CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo4g183320
(
Brassica oleracea
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
Bo4g183320
T057302_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
BZIP16
M06764_2.00
Arabidopsis thaliana
DDWKVYSACGTGGCA
TGCCACGTSRBMWHH
Dap-seq
OMalley et al.(2016)
bZIP16_colamp_a
0.856
0.859
BZIP16
M06765_2.00
Arabidopsis thaliana
DDWKVHSACGTGGCA
TGCCACGTSDBMWHH
Dap-seq
OMalley et al.(2016)
bZIP16_col_v3a
0.856
0.859
BZIP68
M01770_2.00
Arabidopsis thaliana
BMCASGBND
HNVCSTGKV
PBM
Weirauch et al.(2014)
pTH8192
0.838
0.812
BZIP68
M06752_2.00
Arabidopsis thaliana
DNWKNHSACGTGGCR
YGCCACGTSDNMWNH
Dap-seq
OMalley et al.(2016)
bZIP68_col_a
0.838
0.812
GBF1
M01783_2.00
Arabidopsis thaliana
HBACGTGKMN
NKMCACGTVD
PBM
Weirauch et al.(2014)
pTH7259
0.820
0.656
GBF1
M09913_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GBF1_01
0.820
0.656
GBF1
M09914_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GBF1F_Q2
0.820
0.656
GBF1
M09915_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GBF1_Q2_01
0.820
0.656
GBF1
M09916_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GBF1_Q2
0.820
0.656
PK23964.1
M01160_2.00
Cannabis sativa
DNKMCACGTV
BACGTGKMNH
PBM
Lambert et al.(2019)
pTH10151
0.806
0.734
CPRF1_PETCR
M10066_2.00
Petroselinum crispum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CPRF1_01
0.791
0.578
CPRF1_PETCR
M10067_2.00
Petroselinum crispum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CPRF1_Q2
0.791
0.578
CPRF1_PETCR
M10068_2.00
Petroselinum crispum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CPRF_Q2
0.791
0.578
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo4g183320.1
bZIP
154
221
ESCLSRQRRKQSNRESARRSRLRKQAECDELAQRAEVLNEENASLREEINKLRSQCEELTSENTSLNS
Links
Other
bZIP
family TFs
Other
Brassica oleracea
TFs
158 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo4g038560
Brassica oleracea
Bo4g038560
I
0.868
BZIP16
Arabidopsis thaliana
AT2G35530
D
0.856
Bra005335
Brassica rapa
Bra005335
I
0.856
Bostr.23794s0549
Boechera stricta
Bostr.23794s0549
I
0.856
AMTR_s00059p00094730
Amborella trichopoda
AMTR_s00059p00094730
I
0.851
Cla014415
Citrullus lanatus
Cla014415
I
0.851
Cucsa.104970
Cucumis sativus
Cucsa.104970
I
0.851
PGSC0003DMG400012660
Solanum tuberosum
PGSC0003DMG400012660
I
0.846
Solyc02g085610.2
Solanum lycopersicum
Solyc02g085610.2
I
0.846
MDP0000231274
Malus domestica
MDP0000231274
I
0.846
PDK_20s1372692g002
Phoenix dactylifera
PDK_20s1372692g002
I
0.843
mgf000639m
Mimulus guttatus
mgf000639m
I
0.840
mgf005151m
Mimulus guttatus
mgf005151m
I
0.840
mgf014804m
Mimulus guttatus
mgf014804m
I
0.840
BZIP68
Arabidopsis thaliana
AT1G32150
D
0.838
