Bo1g007700 (Brassica oleracea)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 Bo1g007700 T057245_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ABF3
M01782_2.00 		Arabidopsis thaliana
ACACGTGT
ACACGTGT		 PBM
Weirauch et al.(2014)
pTH7240 		0.856 0.903
ABF3
M09912_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF3_Q2 		0.856 0.903
ABF4
M01056_2.00 		Arabidopsis thaliana
NNMCACGTGKNN
NNMCACGTGKNN		 PBM
Sullivan et al.(2014)
pTH7315 		0.817 0.645
ABF4
M01057_2.00 		Arabidopsis thaliana
NDMYAVNWNN
NNWNBTRKHN		 PBM
Sullivan et al.(2014)
pTH7551 		0.817 0.645
ABF4
M09911_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF4_Q2 		0.817 0.645
OS08G0471950
M10047_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TRAB1_Q2 		0.817 0.613
ABF2
M01771_2.00 		Arabidopsis thaliana
NNYACGTGTHNNN
NNNDACACGTRNN		 PBM
Weirauch et al.(2014)
pTH8103 		0.813 0.645
ABF2
M06755_2.00 		Arabidopsis thaliana
NNWNNTGMCACGTSWBMH
DKVWSACGTGKCANNWNN		 Dap-seq
OMalley et al.(2016)
ABF2_col_v3a 		0.813 0.645
PK18009.1
M01158_2.00 		Cannabis sativa
NNACACGTGN
NCACGTGTNN		 PBM
Lambert et al.(2019)
pTH10272 		0.807 0.661
ABF1
M01772_2.00 		Arabidopsis thaliana
NNMCACGTGNN
NNCACGTGKNN		 PBM
Weirauch et al.(2014)
pTH8837 		0.806 0.613
ABF1
M01773_2.00 		Arabidopsis thaliana
NMCACGTGKN
NMCACGTGKN		 PBM
Weirauch et al.(2014)
pTH8853 		0.806 0.613
ABF1
M02656_2.00 		Arabidopsis thaliana
BBBBBBBBGCCACGTGDYC
GRHCACGTGGCVVVVVVVV		 SELEX
Mathelier et al.(2014)
MA0570.1 		0.806 0.613
ABF1
M09906_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF1_01 		0.806 0.613
ABF1
M09907_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF1_02 		0.806 0.613
ABF1
M09908_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF1_03 		0.806 0.613
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo1g007700.1 bZIP 336 398

Links

Other bZIP family TFs
Other Brassica oleracea TFs

252 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ABF3 Arabidopsis thaliana AT4G34000 D 0.856
ABF3 Arabidopsis lyrata fgenesh2_kg.7__705__AT4G34000.1 I 0.856
Bostr.7867s1253 Boechera stricta Bostr.7867s1253 I 0.856
Cagra.1305s0026 Capsella grandiflora Cagra.1305s0026 I 0.856
Carubv10006251m.g Capsella rubella Carubv10006251m.g I 0.856
Thhalv10025203m.g Eutrema salsugineum Thhalv10025203m.g I 0.849
GSMUA_Achr5G24570_001 Musa acuminata GSMUA_Achr5G24570_001 I 0.839
GSMUA_Achr6G30550_001 Musa acuminata GSMUA_Achr6G30550_001 I 0.839
PGSC0003DMG400022931 Solanum tuberosum PGSC0003DMG400022931 I 0.838
Solyc11g044560.1 Solanum lycopersicum Solyc11g044560.1 I 0.838
OB08G24950 Oryza brachyantha OB08G24950 I 0.837
MTR_3g101780 Medicago truncatula MTR_3g101780 I 0.836
