CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
snap_masked-nMf.1.1.scaf22292-processed-gene-0.2
(
Meloidogyne floridensis
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
snap_masked-nMf.1.1.scaf22292-processed-gene-0.2
T054956_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
snap_masked-nMf.1.1.scaf22292-processed-gene-0.2-mRNA-1
bHLH
73
105
RRTAHNLIEKKYRCSINDRINQLKEMLATEDNT
Links
Other
bHLH
family TFs
Other
Meloidogyne floridensis
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SVUK_0000364301
Strongylus vulgaris
SVUK_0000364301
N
0.884
SREBF2
Ochotona princeps
ENSOPRG00000008570
N
0.854
SREBF2
Vicugna pacos
ENSVPAG00000001280
N
0.854