bZIP68
Arabidopsis lyrata
fgenesh2_kg.1__3350__AT1G32150.1
I
0.838
Ca_15839
Cicer arietinum
Ca_15839
I
0.838
Cagra.3359s0011
Capsella grandiflora
Cagra.3359s0011
I
0.838
Thhalv10007879m.g
Eutrema salsugineum
Thhalv10007879m.g
I
0.838
Cagra.0993s0063
Capsella grandiflora
Cagra.0993s0063
I
0.837
MTR_8g070820
Medicago truncatula
MTR_8g070820
I
0.835
PRUPE_ppa008024mg
Prunus persica
PRUPE_ppa008024mg
I
0.835
Pm026586
Prunus mume
Pm026586
I
0.835
GBF1
Vitis vinifera
VIT_04s0023g01360
I
0.834
Ciclev10025963m.g
Citrus clementina
Ciclev10025963m.g
I
0.834
orange1.1g018605m.g
Citrus sinensis
orange1.1g018605m.g
I
0.834
Thhalv10016740m.g
Eutrema salsugineum
Thhalv10016740m.g
I
0.832
GLYMA02G06550
Glycine max
GLYMA02G06550
I
0.831
GLYMA16G25600
Glycine max
GLYMA16G25600
I
0.831
MTR_8g077950
Medicago truncatula
MTR_8g077950
I
0.831
Solyc02g062950.2
Solanum lycopersicum
Solyc02g062950.2
I
0.831
evm.TU.supercontig_158.7
Carica papaya
evm.TU.supercontig_158.7
I
0.831
Bostr.3359s0141
Boechera stricta
Bostr.3359s0141
I
0.826
TCM_000436
Theobroma cacao
TCM_000436
I
0.824
Gorai.008G068900
Gossypium raimondii
Gorai.008G068900
I
0.824
VIT_18s0001g12120
Vitis vinifera
VIT_18s0001g12120
I
0.823
GLYMA01G01740
Glycine max
GLYMA01G01740
I
0.822
Bo3g028300
Brassica oleracea
Bo3g028300
I
0.821
GBF1
Arabidopsis thaliana
AT4G36730
D
0.820
GBF1
Arabidopsis lyrata
scaffold_700433.1
I
0.820
Bostr.7867s1529
Boechera stricta
Bostr.7867s1529
I
0.820
Cagra.5996s0003
Capsella grandiflora
Cagra.5996s0003
I
0.820
Carubv10005287m.g
Capsella rubella
Carubv10005287m.g
I
0.820
GLYMA09G34170
Glycine max
GLYMA09G34170
I
0.817
MTR_5g028850
Medicago truncatula
MTR_5g028850
I
0.817
SELMODRAFT_135978
Selaginella moellendorffii
SELMODRAFT_135978
I
0.817
Cla008988
Citrullus lanatus
Cla008988
I
0.817
Cucsa.322110
Cucumis sativus
Cucsa.322110
I
0.817
mgf008605m
Mimulus guttatus
mgf008605m
I
0.817
Eucgr.H01256
Eucalyptus grandis
Eucgr.H01256
I
0.817
Gorai.003G185700
Gossypium raimondii
Gorai.003G185700
I
0.817
SapurV1A.0051s0250
Salix purpurea
SapurV1A.0051s0250
I
0.817
GLYMA16G15810
Glycine max
GLYMA16G15810
I
0.815
VIT_02s0012g02250
Vitis vinifera
VIT_02s0012g02250
I
0.815
Ca_11455
Cicer arietinum
Ca_11455
I
0.815
Cla016502
Citrullus lanatus
Cla016502
I
0.815
Eucgr.E00223
Eucalyptus grandis
Eucgr.E00223
I
0.815
SapurV1A.0817s0110
Salix purpurea
SapurV1A.0817s0110
I
0.815
chr2.LjT41P23.50.nc
Lotus japonicus
chr2.LjT41P23.50.nc
I
0.815
LjSGA_036158.1
Lotus japonicus
LjSGA_036158.1
I
0.815
PDK_20s1368181g001
Phoenix dactylifera
PDK_20s1368181g001
I
0.815
Bra010572
Brassica rapa
Bra010572
I
0.814
Lus10014324.g
Linum usitatissimum
Lus10014324.g
I
0.814
Lus10026033.g
Linum usitatissimum
