GSMUA_Achr1G16830_001 I 0.843
BGIOSGA005408 Oryza indica BGIOSGA005408 I 0.842
GRMZM2G030744 Zea mays GRMZM2G030744 I 0.842
OB02G43130 Oryza brachyantha OB02G43130 I 0.842
OGLUM02G37650 Oryza glumaepatula OGLUM02G37650 I 0.842
OMERI02G34410 Oryza meridionalis OMERI02G34410 I 0.842
ONIVA02G38510 Oryza nivara ONIVA02G38510 I 0.842
OPUNC02G33630 Oryza punctata OPUNC02G33630 I 0.842
ORGLA02G0316800 Oryza glaberrima ORGLA02G0316800 I 0.842
ORUFI02G37990 Oryza rufipogon ORUFI02G37990 I 0.842
OS02G0805250 Oryza sativa OS02G0805250 I 0.842
Sb04g036450 Sorghum bicolor Sb04g036450 I 0.842
Si017762m.g Setaria italica Si017762m.g I 0.842