AMTR_s00132p00065700 Amborella trichopoda AMTR_s00132p00065700 I 0.834
GLYMA04G04170 Glycine max GLYMA04G04170 I 0.834
GLYMA06G04353 Glycine max GLYMA06G04353 I 0.834
PGSC0003DMG400008011 Solanum tuberosum PGSC0003DMG400008011 I 0.834
Ca_01548 Cicer arietinum Ca_01548 I 0.834
evm.TU.supercontig_49.26 Carica papaya evm.TU.supercontig_49.26 I 0.834
orange1.1g021624m.g Citrus sinensis orange1.1g021624m.g I 0.834
29801.m003176 Ricinus communis 29801.m003176 I 0.833
Ciclev10001159m.g Citrus clementina Ciclev10001159m.g I 0.833
orange1.1g025340m.g Citrus sinensis orange1.1g025340m.g I 0.833
POPTR_0002s12710 Populus trichocarpa POPTR_0002s12710 I 0.832
POPTR_0014s02810 Populus trichocarpa POPTR_0014s02810 I 0.832
30170.m013868 Ricinus communis 30170.m013868 I 0.832
cassava12275.valid.m1 Manihot esculenta cassava12275.valid.m1 I 0.832
cassava42669.valid.m1 Manihot esculenta cassava42669.valid.m1 I 0.832
Eucgr.F02337 Eucalyptus grandis Eucgr.F02337 I 0.832
SapurV1A.0167s0060 Salix purpurea SapurV1A.0167s0060 I 0.832
SapurV1A.0878s0160 Salix purpurea SapurV1A.0878s0160 I 0.832
Bo7g116570 Brassica oleracea Bo7g116570 I 0.831
ABF2 Vitis vinifera VIT_18s0001g10450 I 0.831
PK02169.1 Cannabis sativa PK02169.1 I 0.831
gene09110-v1.0-hybrid Fragaria vesca gene09110-v1.0-hybrid I 0.830
GRMZM2G002075 Zea mays GRMZM2G002075 I 0.829
Ciclev10028435m.g Citrus clementina Ciclev10028435m.g I 0.828
Gorai.005G237400 Gossypium raimondii Gorai.005G237400 I 0.828
orange1.1g013197m.g Citrus sinensis orange1.1g013197m.g I 0.828
BGIOSGA030899 Oryza indica BGIOSGA030899 I 0.827
OGLUM09G13130 Oryza glumaepatula OGLUM09G13130 I 0.827
OMERI09G10130 Oryza meridionalis OMERI09G10130 I 0.827
OPUNC09G11090 Oryza punctata OPUNC09G11090 I 0.827
ORGLA09G0097200 Oryza glaberrima ORGLA09G0097200 I 0.827
OS09G0456200 Oryza sativa OS09G0456200 I 0.827
mgf020824m Mimulus guttatus mgf020824m I 0.826
GRMZM2G157722 Zea mays GRMZM2G157722 I 0.825
GRMZM2G478417 Zea mays GRMZM2G478417 I 0.825
Gorai.005G102300 Gossypium raimondii Gorai.005G102300 I 0.823
LPERR09G09170 Leersia perrieri LPERR09G09170 I 0.822
Sb04g034190 Sorghum bicolor Sb04g034190 I 0.822
Sb07g022965 Sorghum bicolor Sb07g022965 I 0.822
VIT_03s0063g00310 Vitis vinifera VIT_03s0063g00310 I 0.822
BGIOSGA028831 Oryza indica BGIOSGA028831 I 0.820
LPERR08G14740 Leersia perrieri LPERR08G14740 I 0.820
OPUNC08G15700 Oryza punctata OPUNC08G15700 I 0.820
ORGLA08G0211300 Oryza glaberrima ORGLA08G0211300 I 0.820
ORUFI08G19970 Oryza rufipogon ORUFI08G19970 I 0.820
OGLUM08G18640 Oryza glumaepatula OGLUM08G18640 I 0.819
Bostr.19424s0732 Boechera stricta Bostr.19424s0732 I 0.819
MDP0000296303 Malus domestica MDP0000296303 I 0.819
