CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Minc03820
(
Meloidogyne incognita
)
Brinker
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF09607 (BrkDBD)
IPR018586
Minc03820
T055796_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Minc03820
Brinker
199
249
LKLYAAEEKTDIIDYAKCIGNRAAGREFNVAESSIREWRKNEEKIRKQAET
Links
Other
Brinker
family TFs
Other
Meloidogyne incognita
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MhA1_Contig468.frz3.gene12
Meloidogyne hapla
MhA1_Contig468.frz3.gene12
N
1.000
Minc08655
Meloidogyne incognita
Minc08655
N
0.981
snap_masked-nMf.1.1.scaf42701-processed-gene-0.2
Meloidogyne floridensis
snap_masked-nMf.1.1.scaf42701-processed-gene-0.2
N
0.981
GPLIN_000992900
Globodera pallida
GPLIN_000992900
N
0.808
L893_g17711
Steinernema glaseri
L893_g17711
N
0.769
L889_g9935
Steinernema feltiae
L889_g9935
N
0.750
L898_g18025
Steinernema monticolum
L898_g18025
N
0.750
BXY_0367500
Bursaphelenchus xylophilus
BXY_0367500
N
0.745
L892_g11291
Steinernema scapterisci
L892_g11291
N
0.745
nDi.2.2.2.g11238
Dirofilaria immitis
nDi.2.2.2.g11238
I
0.742
ASIM_0001398401
Anisakis simplex
ASIM_0001398401
N
0.720
GPUH_0001120501
Gongylonema pulchrum
GPUH_0001120501
N
0.720
WUBG_06876
Wuchereria bancrofti
WUBG_06876
N
0.706
Bm6553
Brugia malayi
Bm6553
N
0.706
WBGene00242919
Onchocerca volvulus
WBGene00242919
N
0.706
nLs.2.1.2.g08792
Litomosoides sigmodontis
nLs.2.1.2.g08792
N
0.706
TCLT_0000958101
Thelazia callipaeda
TCLT_0000958101
N
0.706