CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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chr3.LjT46L11.40.nc
(
Lotus japonicus
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
chr3.LjT46L11.40.nc
T052039_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
chr3.LjT46L11.40.nc
bHLH
155
203
HPRSIAERERRTRISSRIKKLQGLFPQSDKQTSTADLLDLTTEYIKGLQ
Links
Other
bHLH
family TFs
Other
Lotus japonicus
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA08G16190
Glycine max
GLYMA08G16190
I
0.852
GLYMA12G36750
Glycine max
GLYMA12G36750
I
0.852
GLYMA13G27455
Glycine max
GLYMA13G27455
I
0.852
MTR_3g027650
Medicago truncatula
MTR_3g027650
I
0.852
MTR_3g028520
Medicago truncatula
MTR_3g028520
I
0.852
Cucsa.050160
Cucumis sativus
Cucsa.050160
I
0.852
POPTR_0001s27680
Populus trichocarpa
POPTR_0001s27680
I
0.841
Cla015469
Citrullus lanatus
Cla015469
I
0.841
SapurV1A.0111s0030
Salix purpurea
SapurV1A.0111s0030
I
0.841
SapurV1A.1898s0040
Salix purpurea
SapurV1A.1898s0040
I
0.841
GLYMA15G42680
Glycine max
GLYMA15G42680
I
0.840
Ca_26916
Cicer arietinum
Ca_26916
I
0.840
30149.m000231
Ricinus communis
30149.m000231
I
0.838
cassava35513.valid.m1
Manihot esculenta
cassava35513.valid.m1
I
0.838
evm.TU.supercontig_85.115
Carica papaya
evm.TU.supercontig_85.115
I
0.838