Lus10026033.g
I
0.814
Thhalv10025733m.g
Eutrema salsugineum
Thhalv10025733m.g
I
0.814
Cucsa.312800
Cucumis sativus
Cucsa.312800
I
0.813
Ciclev10001333m.g
Citrus clementina
Ciclev10001333m.g
I
0.813
orange1.1g036551m.g
Citrus sinensis
orange1.1g036551m.g
I
0.813
Solyc08g076100.2
Solanum lycopersicum
Solyc08g076100.2
I
0.811
GLYMA01G38381
Glycine max
GLYMA01G38381
I
0.808
PGSC0003DMG400018469
Solanum tuberosum
PGSC0003DMG400018469
I
0.808
Solyc08g005290.2
Solanum lycopersicum
Solyc08g005290.2
I
0.808
evm.TU.supercontig_2741.1
Carica papaya
evm.TU.supercontig_2741.1
I
0.807
POPTR_0001s01840
Populus trichocarpa
POPTR_0001s01840
I
0.806
POPTR_0003s09630
Populus trichocarpa
POPTR_0003s09630
I
0.806
30068.m002661
Ricinus communis
30068.m002661
I
0.806
cassava11837.valid.m1
Manihot esculenta
cassava11837.valid.m1
I
0.806
cassava37043.valid.m1
Manihot esculenta
cassava37043.valid.m1
I
0.806
mgf008195m
Mimulus guttatus
mgf008195m
I
0.806
gene13716-v1.0-hybrid
Fragaria vesca
gene13716-v1.0-hybrid
I
0.806
MDP0000185553
Malus domestica
MDP0000185553
I
0.806
MDP0000286846
Malus domestica
MDP0000286846
I
0.806
SapurV1A.0063s0130
Salix purpurea
SapurV1A.0063s0130
I
0.806
PK23964.1
Cannabis sativa
PK23964.1
D
0.806
Bo1g005460
Brassica oleracea
Bo1g005460
I
0.805
Bra011701
Brassica rapa
Bra011701
I
0.805
mgf013375m
Mimulus guttatus
mgf013375m
I
0.805
Gorai.007G205700
Gossypium raimondii
Gorai.007G205700
I
0.805
BGIOSGA036419
Oryza indica
BGIOSGA036419
I
0.803
GLYMA08G34280
Glycine max
GLYMA08G34280
I
0.803
GRMZM2G074373
Zea mays
GRMZM2G074373
I
0.803
LPERR12G05920
Leersia perrieri
LPERR12G05920
I
0.803
OB12G16310
Oryza brachyantha
OB12G16310
I
0.803
OBART12G06770
Oryza barthii
OBART12G06770
I
0.803
OGLUM12G08090
Oryza glumaepatula
OGLUM12G08090
I
0.803
OLONG_021967
Oryza longistaminata
OLONG_021967
I
0.803
OMERI12G04560
Oryza meridionalis
OMERI12G04560
I
0.803
ONIVA12G06500
Oryza nivara
ONIVA12G06500
I
0.803
OPUNC12G06450
Oryza punctata
OPUNC12G06450
I
0.803
ORGLA12G0063500
Oryza glaberrima
ORGLA12G0063500
I
0.803
ORUFI12G07600
Oryza rufipogon
ORUFI12G07600
I
0.803
PRUPE_ppa006484mg
Prunus persica
PRUPE_ppa006484mg
I
0.803
Sb08g008300
Sorghum bicolor
Sb08g008300
I
0.803
Si022325m.g
Setaria italica
Si022325m.g
I
0.803
TCM_016606
Theobroma cacao
TCM_016606
I
0.803
Pm023132
Prunus mume
Pm023132
I
0.803
gene29546-v1.0-hybrid
Fragaria vesca
gene29546-v1.0-hybrid
I
0.803
Pavir.Ca00403
Panicum virgatum
Pavir.Ca00403
I
0.803
Pavir.Cb01814
Panicum virgatum
Pavir.Cb01814
I
0.803
MTR_7g116890
Medicago truncatula
MTR_7g116890
I
0.802
Ca_01293
Cicer arietinum
Ca_01293
I
0.802
GSMUA_Achr6G00170_001
Musa acuminata
GSMUA_Achr6G00170_001
I
0.799
