CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HmN_000553800
(
Hymenolepis microstoma
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
HmN_000553800
T054129_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nau
M03600_2.00
Drosophila melanogaster
DBAACAGCTGTYVH
DBRACAGCTGTTVH
SELEX
Nitta et al.(2015)
nau_1
0.880
0.885
nau
M03601_2.00
Drosophila melanogaster
NBRACAGCTGACRC
GYGTCAGCTGTYVN
SELEX
Nitta et al.(2015)
nau_2
0.880
0.885
nau
M03602_2.00
Drosophila melanogaster
RCGWCAGCTGWCGC
GCGWCAGCTGWCGY
SELEX
Nitta et al.(2015)
nau_3
0.880
0.885
nau
M05949_2.00
Drosophila melanogaster
CACCTGYY
RRCAGGTG
B1H
Zhu et al.(2011)
nau_da_SANGER_5_FBgn0002922
0.880
0.885
nau
M05950_2.00
Drosophila melanogaster
RACASCTGACGC
GCGTCAGSTGTY
B1H
Zhu et al.(2011)
nau_SANGER_5_FBgn0002922
0.880
0.885
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HmN_000553800
bHLH
360
411
RRKAATMRERRRLRKVNEAFETLKRRTCSNPNQRMPKVEILRTAIDYIENLE
Links
Other
bHLH
family TFs
Other
Hymenolepis microstoma
TFs
56 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ECANG7_02004
Echinococcus canadensis
ECANG7_02004
I
0.914
EmuJ_001053100
Echinococcus multilocularis
EmuJ_001053100
I
0.914
HNAJ_0001324201
Hymenolepis nana
HNAJ_0001324201
I
0.914
MCOS_0000168001
Mesocestoides corti
MCOS_0000168001
I
0.914
SPER_0001779001
Spirometra erinaceieuropaei
SPER_0001779001
I
0.914
SPER_0002215301
Spirometra erinaceieuropaei
SPER_0002215301
I
0.914
SSLN_0000613901
Schistocephalus solidus
SSLN_0000613901
I
0.914
TASK_0000583801
Taenia asiatica
TASK_0000583801
I
0.914
TsM_000079400
Taenia solium
TsM_000079400
I
0.914
Sjc_0011830
Schistosoma japonicum
Sjc_0011830
I
0.893
nau
Drosophila melanogaster
FBgn0002922
D
0.880
GA10192
Drosophila pseudoobscura
FBgn0070251
I
0.880
GF18746
Drosophila ananassae
FBgn0095763
I
0.880
GG12413
Drosophila erecta
FBgn0104701
I
0.880
GH13904
Drosophila grimshawi
FBgn0121380
I
0.880
GI24830
Drosophila mojavensis
FBgn0147551
I
0.880
GL13832
Drosophila persimilis
FBgn0151437
I
0.880
GM23547
Drosophila sechellia
FBgn0178413
I
0.880
GD18361
Drosophila simulans
FBgn0189889
I
0.880
GJ24474
Drosophila virilis
FBgn0211554
I
0.880
GK22777
Drosophila willistoni
FBgn0224749
I
0.880
GE23932
Drosophila yakuba
FBgn0241076
I
0.880
LCUP007809
Lucilia cuprina
LCUP007809
I
0.880
Smp_167400
Schistosoma mansoni
Smp_167400
I
0.863
SMU15001149
Schmidtea mediterranea
SMU15001149
I
0.863
A_07871
Schistosoma haematobium
A_07871
I
0.863
csin100742
Clonorchis sinensis
csin100742
I
0.863
D915_09890
Fasciola hepatica
D915_09890
I
0.863
ECPE_0001678601
Echinostoma caproni
ECPE_0001678601
I
0.863
T265_10140
Opisthorchis viverrini
T265_10140
I
0.863
TRE_0000306101
Trichobilharzia regenti
TRE_0000306101
I
0.863
PHUM424120
Pediculus humanus
PHUM424120
I
0.856
CapteG36721
Capitella teleta
CapteG36721
I
0.850
CGI_10007380
Crassostrea gigas
CGI_10007380
I
0.850
EFV52759
Trichinella spiralis
EFV52759
I
0.850
GB55306
Apis mellifera
GB55306
I
0.850
NV10294
Nasonia vitripennis
NV10294
I
0.850
RPRC009735
Rhodnius prolixus
RPRC009735
I
0.850
SPU_021119
Strongylocentrotus purpuratus
SPU_021119
I
0.850
TC015855
Tribolium castaneum
TC015855
I
0.850
YQE_11476
Dendroctonus ponderosae
YQE_11476
I
0.850
Cflo_03885--XP_001120527.1_APIME
Camponotus floridanus
Cflo_03885--XP_001120527.1_APIME
I
0.850
Hsal_05065--XP_001120527.1_APIME
Harpegnathos saltator
Hsal_05065--XP_001120527.1_APIME
I
0.850
fgenesh2_pg.scaffold_226000031
Branchiostoma floridae
fgenesh2_pg.scaffold_226000031
I
0.850
fgenesh2_pg.scaffold_226000032
Branchiostoma floridae
fgenesh2_pg.scaffold_226000032
I
0.850
fgenesh2_pg.scaffold_29000123
Branchiostoma floridae
fgenesh2_pg.scaffold_29000123
I
0.850
Ocbimv22002759m.g
Octopus bimaculoides
Ocbimv22002759m.g
I
0.850
CLEC002330
Cimex lectularius
CLEC002330
I
0.850
LDEC009949
Leptinotarsa decemlineata
LDEC009949
I
0.850
LLOJ004446
Lutzomyia longipalpis
LLOJ004446
I
0.850
D917_06339
Trichinella nativa
D917_06339
I
0.850
D918_04086
Trichuris suis
D918_04086
I
0.850
nRc.2.0.1.g24248
Romanomermis culicivorax
nRc.2.0.1.g24248
I
0.850
SBAD_0001285401
Soboliphyme baturini
SBAD_0001285401
I
0.850
TMUE_s0045001800
Trichuris muris
TMUE_s0045001800
I
0.850
TTRE_0000002701
Trichuris trichiura
TTRE_0000002701
I
0.850