GRMZM2G033413 Zea mays GRMZM2G033413 I 0.818
GSMUA_Achr6G04270_001 Musa acuminata GSMUA_Achr6G04270_001 I 0.818
Sb06g026410 Sorghum bicolor Sb06g026410 I 0.818
Si006889m.g Setaria italica Si006889m.g I 0.818
Solyc04g078840.2 Solanum lycopersicum Solyc04g078840.2 I 0.818
29625.m000702 Ricinus communis 29625.m000702 I 0.818
Lus10014194.g Linum usitatissimum Lus10014194.g I 0.818
Lus10022720.g Linum usitatissimum Lus10022720.g I 0.818
Pavir.Da01931 Panicum virgatum Pavir.Da01931 I 0.818
ABF4 Arabidopsis thaliana AT3G19290 D 0.817
BRADI3G38200 Brachypodium distachyon BRADI3G38200 I 0.817
ABF4 Arabidopsis lyrata fgenesh2_kg.3__2145__AT3G19290.1 I 0.817
OS08G0471950 Oryza sativa OS08G0471950 D 0.817
Cagra.4978s0002 Capsella grandiflora Cagra.4978s0002 I 0.817
Carubv10013729m.g Capsella rubella Carubv10013729m.g I 0.817
Pavir.J00256 Panicum virgatum Pavir.J00256 I 0.817
Si030114m.g Setaria italica Si030114m.g I 0.816
LjT07K13.110.nd Lotus japonicus LjT07K13.110.nd I 0.815
Bo5g115300 Brassica oleracea Bo5g115300 I 0.814
Bra022409 Brassica rapa Bra022409 I 0.814
Bra037533 Brassica rapa Bra037533 I 0.814
Thhalv10020772m.g Eutrema salsugineum Thhalv10020772m.g I 0.814
ABF2 Arabidopsis thaliana AT1G45249 D 0.813
Bo6g006970 Brassica oleracea Bo6g006970 I 0.813
Bra040260 Brassica rapa Bra040260 I 0.813
ABF2 Arabidopsis lyrata fgenesh2_kg.1__3804__AT1G45249.1 I 0.813
Thhalv10011493m.g Eutrema salsugineum Thhalv10011493m.g I 0.813
PRUPE_ppa006752mg Prunus persica PRUPE_ppa006752mg I 0.812
Pm021430 Prunus mume Pm021430 I 0.812
evm.TU.supercontig_62.4 Carica papaya evm.TU.supercontig_62.4 I 0.812
gene28250-v1.0-hybrid Fragaria vesca gene28250-v1.0-hybrid I 0.812
SapurV1A.0643s0160 Salix purpurea SapurV1A.0643s0160 I 0.812
SapurV1A.3185s0030 Salix purpurea SapurV1A.3185s0030 I 0.812
GSMUA_Achr3G07000_001 Musa acuminata GSMUA_Achr3G07000_001 I 0.811
PRUPE_ppa006503mg Prunus persica PRUPE_ppa006503mg I 0.811
Sb08g003760 Sorghum bicolor Sb08g003760 I 0.811
TCM_033824 Theobroma cacao TCM_033824 I 0.811
AMTR_s00114p00031980 Amborella trichopoda AMTR_s00114p00031980 I 0.810
OLONG_000475 Oryza longistaminata OLONG_000475 I 0.810
ONIVA08G19830 Oryza nivara ONIVA08G19830 I 0.810
PGSC0003DMG400025889 Solanum tuberosum PGSC0003DMG400025889 I 0.810
Solyc01g108080.2 Solanum lycopersicum Solyc01g108080.2 I 0.810
TCM_007074 Theobroma cacao TCM_007074 I 0.810
Cucsa.396070 Cucumis sativus Cucsa.396070 I 0.810
mgf002047m Mimulus guttatus mgf002047m I 0.810
mgf007524m Mimulus guttatus mgf007524m I 0.810
mgf014602m Mimulus guttatus mgf014602m I 0.810
Gorai.013G044500 Gossypium raimondii Gorai.013G044500 I 0.810