Gorai.004G181900
Gossypium raimondii
Gorai.004G181900
I
0.799
gw2.11.550.1
Micromonas sp RCC299
gw2.11.550.1
I
0.799
PDK_20s1708971g001
Phoenix dactylifera
PDK_20s1708971g001
I
0.799
POPTR_0005s12750
Populus trichocarpa
POPTR_0005s12750
I
0.798
POPTR_0007s12460
Populus trichocarpa
POPTR_0007s12460
I
0.798
SapurV1A.0255s0070
Salix purpurea
SapurV1A.0255s0070
I
0.798
estExt_fgenesh1_pg.C_10522
Micromonas pusilla
estExt_fgenesh1_pg.C_10522
I
0.797
estExt_fgenesh2_pg.C_Chr_020452
Micromonas sp RCC299
estExt_fgenesh2_pg.C_Chr_020452
I
0.797
AMTR_s00048p00108400
Amborella trichopoda
AMTR_s00048p00108400
I
0.796
Aquca_037_00034
Aquilegia coerulea
Aquca_037_00034
I
0.796
29646.m001068
Ricinus communis
29646.m001068
I
0.795
cassava45491.m1
Manihot esculenta
cassava45491.m1
I
0.795
GRMZM2G019106
Zea mays
GRMZM2G019106
I
0.792
GRMZM2G153144
Zea mays
GRMZM2G153144
I
0.792
Sb04g002360
Sorghum bicolor
Sb04g002360
I
0.792
Si017637m.g
Setaria italica
Si017637m.g
I
0.792
Pavir.Aa03436
Panicum virgatum
Pavir.Aa03436
I
0.792
Pavir.Ab00132
Panicum virgatum
Pavir.Ab00132
I
0.792
PDK_20s1310372g001
Phoenix dactylifera
PDK_20s1310372g001
I
0.792
CPRF1_PETCR
Petroselinum crispum
CPRF1_PETCR
D
0.791
gw1.27.125.1
Physcomitrella patens
gw1.27.125.1
I
0.791
gene18928-v1.0-hybrid
Fragaria vesca
gene18928-v1.0-hybrid
I
0.791
chr1.CM0579.280.nd
Lotus japonicus
chr1.CM0579.280.nd
I
0.791
GRMZM2G088140
Zea mays
GRMZM2G088140
I
0.789
SapurV1A.0013s0770
Salix purpurea
SapurV1A.0013s0770
I
0.789
F775_32205
Aegilops tauschii
F775_32205
I
0.788
MLOC_63066
Hordeum vulgare
MLOC_63066
I
0.788
SELMODRAFT_125734
Selaginella moellendorffii
SELMODRAFT_125734
I
0.788
SELMODRAFT_129391
Selaginella moellendorffii
SELMODRAFT_129391
I
0.788
Traes_5AS_3A85F1C2C
Triticum aestivum
Traes_5AS_3A85F1C2C
I
0.788
Traes_5BL_A5532B750
Triticum aestivum
Traes_5BL_A5532B750
I
0.788
Traes_5BS_A5532B750
Triticum aestivum
Traes_5BS_A5532B750
I
0.788
Traes_5DL_C794C1EEA
Triticum aestivum
Traes_5DL_C794C1EEA
I
0.788
TRIUR3_34165
Triticum urartu
TRIUR3_34165
I
0.788
GLYMA03G41590
Glycine max
GLYMA03G41590
I
0.787
GLYMA19G44190
Glycine max
GLYMA19G44190
I
0.787
Lus10003034.g
Linum usitatissimum
Lus10003034.g
I
0.787
Lus10005146.g
Linum usitatissimum
Lus10005146.g
I
0.787
BGIOSGA007448
Oryza indica
BGIOSGA007448
I
0.786
OB02G12150
Oryza brachyantha
OB02G12150
I
0.786
ONIVA02G02170
Oryza nivara
ONIVA02G02170
I
0.786
OPUNC02G01690
Oryza punctata
OPUNC02G01690
I
0.786
ORGLA02G0021500
Oryza glaberrima
ORGLA02G0021500
I
0.786
OS02G0128200
Oryza sativa
OS02G0128200
I
0.786
Aquca_013_00209
Aquilegia coerulea
Aquca_013_00209
I
0.786
PDK_20s1568831g001
Phoenix dactylifera
PDK_20s1568831g001
I
0.784