CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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RO3G_11082
(
Rhizopus oryzae
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
RO3G_11082
T056213_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
asl-1
M01147_2.00
Neurospora crassa
NVTKACGHNN
NNDCGTMABN
PBM
Lambert et al.(2019)
pTH8918
0.886
0.672
Atf7
M01823_2.00
Mus musculus
HKACGTMAYN
NRTKACGTMD
PBM
Weirauch et al.(2014)
pTH5081
0.797
0.484
Creb5
M02866_2.00
Mus musculus
NATGACGTCAYH
DRTGACGTCATN
SELEX
Jolma et al.(2013)
Creb5_1
0.794
0.500
CREB5
M04299_2.00
Homo sapiens
NVTKACRTMABN
NVTKAYGTMABN
SELEX
Yin et al.(2017)
CREB5_eDBD_HT-SELEX
0.794
0.500
CREB5
M04301_2.00
Homo sapiens
NRTKACGTMAYN
NRTKACGTMAYN
SELEX
Yin et al.(2017)
CREB5_FL_HT-SELEX
0.794
0.500
CREB5
M04300_2.00
Homo sapiens
NRTKACRTCAYN
NRTGAYGTMAYN
SELEX
Yin et al.(2017)
CREB5_eDBD_Methyl-HT-SELEX
0.794
0.500
CREB5
M04302_2.00
Homo sapiens
NATGACRTCAYN
NRTGAYGTCATN
SELEX
Yin et al.(2017)
CREB5_FL_Methyl-HT-SELEX
0.794
0.500
Atf2
M01808_2.00
Mus musculus
NRTKAYGYMD
HKRCRTMAYN
PBM
Weirauch et al.(2014)
pTH5083
0.783
0.484
Atf2
M08827_2.00
Mus musculus
VTGACVTCABY
RVTGABGTCAB
Misc
Kulakovskiy et al.(2013)
ATF2_MOUSE.H11MO.0.A
0.783
0.484
Atf2
M09493_2.00
Mus musculus
NNVTGABVTCAB
VTGABVTCABNN
Misc
Heinz et al.(2010)
3T3L1-Atf2_GSE56872
0.783
0.484
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
RO3T_11081
bZIP
209
272
EDDEKRKNFLERNRIAALKCRQRKKQWLSNLQAKVEFLTNDNERLQLQSESLKEEIVNLKTLLL
Links
Other
bZIP
family TFs
Other
Rhizopus oryzae
TFs
474 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O5_05252
Cladophialophora psammophila
A1O5_05252
N
A1O7_06657
Cladophialophora yegresii
A1O7_06657
N
G647_05888
Cladophialophora carrionii
G647_05888
N
PV04_07050
Capronia semiimmersa
PV04_07050
N
PV07_03233
Cladophialophora immunda
PV07_03233
N
Z517_05454
Fonsecaea pedrosoi
Z517_05454
N