MDP0000248567 Malus domestica MDP0000248567 I 0.810
TRAES3BF099600130CFD_g Triticum aestivum TRAES3BF099600130CFD_g I 0.809
Pm001315 Prunus mume Pm001315 I 0.809
PGSC0003DMG400006211 Solanum tuberosum PGSC0003DMG400006211 I 0.808
ORUFI12G20810 Oryza rufipogon ORUFI12G20810 I 0.807
BZIP46 Oryza sativa OS06G0211200 I 0.807
Gorai.009G212600 Gossypium raimondii Gorai.009G212600 I 0.807
Gorai.009G275700 Gossypium raimondii Gorai.009G275700 I 0.807
PK18009.1 Cannabis sativa PK18009.1 D 0.807
ABF1 Arabidopsis thaliana AT1G49720 D 0.806
Cla022926 Citrullus lanatus Cla022926 I 0.806
Bra011485 Brassica rapa Bra011485 I 0.805
F775_32479 Aegilops tauschii F775_32479 I 0.805
MLOC_34679 Hordeum vulgare MLOC_34679 I 0.805
Traes_3AL_FC5523394 Triticum aestivum Traes_3AL_FC5523394 I 0.805
TRAES3BF111600130CFD_g Triticum aestivum TRAES3BF111600130CFD_g I 0.805
TRIUR3_31111 Triticum urartu TRIUR3_31111 I 0.805
Cucsa.219780 Cucumis sativus Cucsa.219780 I 0.805
Pavir.Fa00674 Panicum virgatum Pavir.Fa00674 I 0.804
BGIOSGA004837 Oryza indica BGIOSGA004837 I 0.803
Bo3g073080 Brassica oleracea Bo3g073080 I 0.803
ABF1 Arabidopsis lyrata fgenesh2_kg.1__4055__AT1G49720.1 I 0.803
LPERR01G32620 Leersia perrieri LPERR01G32620 I 0.803
OB01G46760 Oryza brachyantha OB01G46760 I 0.803
OBART01G37980 Oryza barthii OBART01G37980 I 0.803
OGLUM01G42150 Oryza glumaepatula OGLUM01G42150 I 0.803
OLONG_014546 Oryza longistaminata OLONG_014546 I 0.803
OMERI01G34950 Oryza meridionalis OMERI01G34950 I 0.803
ONIVA04G25730 Oryza nivara ONIVA04G25730 I 0.803
ORGLA01G0317900 Oryza glaberrima ORGLA01G0317900 I 0.803
ORUFI01G41310 Oryza rufipogon ORUFI01G41310 I 0.803
OS01G0859300 Oryza sativa OS01G0859300 I 0.803
Si013904m.g Setaria italica Si013904m.g I 0.803
Cla016272 Citrullus lanatus Cla016272 I 0.803
Cagra.2481s0016 Capsella grandiflora Cagra.2481s0016 I 0.803
Thhalv10012271m.g Eutrema salsugineum Thhalv10012271m.g I 0.803
GRMZM2G168079 Zea mays GRMZM2G168079 I 0.802
GSMUA_Achr3G22710_001 Musa acuminata GSMUA_Achr3G22710_001 I 0.802
GSMUA_Achr9G27130_001 Musa acuminata GSMUA_Achr9G27130_001 I 0.802
OB09G19140 Oryza brachyantha OB09G19140 I 0.802
Sb10g007090 Sorghum bicolor Sb10g007090 I 0.802
Pavir.J35078 Panicum virgatum Pavir.J35078 I 0.802
OBART08G17810 Oryza barthii OBART08G17810 I 0.801
TRAES3BF111600160CFD_g Triticum aestivum TRAES3BF111600160CFD_g I 0.801
cassava42743.valid.m1 Manihot esculenta cassava42743.valid.m1 I 0.801
cassava42744.valid.m1 Manihot esculenta cassava42744.valid.m1 I 0.801
cassava42745.valid.m1 Manihot esculenta cassava42745.valid.m1 I 0.801
Cagra.10917s0002 Capsella grandiflora Cagra.10917s0002 I 0.801
Carubv10009177m.g Capsella rubella Carubv10009177m.g I 0.801
Gorai.008G024700 Gossypium raimondii Gorai.008G024700 I 0.801
Pavir.Ba02029 Panicum virgatum Pavir.Ba02029 I 0.801
ABI5 Arabidopsis thaliana AT2G36270 D 0.800
GSMUA_Achr5G05690_001 Musa acuminata GSMUA_Achr5G05690_001 I 0.800
Lus10014066.g Linum usitatissimum Lus10014066.g I 0.800
Lus10027897.g Linum usitatissimum Lus10027897.g I 0.800
GLYMA13G22061 Glycine max GLYMA13G22061 I 0.799
MLOC_66546 Hordeum vulgare MLOC_66546 I 0.799
Bra018800 Brassica rapa Bra018800 I 0.798
cassava11518.m1 Manihot esculenta cassava11518.m1 I 0.798
Lus10002399.g Linum usitatissimum Lus10002399.g I 0.798
Lus10009755.g Linum usitatissimum Lus10009755.g I 0.798
Lus10017049.g Linum usitatissimum Lus10017049.g I 0.798
Pavir.Fb01750 Panicum virgatum Pavir.Fb01750 I 0.798
POPTR_0009s10400 Populus trichocarpa POPTR_0009s10400 I 0.797
mgf002176m Mimulus guttatus mgf002176m I 0.797
GSMUA_Achr8G07740_001 Musa acuminata GSMUA_Achr8G07740_001 I 0.796
ABI5 Populus trichocarpa POPTR_0006s08300 I 0.795
TCM_022574 Theobroma cacao TCM_022574 I 0.795
TRIUR3_33995 Triticum urartu TRIUR3_33995 I 0.795
Pavir.J31353 Panicum virgatum Pavir.J31353 I 0.795
Solyc10g050210.1 Solanum lycopersicum Solyc10g050210.1 I 0.793
DPBF2 Vitis vinifera VIT_06s0080g00340 I 0.793
Aquca_072_00142 Aquilegia coerulea Aquca_072_00142 I 0.793
Lus10006489.g Linum usitatissimum Lus10006489.g I 0.793
OLONG_001053 Oryza longistaminata OLONG_001053 I 0.792
PGSC0003DMG400002660 Solanum tuberosum PGSC0003DMG400002660 I 0.792
POPTR_0009s16610 Populus trichocarpa POPTR_0009s16610 I 0.792
VIT_18s0001g04500 Vitis vinifera VIT_18s0001g04500 I 0.792
Pm005288 Prunus mume Pm005288 I 0.792
30055.m001548 Ricinus communis 30055.m001548 I 0.792
cassava16074.m1 Manihot esculenta cassava16074.m1 I 0.792
SapurV1A.0374s0070 Salix purpurea SapurV1A.0374s0070 I 0.792
OPUNC05G18710 Oryza punctata OPUNC05G18710 I 0.791
SELMODRAFT_266892 Selaginella moellendorffii SELMODRAFT_266892 I 0.791
Gorai.002G240500 Gossypium raimondii Gorai.002G240500 I 0.791
orange1.1g037676m.g Citrus sinensis orange1.1g037676m.g I 0.791
SELMODRAFT_91900 Selaginella moellendorffii SELMODRAFT_91900 I 0.790
SELMODRAFT_94516 Selaginella moellendorffii SELMODRAFT_94516 I 0.790
Si017618m.g Setaria italica Si017618m.g I 0.790
GLYMA19G37910 Glycine max GLYMA19G37910 I 0.789
chr1.CM0010.310.nd Lotus japonicus chr1.CM0010.310.nd I 0.789
OPUNC01G36800 Oryza punctata OPUNC01G36800 I 0.787
SELMODRAFT_428822 Selaginella moellendorffii SELMODRAFT_428822 I 0.787
Ciclev10028635m.g Citrus clementina Ciclev10028635m.g I 0.787
Eucgr.G01436 Eucalyptus grandis Eucgr.G01436 I 0.787
Gorai.006G155600 Gossypium raimondii Gorai.006G155600 I 0.787
