CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
AMTR_s00030p00014690
(
Amborella trichopoda
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
AMTR_s00030p00014690
T056749_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK27109.1
M01163_2.00
Cannabis sativa
KACAGCTR
YAGCTGTM
PBM
Lambert et al.(2019)
pTH10158
0.855
0.952
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ERN15989
bZIP
139
200
DPKRAKRILANRQSAARSKERKIRYTSELERKVQTLQTEATTLSAQLTLLQRDTTGLTQENK
Links
Other
bZIP
family TFs
Other
Amborella trichopoda
TFs
64 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy