CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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D918_01871
(
Trichuris suis
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
D918_01871
T053754_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TCF3
M02775_2.00
Homo sapiens
NVCACCTGBN
NVCAGGTGBN
SELEX
Jolma et al.(2013)
TCF3_1
0.858
0.846
TCF3
M08710_2.00
Homo sapiens
VVCASCTGCHN
NDGCAGSTGBB
Misc
Kulakovskiy et al.(2013)
TFE2_HUMAN.H11MO.0.A
0.858
0.846
TCF3
M09791_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E12_Q6
0.858
0.846
TCF3
M09792_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2A_Q6_01
0.858
0.846
TCF3
M09793_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2A_Q6_02
0.858
0.846
TCF3
M09794_2.00
Homo sapiens
VVVVMCACCTGCNBB
VVNGCAGGTGKBBBB
Transfac
Matys et al.(2006)
V$E47_01
0.858
0.846
TCF3
M09795_2.00
Homo sapiens
NNKWRCACCTGYDNNN
NNNHRCAGGTGYWMNN
Transfac
Matys et al.(2006)
V$E47_02
0.858
0.846
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
D918_01871
bHLH
342
395
RRSANNARERVRVRDINEAFKELGRMCSMHLNAEKVQTKLGILHQAVSVITALE
Links
Other
bHLH
family TFs
Other
Trichuris suis
TFs
62 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TMUE_s0043005200
Trichuris muris
TMUE_s0043005200
I
0.914
TTRE_0000494001
Trichuris trichiura
TTRE_0000494001
I
0.914
EFV53122
Trichinella spiralis
EFV53122
I
0.884
ENSACAG00000027602
Anolis carolinensis
ENSACAG00000027602
I
0.860
TCF3
Callithrix jacchus
ENSCJAG00000004642
I
0.860
TCF3
Felis catus
ENSFCAG00000023514
I
0.860
TCF3
Homo sapiens
ENSG00000071564
D
0.860
TCF3
Gallus gallus
ENSGALG00000001093
I
0.860
TCF3
Gorilla gorilla
ENSGGOG00000003667
I
0.860
TCF3
Meleagris gallopavo
ENSMGAG00000002388
I
0.860
TCF3
Macaca mulatta
ENSMMUG00000009017
I
0.860
ENSPANG00000016063
Papio anubis
ENSPANG00000016063
I
0.860
tcf12
Tetraodon nigroviridis
ENSTNIG00000009326
I
0.860
ENSTNIG00000010330
Tetraodon nigroviridis
ENSTNIG00000010330
I
0.860
ENSTRUG00000002569
Takifugu rubripes
ENSTRUG00000002569
I
0.860
tcf12
Takifugu rubripes
ENSTRUG00000017855
I
0.860
ML223014a
Mnemiopsis leidyi
ML223014a
N
0.860
Cmyd_10006705
Chelonia mydas
Cmyd_10006705
I
0.860
Ogr01317
Ophisaurus gracilis
Ogr01317
I
0.860
SNAPOd2T00003591001
Oikopleura dioica
SNAPOd2T00003591001
I
0.860
ENSAMEG00000003503
Ailuropoda melanoleuca
ENSAMEG00000003503
I
0.858
ENSAPLG00000001939
Anas platyrhynchos
ENSAPLG00000001939
I
0.858
TCF3
Cavia porcellus
ENSCPOG00000023586
I
0.858
Tcf3
Dipodomys ordii
ENSDORG00000004745
I
0.858
TCF3
Echinops telfairi
ENSETEG00000015388
I
0.858
ENSFALG00000011409
Ficedula albicollis
ENSFALG00000011409
I
0.858
ENSGMOG00000004189
Gadus morhua
ENSGMOG00000004189
I
0.858
ENSLACG00000016589
Latimeria chalumnae
ENSLACG00000016589
I
0.858
ENSMEUG00000014058
Macropus eugenii
ENSMEUG00000014058
I
0.858
TCF3
Myotis lucifugus
ENSMLUG00000011221
I
0.858
TCF3
Monodelphis domestica
ENSMODG00000004143
I
0.858
ENSMPUG00000008024
Mustela putorius furo
ENSMPUG00000008024
I
0.858
ENSNLEG00000001742
Nomascus leucogenys
ENSNLEG00000001742
I
0.858
TCF3
Ornithorhynchus anatinus
ENSOANG00000014335
I
0.858
ENSOARG00000012495
Ovis aries
ENSOARG00000012495
I
0.858
TCF3
Otolemur garnettii
ENSOGAG00000003587
I
0.858
ENSONIG00000010206
Oreochromis niloticus
ENSONIG00000010206
I
0.858
ENSPPYG00000009327
Pongo abelii
ENSPPYG00000009327
I
0.858
ENSPSIG00000004202
Pelodiscus sinensis
ENSPSIG00000004202
I
0.858
TCF3
Pan troglodytes
ENSPTRG00000010211
I
0.858
TCF3
Pteropus vampyrus
ENSPVAG00000014587
I
0.858
ENSSHAG00000013735
Sarcophilus harrisii
ENSSHAG00000013735
I
0.858
TCF3
Sus scrofa
ENSSSCG00000013437
I
0.858
ENSSTOG00000010293
Ictidomys tridecemlineatus
ENSSTOG00000010293
I
0.858
TCF3
Taeniopygia guttata
ENSTGUG00000000208
I
0.858
tcf3b
Takifugu rubripes
ENSTRUG00000017901
I
0.858
ENSXMAG00000006665
Xiphophorus maculatus
ENSXMAG00000006665
I
0.858
Aan_R011701
Calypte anna
Aan_R011701
I
0.858
Afo_R010055
Aptenodytes forsteri
Afo_R010055
I
0.858
Brh_R007211
Buceros rhinoceros
Brh_R007211
I
0.858
Cmyd_10006706
Chelonia mydas
Cmyd_10006706
I
0.858
ENSBTAP00000028599-D1
Bos grunniens
ENSBTAP00000028599-D1
I
0.858
ENSP00000378813
Macaca fascicularis
ENSP00000378813
I
0.858
Gfo_R007595
Geospiza fortis
Gfo_R007595
I
0.858
Ogr01318
Ophisaurus gracilis
Ogr01318
I
0.858
Pvit_09822
Pogona vitticeps
Pvit_09822
I
0.858
AAA92050
Xenopus laevis
AAA92050
I
0.858
AAH44064
Xenopus laevis
AAH44064
I
0.858
tcf3
Xenopus tropicalis
XB-GENE-478265
I
0.858
tcf3a
Tetraodon nigroviridis
ENSTNIG00000015322
I
0.856
tcf3a
Takifugu rubripes
ENSTRUG00000008147
I
0.856
HelroG138065
Helobdella robusta
HelroG138065
N
0.842