BGIOSGA022536 Oryza indica BGIOSGA022536 I 0.786
BGIOSGA040605 Oryza indica BGIOSGA040605 I 0.786
LPERR06G06440 Leersia perrieri LPERR06G06440 I 0.786
OB06G16510 Oryza brachyantha OB06G16510 I 0.786
OBART06G07070 Oryza barthii OBART06G07070 I 0.786
OGLUM06G07500 Oryza glumaepatula OGLUM06G07500 I 0.786
OMERI06G08210 Oryza meridionalis OMERI06G08210 I 0.786
ONIVA06G08350 Oryza nivara ONIVA06G08350 I 0.786
OPUNC06G06690 Oryza punctata OPUNC06G06690 I 0.786
ORGLA02G0292000 Oryza glaberrima ORGLA02G0292000 I 0.786
ORGLA06G0066000 Oryza glaberrima ORGLA06G0066000 I 0.786
TRIUR3_29638 Triticum urartu TRIUR3_29638 I 0.786
SapurV1A.0001s2050 Salix purpurea SapurV1A.0001s2050 I 0.786
MLOC_61490 Hordeum vulgare MLOC_61490 I 0.785
SELMODRAFT_227594 Selaginella moellendorffii SELMODRAFT_227594 I 0.785
SELMODRAFT_451399 Selaginella moellendorffii SELMODRAFT_451399 I 0.785
Traes_4AS_F9C171219 Triticum aestivum Traes_4AS_F9C171219 I 0.785
Traes_4BL_4C9A415F3 Triticum aestivum Traes_4BL_4C9A415F3 I 0.785
Traes_4DL_F38ED7FB6 Triticum aestivum Traes_4DL_F38ED7FB6 I 0.785
TRIUR3_15490 Triticum urartu TRIUR3_15490 I 0.785
Ca_06458 Cicer arietinum Ca_06458 I 0.785
mgf015092m Mimulus guttatus mgf015092m I 0.785
Bostr.12302s0127 Boechera stricta Bostr.12302s0127 I 0.785
evm.TU.supercontig_5.28 Carica papaya evm.TU.supercontig_5.28 I 0.785
EEL Arabidopsis thaliana AT2G41070 I 0.784
Bo4g012940 Brassica oleracea Bo4g012940 I 0.784
EEL Arabidopsis lyrata fgenesh2_kg.4__2235__AT2G41070.2 I 0.784
GLYMA04G14840 Glycine max GLYMA04G14840 I 0.784
GLYMA07G33600 Glycine max GLYMA07G33600 I 0.784
GSMUA_Achr2G20490_001 Musa acuminata GSMUA_Achr2G20490_001 I 0.784
Sb03g040510 Sorghum bicolor Sb03g040510 I 0.784
Si001731m.g Setaria italica Si001731m.g I 0.784
Solyc09g009490.2 Solanum lycopersicum Solyc09g009490.2 I 0.784
Cucsa.241090 Cucumis sativus Cucsa.241090 I 0.784
Bostr.26675s0197 Boechera stricta Bostr.26675s0197 I 0.784
Bostr.9345s0024 Boechera stricta Bostr.9345s0024 I 0.784
MDP0000701734 Malus domestica MDP0000701734 I 0.784
Thhalv10017050m.g Eutrema salsugineum Thhalv10017050m.g I 0.784
PGSC0003DMG400007208 Solanum tuberosum PGSC0003DMG400007208 I 0.783
cassava32856.m1 Manihot esculenta cassava32856.m1 I 0.783
Aquca_009_00009 Aquilegia coerulea Aquca_009_00009 I 0.783
Cagra.1642s0072 Capsella grandiflora Cagra.1642s0072 I 0.783
Carubv10023893m.g Capsella rubella Carubv10023893m.g I 0.783
GLYMA06G47220 Glycine max GLYMA06G47220 I 0.782
GLYMA10G08370 Glycine max GLYMA10G08370 I 0.782
TCM_044596 Theobroma cacao TCM_044596 I 0.782
Cla017970 Citrullus lanatus Cla017970 I 0.782
Carubv10009399m.g Capsella rubella Carubv10009399m.g I 0.782